RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 AHDC1Q5TGY3 1603 aaPredicted RBP7.91□□□□□ -1.14
SDCBP-207ENST00000520168 TET3O43151 1660 aa7.91□□□□□ -1.14
SDCBP-207ENST00000520168 TMEM2Q9UHN6 1383 aa7.9□□□□□ -1.14
SDCBP-207ENST00000520168 KCNA6P17658 529 aa7.9□□□□□ -1.14
SDCBP-207ENST00000520168 LTKP29376 864 aa7.9□□□□□ -1.14
SDCBP-207ENST00000520168 EP400Q96L91 3159 aa7.9□□□□□ -1.14
SDCBP-207ENST00000520168 DUOX2Q9NRD8 1548 aa7.89□□□□□ -1.15
SDCBP-207ENST00000520168 NCOA3Q9Y6Q9 1424 aa7.89□□□□□ -1.15
SDCBP-207ENST00000520168 LRP6O75581 1613 aa7.89□□□□□ -1.15
SDCBP-207ENST00000520168 MEX3CQ5U5Q3 659 aaKnown RBP7.88□□□□□ -1.15
SDCBP-207ENST00000520168 PROSER2Q86WR7 435 aaPredicted RBP7.88□□□□□ -1.15
SDCBP-207ENST00000520168 TMEM106CQ9BVX2 250 aa7.88□□□□□ -1.15
SDCBP-207ENST00000520168 SLAIN2Q9P270 581 aa7.88□□□□□ -1.15
SDCBP-207ENST00000520168 ADGRB3O60242 1522 aa7.88□□□□□ -1.15
SDCBP-207ENST00000520168 CROCC2H7BZ55 1655 aa7.87□□□□□ -1.15
SDCBP-207ENST00000520168 RXRBP28702 533 aa7.87□□□□□ -1.15
SDCBP-207ENST00000520168 FBXO3Q9UK99 471 aa7.87□□□□□ -1.15
SDCBP-207ENST00000520168 ERBINQ96RT1 1412 aa7.86□□□□□ -1.15
SDCBP-207ENST00000520168 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.86□□□□□ -1.15
SDCBP-207ENST00000520168 TRIM52Q96A61 297 aa7.86□□□□□ -1.15
SDCBP-207ENST00000520168 DIP2AQ14689 1571 aa7.85□□□□□ -1.15
SDCBP-207ENST00000520168 LMTK2Q8IWU2 1503 aa7.85□□□□□ -1.15
SDCBP-207ENST00000520168 DCAF8Q5TAQ9 597 aa7.85□□□□□ -1.15
SDCBP-207ENST00000520168 NHSL1Q5SYE7 1610 aa7.85□□□□□ -1.15
SDCBP-207ENST00000520168 MYO5BQ9ULV0 1848 aa7.85□□□□□ -1.15
SDCBP-207ENST00000520168 PLCG2P16885 1265 aa7.84□□□□□ -1.15
SDCBP-207ENST00000520168 KANK1Q14678 1352 aa7.84□□□□□ -1.16
SDCBP-207ENST00000520168 GCC2Q8IWJ2 1684 aa7.83□□□□□ -1.16
SDCBP-207ENST00000520168 IRX5P78411 483 aaPredicted RBP7.82□□□□□ -1.16
SDCBP-207ENST00000520168 CADPS2Q86UW7 1296 aa7.82□□□□□ -1.16
SDCBP-207ENST00000520168 ATAD2Q6PL18 1390 aa7.82□□□□□ -1.16
SDCBP-207ENST00000520168 RGS12O14924 1447 aa7.81□□□□□ -1.16
SDCBP-207ENST00000520168 DCCP43146 1447 aa7.81□□□□□ -1.16
SDCBP-207ENST00000520168 MYOM3Q5VTT5 1437 aa7.81□□□□□ -1.16
SDCBP-207ENST00000520168 PYGBP11216 843 aa7.81□□□□□ -1.16
SDCBP-207ENST00000520168 HDGFP51858 240 aaKnown RBP7.81□□□□□ -1.16
SDCBP-207ENST00000520168 SLAIN1Q8ND83 568 aa7.81□□□□□ -1.16
SDCBP-207ENST00000520168 SLC26A8Q96RN1 970 aa7.81□□□□□ -1.16
SDCBP-207ENST00000520168 PIK3R4Q99570 1358 aa7.81□□□□□ -1.16
SDCBP-207ENST00000520168 PLEKHG1Q9ULL1 1385 aa7.81□□□□□ -1.16
SDCBP-207ENST00000520168 RPRD2Q5VT52 1461 aaKnown RBP7.81□□□□□ -1.16
SDCBP-207ENST00000520168 AFF2P51816 1311 aa7.8□□□□□ -1.16
SDCBP-207ENST00000520168 NOS1P29475 1434 aa7.8□□□□□ -1.16
SDCBP-207ENST00000520168 SETD5Q9C0A6 1442 aa7.8□□□□□ -1.16
SDCBP-207ENST00000520168 RBM6P78332 1123 aaKnown RBP7.8□□□□□ -1.16
SDCBP-207ENST00000520168 OCEL1Q9H607 264 aa7.8□□□□□ -1.16
SDCBP-207ENST00000520168 SLC52A1Q9NWF4 448 aa7.8□□□□□ -1.16
SDCBP-207ENST00000520168 KIF15Q9NS87 1388 aa7.8□□□□□ -1.16
SDCBP-207ENST00000520168 ZFYVE9O95405 1425 aa7.79□□□□□ -1.16
SDCBP-207ENST00000520168 ASXL1Q8IXJ9 1541 aa7.79□□□□□ -1.16
SDCBP-207ENST00000520168 TMEM131LA2VDJ0 1609 aa7.79□□□□□ -1.16
SDCBP-207ENST00000520168 LRP5O75197 1615 aa7.79□□□□□ -1.16
SDCBP-207ENST00000520168 ATF3P18847 181 aa7.79□□□□□ -1.16
SDCBP-207ENST00000520168 IDI1Q13907 227 aa7.79□□□□□ -1.16
SDCBP-207ENST00000520168 RBM33Q96EV2 1170 aaKnown RBP7.79□□□□□ -1.16
SDCBP-207ENST00000520168 NGLY1Q96IV0 654 aa7.79□□□□□ -1.16
SDCBP-207ENST00000520168 C19orf44Q9H6X5 657 aa7.79□□□□□ -1.16
SDCBP-207ENST00000520168 TRPM2O94759 1503 aa7.78□□□□□ -1.16
SDCBP-207ENST00000520168 C14orf37Q86TY3 774 aa7.78□□□□□ -1.16
SDCBP-207ENST00000520168 CCDC125Q86Z20 511 aa7.78□□□□□ -1.16
SDCBP-207ENST00000520168 BCANQ96GW7 911 aa7.78□□□□□ -1.16
SDCBP-207ENST00000520168 MARF1Q9Y4F3 1742 aaKnown RBP7.78□□□□□ -1.16
SDCBP-207ENST00000520168 LAMC1P11047 1609 aa7.78□□□□□ -1.16
SDCBP-207ENST00000520168 PTPN23Q9H3S7 1636 aa7.78□□□□□ -1.16
SDCBP-207ENST00000520168 NUTM2BA6NNL0 878 aaPredicted RBP7.77□□□□□ -1.17
SDCBP-207ENST00000520168 NUTM2EB1AL46 878 aaPredicted RBP7.77□□□□□ -1.17
SDCBP-207ENST00000520168 GSE1Q14687 1217 aa7.77□□□□□ -1.17
SDCBP-207ENST00000520168 NUTM2DQ5VT03 806 aaPredicted RBP7.77□□□□□ -1.17
SDCBP-207ENST00000520168 NUTM2AQ8IVF1 878 aaPredicted RBP7.77□□□□□ -1.17
SDCBP-207ENST00000520168 TBX22Q9Y458 520 aa7.77□□□□□ -1.17
SDCBP-207ENST00000520168 XRN1Q8IZH2 1706 aaKnown RBP7.76□□□□□ -1.17
SDCBP-207ENST00000520168 PPP1R15AO75807 674 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-207ENST00000520168 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.76□□□□□ -1.17
SDCBP-207ENST00000520168 LRRC59Q96AG4 307 aaKnown RBP7.76□□□□□ -1.17
SDCBP-207ENST00000520168 QTRT2Q9H974 415 aaKnown RBP7.76□□□□□ -1.17
SDCBP-207ENST00000520168 PCDHB8Q9UN66 801 aa7.76□□□□□ -1.17
SDCBP-207ENST00000520168 RIMS2Q9UQ26 1411 aa7.76□□□□□ -1.17
SDCBP-207ENST00000520168 SETBP1Q9Y6X0 1596 aa7.76□□□□□ -1.17
SDCBP-207ENST00000520168 SPHKAPQ2M3C7 1700 aa7.75□□□□□ -1.17
SDCBP-207ENST00000520168 ST18O60284 1047 aa7.75□□□□□ -1.17
SDCBP-207ENST00000520168 BRINP3Q76B58 766 aa7.75□□□□□ -1.17
SDCBP-207ENST00000520168 CDAN1Q8IWY9 1227 aa7.75□□□□□ -1.17
SDCBP-207ENST00000520168 KLHL34Q8N239 644 aa7.75□□□□□ -1.17
SDCBP-207ENST00000520168 IQGAP3Q86VI3 1631 aa7.74□□□□□ -1.17
SDCBP-207ENST00000520168 COL22A1Q8NFW1 1626 aaPredicted RBP7.74□□□□□ -1.17
SDCBP-207ENST00000520168 VASPP50552 380 aaPredicted RBP7.74□□□□□ -1.17
SDCBP-207ENST00000520168 ZNF467Q7Z7K2 595 aaPredicted RBP7.74□□□□□ -1.17
SDCBP-207ENST00000520168 C8orf37Q96NL8 207 aa7.74□□□□□ -1.17
SDCBP-207ENST00000520168 UNC13BO14795 1591 aa7.74□□□□□ -1.17
SDCBP-207ENST00000520168 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.74□□□□□ -1.17
SDCBP-207ENST00000520168 PNPLA6Q8IY17 1366 aa7.73□□□□□ -1.17
SDCBP-207ENST00000520168 MST1RQ04912 1400 aa7.73□□□□□ -1.17
SDCBP-207ENST00000520168 PTCH1Q13635 1447 aa7.73□□□□□ -1.17
SDCBP-207ENST00000520168 ADAMTS13Q76LX8 1427 aa7.73□□□□□ -1.17
SDCBP-207ENST00000520168 ANKRD30AQ9BXX3 1397 aa7.72□□□□□ -1.17
SDCBP-207ENST00000520168 NALCNQ8IZF0 1738 aa7.72□□□□□ -1.17
SDCBP-207ENST00000520168 ABCC5O15440 1437 aa7.72□□□□□ -1.17
SDCBP-207ENST00000520168 DAPK1P53355 1430 aa7.72□□□□□ -1.17
SDCBP-207ENST00000520168 SNPHO15079 494 aa7.72□□□□□ -1.17
SDCBP-207ENST00000520168 CHRM1P11229 460 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms