RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 ATG7O95352 703 aa5.78□□□□□ -1.48
SREK1-208ENST00000520580 DNAJB2P25686 324 aa5.78□□□□□ -1.48
SREK1-208ENST00000520580 GJA5P36382 358 aa5.78□□□□□ -1.48
SREK1-208ENST00000520580 SEMA3FQ13275 785 aa5.78□□□□□ -1.48
SREK1-208ENST00000520580 HELBQ8NG08 1087 aaPredicted RBP5.78□□□□□ -1.48
SREK1-208ENST00000520580 TMEM134Q9H6X4 195 aa5.78□□□□□ -1.48
SREK1-208ENST00000520580 CFAP99D6REC4 459 aa5.77□□□□□ -1.49
SREK1-208ENST00000520580 NR6A1Q15406 480 aa5.77□□□□□ -1.49
SREK1-208ENST00000520580 STK32AQ8WU08 396 aa5.77□□□□□ -1.49
SREK1-208ENST00000520580 MTMR2Q13614 643 aa5.77□□□□□ -1.49
SREK1-208ENST00000520580 TMEM164Q5U3C3 297 aa5.76□□□□□ -1.49
SREK1-208ENST00000520580 C6orf229H3BNL8 230 aa5.75□□□□□ -1.49
SREK1-208ENST00000520580 SYMPKQ92797 1274 aaKnown RBP5.75□□□□□ -1.49
SREK1-208ENST00000520580 TATDN2Q93075 761 aa5.75□□□□□ -1.49
SREK1-208ENST00000520580 ZMIZ1Q9ULJ6 1067 aa5.75□□□□□ -1.49
SREK1-208ENST00000520580 ARSIQ5FYB1 569 aa5.75□□□□□ -1.49
SREK1-208ENST00000520580 PIK3CDO00329 1044 aa5.74□□□□□ -1.49
SREK1-208ENST00000520580 NBPF26B4DH59 902 aa5.74□□□□□ -1.49
SREK1-208ENST00000520580 PER1O15534 1290 aaPredicted RBP5.74□□□□□ -1.49
SREK1-208ENST00000520580 GCGRP47871 477 aa5.74□□□□□ -1.49
SREK1-208ENST00000520580 MRRFQ96E11 262 aaKnown RBP5.74□□□□□ -1.49
SREK1-208ENST00000520580 GNEQ9Y223 722 aaKnown RBP5.74□□□□□ -1.49
SREK1-208ENST00000520580 ATP9BO43861 1147 aa5.73□□□□□ -1.49
SREK1-208ENST00000520580 PHLDB3Q6NSJ2 640 aa5.73□□□□□ -1.49
SREK1-208ENST00000520580 DEPDC4Q8N2C3 294 aa5.73□□□□□ -1.49
SREK1-208ENST00000520580 SCNN1AP37088 669 aa5.73□□□□□ -1.49
SREK1-208ENST00000520580 KANK4Q5T7N3 995 aaPredicted RBP5.73□□□□□ -1.49
SREK1-208ENST00000520580 CCER1Q8TC90 406 aaPredicted RBP5.73□□□□□ -1.49
SREK1-208ENST00000520580 KIAA1522Q9P206 1035 aaPredicted RBP5.73□□□□□ -1.49
SREK1-208ENST00000520580 PROX2Q3B8N5 592 aa5.72□□□□□ -1.49
SREK1-208ENST00000520580 NOVA2Q9UNW9 492 aaKnown RBP5.72□□□□□ -1.49
SREK1-208ENST00000520580 RBM47A0AV96 593 aaKnown RBP5.72□□□□□ -1.49
SREK1-208ENST00000520580 SLC10A3P09131 477 aa5.72□□□□□ -1.49
SREK1-208ENST00000520580 USP46P62068 366 aa5.72□□□□□ -1.49
SREK1-208ENST00000520580 SOX11P35716 441 aa5.71□□□□□ -1.5
SREK1-208ENST00000520580 SERPINB4P48594 390 aa5.71□□□□□ -1.5
SREK1-208ENST00000520580 TXNDC2Q86VQ3 553 aa5.71□□□□□ -1.5
SREK1-208ENST00000520580 DCBLD2Q96PD2 775 aa5.71□□□□□ -1.5
SREK1-208ENST00000520580 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.71□□□□□ -1.5
SREK1-208ENST00000520580 TRIM6-TRIM34B2RNG4 842 aa5.71□□□□□ -1.5
SREK1-208ENST00000520580 EIF4G2P78344 907 aaKnown RBP eCLIP5.71□□□□□ -1.5
SREK1-208ENST00000520580 FUT2Q10981 343 aa5.71□□□□□ -1.5
SREK1-208ENST00000520580 B4GALNT3Q6L9W6 998 aa5.71□□□□□ -1.5
SREK1-208ENST00000520580 PACS2Q86VP3 889 aa5.71□□□□□ -1.5
SREK1-208ENST00000520580 METRNQ9UJH8 293 aa5.71□□□□□ -1.5
SREK1-208ENST00000520580 CLCN6P51797 869 aa5.7□□□□□ -1.5
SREK1-208ENST00000520580 DNAJC14Q6Y2X3 702 aaPredicted RBP5.7□□□□□ -1.5
SREK1-208ENST00000520580 SLF2Q8IX21 1173 aa5.7□□□□□ -1.5
SREK1-208ENST00000520580 LHX6Q9UPM6 363 aa5.7□□□□□ -1.5
SREK1-208ENST00000520580 USP17L3A6NCW0 530 aa5.7□□□□□ -1.5
SREK1-208ENST00000520580 USP17L4A6NCW7 530 aa5.7□□□□□ -1.5
SREK1-208ENST00000520580 PPP1R3GB7ZBB8 358 aa5.7□□□□□ -1.5
SREK1-208ENST00000520580 CRTC2Q53ET0 693 aaPredicted RBP5.7□□□□□ -1.5
SREK1-208ENST00000520580 NOM1Q5C9Z4 860 aaKnown RBP5.7□□□□□ -1.5
SREK1-208ENST00000520580 USP17L2Q6R6M4 530 aa5.7□□□□□ -1.5
SREK1-208ENST00000520580 USP17L1Q7RTZ2 530 aa5.7□□□□□ -1.5
SREK1-208ENST00000520580 SLAIN2Q9P270 581 aa5.7□□□□□ -1.5
SREK1-208ENST00000520580 FBXO45P0C2W1 286 aa5.69□□□□□ -1.5
SREK1-208ENST00000520580 PTPREP23469 700 aa5.69□□□□□ -1.5
SREK1-208ENST00000520580 SLC39A7Q92504 469 aa5.69□□□□□ -1.5
SREK1-208ENST00000520580 BCL2L13Q9BXK5 485 aa5.69□□□□□ -1.5
SREK1-208ENST00000520580 IGSF5Q9NSI5 407 aa5.69□□□□□ -1.5
SREK1-208ENST00000520580 SKIP12755 728 aa5.69□□□□□ -1.5
SREK1-208ENST00000520580 ZNF16P17020 682 aaPredicted RBP5.69□□□□□ -1.5
SREK1-208ENST00000520580 SWT1Q5T5J6 900 aaKnown RBP5.69□□□□□ -1.5
SREK1-208ENST00000520580 PNMA1Q8ND90 353 aa5.69□□□□□ -1.5
SREK1-208ENST00000520580 GIPC2Q8TF65 315 aa5.69□□□□□ -1.5
SREK1-208ENST00000520580 BCL2L12Q9HB09 334 aa5.69□□□□□ -1.5
SREK1-208ENST00000520580 BIN2Q9UBW5 565 aaPredicted RBP5.69□□□□□ -1.5
SREK1-208ENST00000520580 PPP4R3BQ5MIZ7 849 aa5.68□□□□□ -1.5
SREK1-208ENST00000520580 RSPH4AQ5TD94 716 aa5.68□□□□□ -1.5
SREK1-208ENST00000520580 SSFA2P28290 1259 aa5.67□□□□□ -1.5
SREK1-208ENST00000520580 USP17L5A8MUK1 530 aa5.67□□□□□ -1.5
SREK1-208ENST00000520580 ELOAQ14241 798 aaKnown RBP5.67□□□□□ -1.5
SREK1-208ENST00000520580 USP17L15C9J2P7 530 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 USP17L10C9JJH3 530 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 USP17L13C9JLJ4 530 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 USP17L12C9JPN9 530 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 USP17L11C9JVI0 530 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 USP17L21D6R901 530 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 USP17L18D6R9N7 530 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 USP17L22D6RA61 530 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 USP17L17D6RBQ6 530 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 USP17L19D6RCP7 530 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 USP17L20D6RJB6 530 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 C7P10643 843 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 ARID4AP29374 1257 aaPredicted RBP5.66□□□□□ -1.5
SREK1-208ENST00000520580 USP17L24Q0WX57 530 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 FAM174AQ8TBP5 190 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 MKRN1Q9UHC7 482 aaKnown RBP5.66□□□□□ -1.5
SREK1-208ENST00000520580 SOWAHDA6NJG2 315 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 RNF40O75150 1001 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 HSP90B1P14625 803 aaKnown RBP5.66□□□□□ -1.5
SREK1-208ENST00000520580 RASA1P20936 1047 aa5.66□□□□□ -1.5
SREK1-208ENST00000520580 MARSP56192 900 aaKnown RBP5.66□□□□□ -1.5
SREK1-208ENST00000520580 SEPT9Q9UHD8 586 aaPredicted RBP5.66□□□□□ -1.5
SREK1-208ENST00000520580 GABBR2O75899 941 aa5.65□□□□□ -1.5
SREK1-208ENST00000520580 CDK11BP21127 795 aaKnown RBP5.65□□□□□ -1.5
SREK1-208ENST00000520580 NCOA4Q13772 614 aa5.65□□□□□ -1.5
SREK1-208ENST00000520580 GPR153Q6NV75 609 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms