RNA–Protein interactions for RNA: ENST00000521163.5

HDAC2-210, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-210ENST00000521163 NBPF1Q3BBV0 1214 aa14.18□□□□□ -0.14
HDAC2-210ENST00000521163 NBPF8Q3BBV2 869 aa14.18□□□□□ -0.14
HDAC2-210ENST00000521163 FMN2Q9NZ56 1722 aa14.18□□□□□ -0.14
HDAC2-210ENST00000521163 CADPS2Q86UW7 1296 aa14.17□□□□□ -0.14
HDAC2-210ENST00000521163 ROBO1Q9Y6N7 1651 aa14.17□□□□□ -0.14
HDAC2-210ENST00000521163 MST1RQ04912 1400 aa14.16□□□□□ -0.14
HDAC2-210ENST00000521163 PIP4K2BP78356 416 aa14.16□□□□□ -0.14
HDAC2-210ENST00000521163 WAPLQ7Z5K2 1190 aa14.16□□□□□ -0.14
HDAC2-210ENST00000521163 QRICH2Q9H0J4 1663 aa14.16□□□□□ -0.14
HDAC2-210ENST00000521163 ATF3P18847 181 aa14.15□□□□□ -0.14
HDAC2-210ENST00000521163 HSPA1LP34931 641 aa14.15□□□□□ -0.14
HDAC2-210ENST00000521163 PRAM1Q96QH2 718 aa14.15□□□□□ -0.14
HDAC2-210ENST00000521163 TRAK1Q9UPV9 953 aa14.15□□□□□ -0.14
HDAC2-210ENST00000521163 EIF3AQ14152 1382 aaKnown RBP14.13□□□□□ -0.15
HDAC2-210ENST00000521163 POGKQ9P215 609 aa14.13□□□□□ -0.15
HDAC2-210ENST00000521163 SLAIN2Q9P270 581 aa14.12□□□□□ -0.15
HDAC2-210ENST00000521163 C1orf167Q5SNV9 1468 aa14.12□□□□□ -0.15
HDAC2-210ENST00000521163 NHSL1Q5SYE7 1610 aa14.11□□□□□ -0.15
HDAC2-210ENST00000521163 AHDC1Q5TGY3 1603 aaPredicted RBP14.11□□□□□ -0.15
HDAC2-210ENST00000521163 SCAF1Q9H7N4 1312 aaKnown RBP14.11□□□□□ -0.15
HDAC2-210ENST00000521163 USP32Q8NFA0 1604 aa14.1□□□□□ -0.15
HDAC2-210ENST00000521163 CENPJQ9HC77 1338 aaPredicted RBP14.1□□□□□ -0.15
HDAC2-210ENST00000521163 TULP4Q9NRJ4 1543 aa14.1□□□□□ -0.15
HDAC2-210ENST00000521163 ANKARQ7Z5J8 1434 aa14.09□□□□□ -0.15
HDAC2-210ENST00000521163 SAFB2Q14151 953 aaKnown RBP eCLIP14.09□□□□□ -0.15
HDAC2-210ENST00000521163 CARD11Q9BXL7 1154 aa14.09□□□□□ -0.15
HDAC2-210ENST00000521163 KIF1AQ12756 1690 aa14.09□□□□□ -0.15
HDAC2-210ENST00000521163 ITSN1Q15811 1721 aa14.09□□□□□ -0.15
HDAC2-210ENST00000521163 RGPD8O14715 1765 aaPredicted RBP14.09□□□□□ -0.15
HDAC2-210ENST00000521163 MINK1Q8N4C8 1332 aaPredicted RBP14.08□□□□□ -0.16
HDAC2-210ENST00000521163 SBNO2Q9Y2G9 1366 aa14.08□□□□□ -0.16
HDAC2-210ENST00000521163 TOPAZ1Q8N9V7 1692 aa14.07□□□□□ -0.16
HDAC2-210ENST00000521163 PHLPP1O60346 1717 aa14.07□□□□□ -0.16
HDAC2-210ENST00000521163 COL16A1Q07092 1604 aaPredicted RBP14.07□□□□□ -0.16
HDAC2-210ENST00000521163 BRINP3Q76B58 766 aa14.06□□□□□ -0.16
HDAC2-210ENST00000521163 DISP3Q9P2K9 1392 aa14.06□□□□□ -0.16
HDAC2-210ENST00000521163 ATP7BP35670 1465 aa14.06□□□□□ -0.16
HDAC2-210ENST00000521163 ILDR2Q71H61 639 aa14.05□□□□□ -0.16
HDAC2-210ENST00000521163 WASLO00401 505 aaPredicted RBP14.04□□□□□ -0.16
HDAC2-210ENST00000521163 HIRIP3Q9BW71 556 aaPredicted RBP14.04□□□□□ -0.16
HDAC2-210ENST00000521163 USP47Q96K76 1375 aa14.04□□□□□ -0.16
HDAC2-210ENST00000521163 PRR36Q9H6K5 1346 aa14.01□□□□□ -0.17
HDAC2-210ENST00000521163 ORAI2Q96SN7 254 aa14.01□□□□□ -0.17
HDAC2-210ENST00000521163 NUTM2FA1L443 756 aa14□□□□□ -0.17
HDAC2-210ENST00000521163 SHPRHQ149N8 1683 aa14□□□□□ -0.17
HDAC2-210ENST00000521163 PXDNQ92626 1479 aa13.99□□□□□ -0.17
HDAC2-210ENST00000521163 EVC2Q86UK5 1308 aa13.99□□□□□ -0.17
HDAC2-210ENST00000521163 ESCO1Q5FWF5 840 aa13.99□□□□□ -0.17
HDAC2-210ENST00000521163 CDK19Q9BWU1 502 aa13.99□□□□□ -0.17
HDAC2-210ENST00000521163 NPHP3Q7Z494 1330 aa13.98□□□□□ -0.17
HDAC2-210ENST00000521163 SOS2Q07890 1332 aaPredicted RBP13.97□□□□□ -0.17
HDAC2-210ENST00000521163 TESK2Q96S53 571 aa13.97□□□□□ -0.17
HDAC2-210ENST00000521163 PHF8Q9UPP1 1060 aa13.97□□□□□ -0.17
HDAC2-210ENST00000521163 MED1Q15648 1581 aaPredicted RBP13.96□□□□□ -0.17
HDAC2-210ENST00000521163 TRPM3Q9HCF6 1732 aaPredicted RBP13.96□□□□□ -0.17
HDAC2-210ENST00000521163 ST20-MTHFSA0A0A6YYL1 179 aa13.96□□□□□ -0.17
HDAC2-210ENST00000521163 NUDT16Q96DE0 195 aaKnown RBP13.96□□□□□ -0.17
HDAC2-210ENST00000521163 ATAD2Q6PL18 1390 aa13.96□□□□□ -0.18
HDAC2-210ENST00000521163 JCADQ9P266 1359 aa13.96□□□□□ -0.18
HDAC2-210ENST00000521163 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
HDAC2-210ENST00000521163 SRPK2P78362 688 aaKnown RBP13.95□□□□□ -0.18
HDAC2-210ENST00000521163 COL22A1Q8NFW1 1626 aaPredicted RBP13.94□□□□□ -0.18
HDAC2-210ENST00000521163 PPIP5K1Q6PFW1 1433 aa13.94□□□□□ -0.18
HDAC2-210ENST00000521163 DDX17Q92841 729 aaKnown RBP13.94□□□□□ -0.18
HDAC2-210ENST00000521163 CABP2Q9NPB3 220 aa13.94□□□□□ -0.18
HDAC2-210ENST00000521163 CCDC61Q9Y6R9 512 aa13.94□□□□□ -0.18
HDAC2-210ENST00000521163 POLR3AO14802 1390 aaPredicted RBP13.94□□□□□ -0.18
HDAC2-210ENST00000521163 AKAP12Q02952 1782 aa13.94□□□□□ -0.18
HDAC2-210ENST00000521163 FOXO3O43524 673 aa13.93□□□□□ -0.18
HDAC2-210ENST00000521163 ALS2Q96Q42 1657 aa13.92□□□□□ -0.18
HDAC2-210ENST00000521163 PUS7Q96PZ0 661 aaKnown RBP13.92□□□□□ -0.18
HDAC2-210ENST00000521163 TNS3Q68CZ2 1445 aa13.91□□□□□ -0.18
HDAC2-210ENST00000521163 MON2Q7Z3U7 1717 aa13.91□□□□□ -0.18
HDAC2-210ENST00000521163 PLEKHG3A1L390 1219 aa13.91□□□□□ -0.18
HDAC2-210ENST00000521163 EIF4G2P78344 907 aaKnown RBP eCLIP13.91□□□□□ -0.18
HDAC2-210ENST00000521163 PMFBP1Q8TBY8 1022 aa13.91□□□□□ -0.18
HDAC2-210ENST00000521163 LRRC59Q96AG4 307 aaKnown RBP13.91□□□□□ -0.18
HDAC2-210ENST00000521163 SBNO1A3KN83 1393 aa13.91□□□□□ -0.18
HDAC2-210ENST00000521163 PNPLA6Q8IY17 1366 aa13.91□□□□□ -0.18
HDAC2-210ENST00000521163 RGS17Q9UGC6 210 aaPredicted RBP13.9□□□□□ -0.18
HDAC2-210ENST00000521163 NINLQ9Y2I6 1382 aa13.9□□□□□ -0.18
HDAC2-210ENST00000521163 NRKQ7Z2Y5 1582 aa13.9□□□□□ -0.18
HDAC2-210ENST00000521163 MYOM1P52179 1685 aa13.9□□□□□ -0.18
HDAC2-210ENST00000521163 ABCA3Q99758 1704 aa13.9□□□□□ -0.18
HDAC2-210ENST00000521163 TMF1P82094 1093 aa13.89□□□□□ -0.19
HDAC2-210ENST00000521163 XPCQ01831 940 aaPredicted RBP13.89□□□□□ -0.19
HDAC2-210ENST00000521163 NGDNQ8NEJ9 315 aaKnown RBP13.89□□□□□ -0.19
HDAC2-210ENST00000521163 SPATA31A6Q5VVP1 1343 aa13.89□□□□□ -0.19
HDAC2-210ENST00000521163 HSPA5P11021 654 aaKnown RBP13.88□□□□□ -0.19
HDAC2-210ENST00000521163 KRT28Q7Z3Y7 464 aa13.88□□□□□ -0.19
HDAC2-210ENST00000521163 USP6P35125 1406 aa13.88□□□□□ -0.19
HDAC2-210ENST00000521163 ACEP12821 1306 aa13.88□□□□□ -0.19
HDAC2-210ENST00000521163 SPATA31A3Q5VYP0 1347 aa13.88□□□□□ -0.19
HDAC2-210ENST00000521163 CRYBG1Q9Y4K1 1723 aa13.87□□□□□ -0.19
HDAC2-210ENST00000521163 ARHGEF10O15013 1369 aa13.87□□□□□ -0.19
HDAC2-210ENST00000521163 BRD4O60885 1362 aaPredicted RBP13.87□□□□□ -0.19
HDAC2-210ENST00000521163 LRP6O75581 1613 aa13.87□□□□□ -0.19
HDAC2-210ENST00000521163 PSME1Q06323 249 aa13.87□□□□□ -0.19
HDAC2-210ENST00000521163 CPSF1Q10570 1443 aaKnown RBP13.87□□□□□ -0.19
HDAC2-210ENST00000521163 CD163L1Q9NR16 1453 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms