RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 RAD54L2Q9Y4B4 1467 aa16.84■□□□□ 0.29
PABPC1-208ENST00000519004 FOXD4L1Q9NU39 408 aa16.84■□□□□ 0.29
PABPC1-208ENST00000519004 KDM5DQ9BY66 1539 aa16.84■□□□□ 0.29
PABPC1-208ENST00000519004 ADGBQ8N7X0 1667 aa16.84■□□□□ 0.29
PABPC1-208ENST00000519004 ZBTB22O15209 634 aa16.84■□□□□ 0.29
PABPC1-208ENST00000519004 PRIM1P49642 420 aaKnown RBP16.84■□□□□ 0.29
PABPC1-208ENST00000519004 CAVIN1Q6NZI2 390 aaKnown RBP16.84■□□□□ 0.29
PABPC1-208ENST00000519004 AEBP2Q6ZN18 517 aaPredicted RBP16.83■□□□□ 0.28
PABPC1-208ENST00000519004 PRAG1Q86YV5 1406 aa16.83■□□□□ 0.28
PABPC1-208ENST00000519004 CD2BP2O95400 341 aaKnown RBP16.82■□□□□ 0.28
PABPC1-208ENST00000519004 PLCD3Q8N3E9 789 aa16.82■□□□□ 0.28
PABPC1-208ENST00000519004 PRIMPOLQ96LW4 560 aa16.82■□□□□ 0.28
PABPC1-208ENST00000519004 ERBINQ96RT1 1412 aa16.82■□□□□ 0.28
PABPC1-208ENST00000519004 GPRASP1Q5JY77 1395 aa16.82■□□□□ 0.28
PABPC1-208ENST00000519004 CGNQ9P2M7 1197 aaKnown RBP16.81■□□□□ 0.28
PABPC1-208ENST00000519004 RSPH4AQ5TD94 716 aa16.81■□□□□ 0.28
PABPC1-208ENST00000519004 KIF2CQ99661 725 aa16.81■□□□□ 0.28
PABPC1-208ENST00000519004 PIK3C2GO75747 1445 aa16.81■□□□□ 0.28
PABPC1-208ENST00000519004 MAGI2Q86UL8 1455 aa16.81■□□□□ 0.28
PABPC1-208ENST00000519004 HMGN5P82970 282 aaKnown RBP16.8■□□□□ 0.28
PABPC1-208ENST00000519004 KIAA2012Q0VF49 1180 aa16.8■□□□□ 0.28
PABPC1-208ENST00000519004 NBPF1Q3BBV0 1214 aa16.8■□□□□ 0.28
PABPC1-208ENST00000519004 PAXIP1Q6ZW49 1069 aaPredicted RBP16.8■□□□□ 0.28
PABPC1-208ENST00000519004 PRDM15P57071 1507 aaPredicted RBP16.8■□□□□ 0.28
PABPC1-208ENST00000519004 ADGRL2O95490 1459 aa16.79■□□□□ 0.28
PABPC1-208ENST00000519004 SPDYE4A6NLX3 237 aa16.79■□□□□ 0.28
PABPC1-208ENST00000519004 K7ELQ4 463 aaPredicted RBP16.79■□□□□ 0.28
PABPC1-208ENST00000519004 RARSP54136 660 aaKnown RBP16.79■□□□□ 0.28
PABPC1-208ENST00000519004 LMBRD1Q9NUN5 540 aa16.79■□□□□ 0.28
PABPC1-208ENST00000519004 LAMC1P11047 1609 aa16.79■□□□□ 0.28
PABPC1-208ENST00000519004 GAS2L2Q8NHY3 880 aa16.78■□□□□ 0.28
PABPC1-208ENST00000519004 EIF4G3O43432 1585 aaKnown RBP16.78■□□□□ 0.28
PABPC1-208ENST00000519004 IGSF3O75054 1194 aa16.78■□□□□ 0.28
PABPC1-208ENST00000519004 AMER1Q5JTC6 1135 aaPredicted RBP16.78■□□□□ 0.28
PABPC1-208ENST00000519004 MCTP1Q6DN14 999 aa16.77■□□□□ 0.28
PABPC1-208ENST00000519004 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.77■□□□□ 0.282e-24■■■■■ 27.3
PABPC1-208ENST00000519004 FAM177BA6PVY3 158 aa16.77■□□□□ 0.27
PABPC1-208ENST00000519004 WDR7Q9Y4E6 1490 aa16.77■□□□□ 0.27
PABPC1-208ENST00000519004 BCL2L12Q9HB09 334 aa16.76■□□□□ 0.27
PABPC1-208ENST00000519004 DNTTIP2Q5QJE6 756 aaKnown RBP16.76■□□□□ 0.27
PABPC1-208ENST00000519004 ZBTB7CA1YPR0 619 aa16.75■□□□□ 0.27
PABPC1-208ENST00000519004 TMF1P82094 1093 aa16.75■□□□□ 0.27
PABPC1-208ENST00000519004 RBM27Q9P2N5 1060 aaKnown RBP16.75■□□□□ 0.27
PABPC1-208ENST00000519004 KIF3AQ9Y496 699 aa16.75■□□□□ 0.27
PABPC1-208ENST00000519004 WDR62O43379 1518 aa16.75■□□□□ 0.27
PABPC1-208ENST00000519004 ABCC10Q5T3U5 1492 aa16.74■□□□□ 0.27
PABPC1-208ENST00000519004 ITSN2Q9NZM3 1697 aa16.74■□□□□ 0.27
PABPC1-208ENST00000519004 CDK11BP21127 795 aaKnown RBP16.74■□□□□ 0.27
PABPC1-208ENST00000519004 IRX5P78411 483 aaPredicted RBP16.74■□□□□ 0.27
PABPC1-208ENST00000519004 LRSAM1Q6UWE0 723 aa16.74■□□□□ 0.27
PABPC1-208ENST00000519004 FTSJ3Q8IY81 847 aaKnown RBP16.74■□□□□ 0.27
PABPC1-208ENST00000519004 PDCL2Q8N4E4 241 aa16.74■□□□□ 0.27
PABPC1-208ENST00000519004 KNSTRNQ9Y448 316 aa16.74■□□□□ 0.27
PABPC1-208ENST00000519004 NGEFQ8N5V2 710 aa16.74■□□□□ 0.27
PABPC1-208ENST00000519004 GPT2Q8TD30 523 aa16.73■□□□□ 0.27
PABPC1-208ENST00000519004 ANKRD50Q9ULJ7 1429 aa16.73■□□□□ 0.27
PABPC1-208ENST00000519004 NUP155O75694 1391 aa16.73■□□□□ 0.27
PABPC1-208ENST00000519004 CROCC2H7BZ55 1655 aa16.73■□□□□ 0.27
PABPC1-208ENST00000519004 U2AF2P26368 475 aaKnown RBP eCLIP16.72■□□□□ 0.271e-22■□□□□ 11.3
PABPC1-208ENST00000519004 ZNF771Q7L3S4 317 aaPredicted RBP16.72■□□□□ 0.27
PABPC1-208ENST00000519004 PIBF1Q8WXW3 757 aa16.72■□□□□ 0.27
PABPC1-208ENST00000519004 POLA1P09884 1462 aaPredicted RBP16.72■□□□□ 0.27
PABPC1-208ENST00000519004 GRIN2AQ12879 1464 aa16.72■□□□□ 0.27
PABPC1-208ENST00000519004 WWC1Q8IX03 1113 aa16.72■□□□□ 0.27
PABPC1-208ENST00000519004 AK9Q5TCS8 1911 aa16.72■□□□□ 0.27
PABPC1-208ENST00000519004 ARID3CA6NKF2 412 aa16.71■□□□□ 0.27
PABPC1-208ENST00000519004 CYP2E1P05181 493 aaPredicted RBP16.71■□□□□ 0.27
PABPC1-208ENST00000519004 MVPQ14764 893 aaKnown RBP16.71■□□□□ 0.27
PABPC1-208ENST00000519004 RBM42Q9BTD8 480 aaKnown RBP16.71■□□□□ 0.27
PABPC1-208ENST00000519004 ANKRD7Q92527 254 aa16.7■□□□□ 0.26
PABPC1-208ENST00000519004 CADPSQ9ULU8 1353 aa16.7■□□□□ 0.26
PABPC1-208ENST00000519004 PTMAP06454 111 aaKnown RBP16.7■□□□□ 0.26
PABPC1-208ENST00000519004 HDAC1Q13547 482 aaPredicted RBP16.7■□□□□ 0.26
PABPC1-208ENST00000519004 NOLC1Q14978 699 aaKnown RBP eCLIP16.7■□□□□ 0.269e-10■■■■□ 20.6
PABPC1-208ENST00000519004 BCL2L13Q9BXK5 485 aa16.7■□□□□ 0.26
PABPC1-208ENST00000519004 TMEM63CQ9P1W3 806 aa16.7■□□□□ 0.26
PABPC1-208ENST00000519004 ASXL1Q8IXJ9 1541 aa16.7■□□□□ 0.26
PABPC1-208ENST00000519004 SYCE3A1L190 88 aa16.69■□□□□ 0.26
PABPC1-208ENST00000519004 SLC20A2Q08357 652 aa16.69■□□□□ 0.26
PABPC1-208ENST00000519004 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
PABPC1-208ENST00000519004 VGFO15240 615 aaPredicted RBP16.68■□□□□ 0.26
PABPC1-208ENST00000519004 KIF16BQ96L93 1317 aa16.68■□□□□ 0.26
PABPC1-208ENST00000519004 NUCB2P80303 420 aa16.67■□□□□ 0.26
PABPC1-208ENST00000519004 FKBP5Q13451 457 aaPredicted RBP16.67■□□□□ 0.26
PABPC1-208ENST00000519004 RNF214Q8ND24 703 aa16.67■□□□□ 0.26
PABPC1-208ENST00000519004 PRPF40AO75400 957 aaKnown RBP16.67■□□□□ 0.26
PABPC1-208ENST00000519004 KCNJ4P48050 445 aa16.67■□□□□ 0.26
PABPC1-208ENST00000519004 FEZ1Q99689 392 aa16.67■□□□□ 0.26
PABPC1-208ENST00000519004 SPTLC3Q9NUV7 552 aa16.67■□□□□ 0.26
PABPC1-208ENST00000519004 GABPB1Q06547 395 aaPredicted RBP16.66■□□□□ 0.26
PABPC1-208ENST00000519004 PKP1Q13835 747 aa16.66■□□□□ 0.26
PABPC1-208ENST00000519004 C17orf53Q8N3J3 647 aaPredicted RBP16.66■□□□□ 0.26
PABPC1-208ENST00000519004 OGFRQ9NZT2 677 aa16.65■□□□□ 0.26
PABPC1-208ENST00000519004 PTPRGP23470 1445 aa16.65■□□□□ 0.26
PABPC1-208ENST00000519004 A2MP01023 1474 aa16.65■□□□□ 0.26
PABPC1-208ENST00000519004 SYNMO15061 1565 aa16.65■□□□□ 0.26
PABPC1-208ENST00000519004 NSFL1CQ9UNZ2 370 aaKnown RBP16.65■□□□□ 0.26
PABPC1-208ENST00000519004 SLFN14P0C7P3 912 aa16.64■□□□□ 0.25
PABPC1-208ENST00000519004 NPC1L1Q9UHC9 1359 aa16.64■□□□□ 0.25
PABPC1-208ENST00000519004 LAMC3Q9Y6N6 1575 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms