RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 DHX57Q6P158 1386 aaKnown RBP24.95■■□□□ 1.59
SQLE-205ENST00000521232 SHPRHQ149N8 1683 aa24.95■■□□□ 1.58
SQLE-205ENST00000521232 DCAF11Q8TEB1 546 aa24.95■■□□□ 1.58
SQLE-205ENST00000521232 ORAI2Q96SN7 254 aa24.95■■□□□ 1.58
SQLE-205ENST00000521232 LRRC59Q96AG4 307 aaKnown RBP24.94■■□□□ 1.58
SQLE-205ENST00000521232 PLEKHH1Q9ULM0 1364 aa24.93■■□□□ 1.58
SQLE-205ENST00000521232 DDX17Q92841 729 aaKnown RBP24.93■■□□□ 1.58
SQLE-205ENST00000521232 KDM2AQ9Y2K7 1162 aa24.93■■□□□ 1.58
SQLE-205ENST00000521232 CDC42BPGQ6DT37 1551 aa24.93■■□□□ 1.58
SQLE-205ENST00000521232 LRP6O75581 1613 aa24.88■■□□□ 1.57
SQLE-205ENST00000521232 SOS2Q07890 1332 aaPredicted RBP24.87■■□□□ 1.57
SQLE-205ENST00000521232 ESCO1Q5FWF5 840 aa24.87■■□□□ 1.57
SQLE-205ENST00000521232 POTEAQ6S8J7 498 aa24.87■■□□□ 1.57
SQLE-205ENST00000521232 ADGRB1O14514 1584 aa24.85■■□□□ 1.57
SQLE-205ENST00000521232 PRAM1Q96QH2 718 aa24.84■■□□□ 1.57
SQLE-205ENST00000521232 DLC1Q96QB1 1528 aa24.84■■□□□ 1.57
SQLE-205ENST00000521232 MEX3CQ5U5Q3 659 aaKnown RBP24.83■■□□□ 1.57
SQLE-205ENST00000521232 PNPLA6Q8IY17 1366 aa24.82■■□□□ 1.56
SQLE-205ENST00000521232 NUTM2FA1L443 756 aa24.82■■□□□ 1.56
SQLE-205ENST00000521232 NUTM2BA6NNL0 878 aaPredicted RBP24.82■■□□□ 1.56
SQLE-205ENST00000521232 NUTM2EB1AL46 878 aaPredicted RBP24.82■■□□□ 1.56
SQLE-205ENST00000521232 NUTM2AQ8IVF1 878 aaPredicted RBP24.82■■□□□ 1.56
SQLE-205ENST00000521232 NPHP3Q7Z494 1330 aa24.81■■□□□ 1.56
SQLE-205ENST00000521232 FMN2Q9NZ56 1722 aa24.81■■□□□ 1.56
SQLE-205ENST00000521232 POGKQ9P215 609 aa24.8■■□□□ 1.56
SQLE-205ENST00000521232 TRAK1Q9UPV9 953 aa24.8■■□□□ 1.56
SQLE-205ENST00000521232 FOXO3O43524 673 aa24.78■■□□□ 1.56
SQLE-205ENST00000521232 SAFB2Q14151 953 aaKnown RBP eCLIP24.78■■□□□ 1.56
SQLE-205ENST00000521232 ZNF772Q68DY9 489 aaPredicted RBP24.77■■□□□ 1.56
SQLE-205ENST00000521232 PXDNQ92626 1479 aa24.75■■□□□ 1.55
SQLE-205ENST00000521232 RGPD8O14715 1765 aaPredicted RBP24.72■■□□□ 1.55
SQLE-205ENST00000521232 KIF1AQ12756 1690 aa24.7■■□□□ 1.54
SQLE-205ENST00000521232 XPCQ01831 940 aaPredicted RBP24.7■■□□□ 1.54
SQLE-205ENST00000521232 PHF8Q9UPP1 1060 aa24.7■■□□□ 1.54
SQLE-205ENST00000521232 ADGRB2O60241 1585 aa24.7■■□□□ 1.54
SQLE-205ENST00000521232 KIAA1210Q9ULL0 1709 aa24.69■■□□□ 1.54
SQLE-205ENST00000521232 COL22A1Q8NFW1 1626 aaPredicted RBP24.69■■□□□ 1.54
SQLE-205ENST00000521232 AFF2P51816 1311 aa24.68■■□□□ 1.54
SQLE-205ENST00000521232 ANKARQ7Z5J8 1434 aa24.68■■□□□ 1.54
SQLE-205ENST00000521232 MINK1Q8N4C8 1332 aaPredicted RBP24.67■■□□□ 1.54
SQLE-205ENST00000521232 KRT28Q7Z3Y7 464 aa24.67■■□□□ 1.54
SQLE-205ENST00000521232 C8orf37Q96NL8 207 aa24.67■■□□□ 1.54
SQLE-205ENST00000521232 SIN3AQ96ST3 1273 aa24.67■■□□□ 1.54
SQLE-205ENST00000521232 HIRIP3Q9BW71 556 aaPredicted RBP24.67■■□□□ 1.54
SQLE-205ENST00000521232 ADAMTS2O95450 1211 aa24.66■■□□□ 1.54
SQLE-205ENST00000521232 WASLO00401 505 aaPredicted RBP24.65■■□□□ 1.54
SQLE-205ENST00000521232 NBPF1Q3BBV0 1214 aa24.65■■□□□ 1.54
SQLE-205ENST00000521232 ARHGEF28Q8N1W1 1705 aaKnown RBP24.65■■□□□ 1.54
SQLE-205ENST00000521232 L3MBTL2Q969R5 705 aa24.65■■□□□ 1.54
SQLE-205ENST00000521232 USP32Q8NFA0 1604 aa24.64■■□□□ 1.54
SQLE-205ENST00000521232 SPATA31A3Q5VYP0 1347 aa24.64■■□□□ 1.54
SQLE-205ENST00000521232 PSME1Q06323 249 aa24.63■■□□□ 1.53
SQLE-205ENST00000521232 NGLY1Q96IV0 654 aa24.63■■□□□ 1.53
SQLE-205ENST00000521232 EIF3AQ14152 1382 aaKnown RBP24.63■■□□□ 1.53
SQLE-205ENST00000521232 RXRBP28702 533 aa24.62■■□□□ 1.53
SQLE-205ENST00000521232 TRIM26Q12899 539 aaPredicted RBP24.61■■□□□ 1.53
SQLE-205ENST00000521232 PMFBP1Q8TBY8 1022 aa24.61■■□□□ 1.53
SQLE-205ENST00000521232 NEUROD1Q13562 356 aa24.6■■□□□ 1.53
SQLE-205ENST00000521232 PRR36Q9H6K5 1346 aa24.6■■□□□ 1.53
SQLE-205ENST00000521232 FNBP4Q8N3X1 1017 aaPredicted RBP24.59■■□□□ 1.53
SQLE-205ENST00000521232 QTRT2Q9H974 415 aaKnown RBP24.59■■□□□ 1.53
SQLE-205ENST00000521232 TULP4Q9NRJ4 1543 aa24.59■■□□□ 1.53
SQLE-205ENST00000521232 SBNO1A3KN83 1393 aa24.57■■□□□ 1.52
SQLE-205ENST00000521232 TNS3Q68CZ2 1445 aa24.55■■□□□ 1.52
SQLE-205ENST00000521232 RBM6P78332 1123 aaKnown RBP24.54■■□□□ 1.52
SQLE-205ENST00000521232 NUDT16Q96DE0 195 aaKnown RBP24.54■■□□□ 1.52
SQLE-205ENST00000521232 CDK19Q9BWU1 502 aa24.54■■□□□ 1.52
SQLE-205ENST00000521232 USP21Q9UK80 565 aa24.54■■□□□ 1.52
SQLE-205ENST00000521232 CDK12Q9NYV4 1490 aaPredicted RBP24.53■■□□□ 1.52
SQLE-205ENST00000521232 MARF1Q9Y4F3 1742 aaKnown RBP24.53■■□□□ 1.52
SQLE-205ENST00000521232 ARHGEF10O15013 1369 aa24.51■■□□□ 1.51
SQLE-205ENST00000521232 TRPC5Q9UL62 973 aaPredicted RBP24.5■■□□□ 1.51
SQLE-205ENST00000521232 GPRASP1Q5JY77 1395 aa24.5■■□□□ 1.51
SQLE-205ENST00000521232 ATP7BP35670 1465 aa24.5■■□□□ 1.51
SQLE-205ENST00000521232 NGDNQ8NEJ9 315 aaKnown RBP24.49■■□□□ 1.51
SQLE-205ENST00000521232 CENPJQ9HC77 1338 aaPredicted RBP24.49■■□□□ 1.51
SQLE-205ENST00000521232 LMOD2Q6P5Q4 547 aa24.48■■□□□ 1.51
SQLE-205ENST00000521232 TRPM3Q9HCF6 1732 aaPredicted RBP24.48■■□□□ 1.51
SQLE-205ENST00000521232 ITSN1Q15811 1721 aa24.47■■□□□ 1.51
SQLE-205ENST00000521232 TRPM1Q7Z4N2 1603 aa24.47■■□□□ 1.51
SQLE-205ENST00000521232 BCL9LQ86UU0 1499 aa24.47■■□□□ 1.51
SQLE-205ENST00000521232 CABLES1Q8TDN4 633 aa24.47■■□□□ 1.51
SQLE-205ENST00000521232 CCDC61Q9Y6R9 512 aa24.47■■□□□ 1.51
SQLE-205ENST00000521232 ATRNO75882 1429 aa24.45■■□□□ 1.51
SQLE-205ENST00000521232 PLEKHG3A1L390 1219 aa24.44■■□□□ 1.5
SQLE-205ENST00000521232 HAP1P54257 671 aaPredicted RBP24.44■■□□□ 1.5
SQLE-205ENST00000521232 ALS2Q96Q42 1657 aa24.43■■□□□ 1.5
SQLE-205ENST00000521232 NBPF8Q3BBV2 869 aa24.43■■□□□ 1.5
SQLE-205ENST00000521232 ROCK2O75116 1388 aaKnown RBP24.42■■□□□ 1.5
SQLE-205ENST00000521232 SLIT2O94813 1529 aa24.42■■□□□ 1.5
SQLE-205ENST00000521232 RGS12O14924 1447 aa24.42■■□□□ 1.5
SQLE-205ENST00000521232 POLR3AO14802 1390 aaPredicted RBP24.42■■□□□ 1.5
SQLE-205ENST00000521232 UNC5CLQ8IV45 518 aa24.41■■□□□ 1.5
SQLE-205ENST00000521232 TOPAZ1Q8N9V7 1692 aa24.4■■□□□ 1.5
SQLE-205ENST00000521232 ACEP12821 1306 aa24.4■■□□□ 1.5
SQLE-205ENST00000521232 PAK3O75914 559 aaPredicted RBP24.4■■□□□ 1.5
SQLE-205ENST00000521232 PLEKHG5O94827 1062 aa24.4■■□□□ 1.5
SQLE-205ENST00000521232 ABCA3Q99758 1704 aa24.4■■□□□ 1.5
SQLE-205ENST00000521232 QRICH2Q9H0J4 1663 aa24.4■■□□□ 1.5
SQLE-205ENST00000521232 SRPK2P78362 688 aaKnown RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 570.7 ms