RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 PRAM1Q96QH2 718 aa31.57■■■□□ 2.64
VEGFA-217ENST00000518538 CDC42BPGQ6DT37 1551 aa31.56■■■□□ 2.64
VEGFA-217ENST00000518538 HSPA1LP34931 641 aa31.56■■■□□ 2.64
VEGFA-217ENST00000518538 NBPF1Q3BBV0 1214 aa31.56■■■□□ 2.64
VEGFA-217ENST00000518538 TRPM1Q7Z4N2 1603 aa31.54■■■□□ 2.64
VEGFA-217ENST00000518538 POGKQ9P215 609 aa31.53■■■□□ 2.64
VEGFA-217ENST00000518538 CCER1Q8TC90 406 aaPredicted RBP31.51■■■□□ 2.63
VEGFA-217ENST00000518538 ARHGEF28Q8N1W1 1705 aaKnown RBP31.5■■■□□ 2.63
VEGFA-217ENST00000518538 NBPF8Q3BBV2 869 aa31.5■■■□□ 2.63
VEGFA-217ENST00000518538 C1orf167Q5SNV9 1468 aa31.49■■■□□ 2.63
VEGFA-217ENST00000518538 SAFB2Q14151 953 aaKnown RBP eCLIP31.49■■■□□ 2.63
VEGFA-217ENST00000518538 BRINP3Q76B58 766 aa31.47■■■□□ 2.63
VEGFA-217ENST00000518538 ROCK2O75116 1388 aaKnown RBP31.46■■■□□ 2.63
VEGFA-217ENST00000518538 ADGRB2O60241 1585 aa31.45■■■□□ 2.63
VEGFA-217ENST00000518538 FMN2Q9NZ56 1722 aa31.42■■■□□ 2.62
VEGFA-217ENST00000518538 TIMELESSQ9UNS1 1208 aa31.42■■■□□ 2.62
VEGFA-217ENST00000518538 AHDC1Q5TGY3 1603 aaPredicted RBP31.41■■■□□ 2.62
VEGFA-217ENST00000518538 GPRASP1Q5JY77 1395 aa31.41■■■□□ 2.62
VEGFA-217ENST00000518538 RALGAPBQ86X10 1494 aa31.4■■■□□ 2.62
VEGFA-217ENST00000518538 MINK1Q8N4C8 1332 aaPredicted RBP31.39■■■□□ 2.62
VEGFA-217ENST00000518538 PHLPP1O60346 1717 aa31.38■■■□□ 2.61
VEGFA-217ENST00000518538 ORAI2Q96SN7 254 aa31.36■■■□□ 2.61
VEGFA-217ENST00000518538 HIRIP3Q9BW71 556 aaPredicted RBP31.36■■■□□ 2.61
VEGFA-217ENST00000518538 NUTM2FA1L443 756 aa31.34■■■□□ 2.61
VEGFA-217ENST00000518538 COL16A1Q07092 1604 aaPredicted RBP31.34■■■□□ 2.61
VEGFA-217ENST00000518538 NHSL1Q5SYE7 1610 aa31.34■■■□□ 2.61
VEGFA-217ENST00000518538 CENPJQ9HC77 1338 aaPredicted RBP31.33■■■□□ 2.61
VEGFA-217ENST00000518538 ESCO1Q5FWF5 840 aa31.33■■■□□ 2.61
VEGFA-217ENST00000518538 EIF3AQ14152 1382 aaKnown RBP31.31■■■□□ 2.6
VEGFA-217ENST00000518538 WASLO00401 505 aaPredicted RBP31.31■■■□□ 2.6
VEGFA-217ENST00000518538 CARD11Q9BXL7 1154 aa31.31■■■□□ 2.6
VEGFA-217ENST00000518538 ANKARQ7Z5J8 1434 aa31.31■■■□□ 2.6
VEGFA-217ENST00000518538 TULP4Q9NRJ4 1543 aa31.28■■■□□ 2.6
VEGFA-217ENST00000518538 QRICH2Q9H0J4 1663 aa31.27■■■□□ 2.6
VEGFA-217ENST00000518538 DDX17Q92841 729 aaKnown RBP31.26■■■□□ 2.59
VEGFA-217ENST00000518538 USP32Q8NFA0 1604 aa31.26■■■□□ 2.59
VEGFA-217ENST00000518538 KIF1AQ12756 1690 aa31.25■■■□□ 2.59
VEGFA-217ENST00000518538 RGPD8O14715 1765 aaPredicted RBP31.23■■■□□ 2.59
VEGFA-217ENST00000518538 JCADQ9P266 1359 aa31.23■■■□□ 2.59
VEGFA-217ENST00000518538 NPHP3Q7Z494 1330 aa31.23■■■□□ 2.59
VEGFA-217ENST00000518538 PRR36Q9H6K5 1346 aa31.22■■■□□ 2.59
VEGFA-217ENST00000518538 CDK19Q9BWU1 502 aa31.21■■■□□ 2.59
VEGFA-217ENST00000518538 SOS2Q07890 1332 aaPredicted RBP31.21■■■□□ 2.59
VEGFA-217ENST00000518538 PHF8Q9UPP1 1060 aa31.2■■■□□ 2.59
VEGFA-217ENST00000518538 FOXO3O43524 673 aa31.19■■■□□ 2.58
VEGFA-217ENST00000518538 LRRC59Q96AG4 307 aaKnown RBP31.18■■■□□ 2.58
VEGFA-217ENST00000518538 ATP7BP35670 1465 aa31.18■■■□□ 2.58
VEGFA-217ENST00000518538 PXDNQ92626 1479 aa31.16■■■□□ 2.58
VEGFA-217ENST00000518538 SHPRHQ149N8 1683 aa31.16■■■□□ 2.58
VEGFA-217ENST00000518538 NUDT16Q96DE0 195 aaKnown RBP31.15■■■□□ 2.58
VEGFA-217ENST00000518538 SBNO2Q9Y2G9 1366 aa31.15■■■□□ 2.58
VEGFA-217ENST00000518538 MED1Q15648 1581 aaPredicted RBP31.14■■■□□ 2.58
VEGFA-217ENST00000518538 ITSN1Q15811 1721 aa31.12■■■□□ 2.57
VEGFA-217ENST00000518538 EVC2Q86UK5 1308 aa31.12■■■□□ 2.57
VEGFA-217ENST00000518538 SRPK2P78362 688 aaKnown RBP31.11■■■□□ 2.57
VEGFA-217ENST00000518538 PMFBP1Q8TBY8 1022 aa31.11■■■□□ 2.57
VEGFA-217ENST00000518538 SPATA31A6Q5VVP1 1343 aa31.1■■■□□ 2.57
VEGFA-217ENST00000518538 XPCQ01831 940 aaPredicted RBP31.1■■■□□ 2.57
VEGFA-217ENST00000518538 TOPAZ1Q8N9V7 1692 aa31.09■■■□□ 2.57
VEGFA-217ENST00000518538 CCDC61Q9Y6R9 512 aa31.09■■■□□ 2.57
VEGFA-217ENST00000518538 PNPLA6Q8IY17 1366 aa31.08■■■□□ 2.57
VEGFA-217ENST00000518538 CABP2Q9NPB3 220 aa31.08■■■□□ 2.57
VEGFA-217ENST00000518538 KRT28Q7Z3Y7 464 aa31.07■■■□□ 2.56
VEGFA-217ENST00000518538 USP47Q96K76 1375 aa31.05■■■□□ 2.56
VEGFA-217ENST00000518538 PSME1Q06323 249 aa31.04■■■□□ 2.56
VEGFA-217ENST00000518538 ST20-MTHFSA0A0A6YYL1 179 aa31.03■■■□□ 2.56
VEGFA-217ENST00000518538 NGDNQ8NEJ9 315 aaKnown RBP31.03■■■□□ 2.56
VEGFA-217ENST00000518538 SBNO1A3KN83 1393 aa31.02■■■□□ 2.56
VEGFA-217ENST00000518538 PPIP5K1Q6PFW1 1433 aa31.01■■■□□ 2.55
VEGFA-217ENST00000518538 PLEKHG3A1L390 1219 aa31.01■■■□□ 2.55
VEGFA-217ENST00000518538 DISP3Q9P2K9 1392 aa31.01■■■□□ 2.55
VEGFA-217ENST00000518538 SPATA31A3Q5VYP0 1347 aa31■■■□□ 2.55
VEGFA-217ENST00000518538 POLR3AO14802 1390 aaPredicted RBP31■■■□□ 2.55
VEGFA-217ENST00000518538 LRP6O75581 1613 aa30.99■■■□□ 2.55
VEGFA-217ENST00000518538 COL22A1Q8NFW1 1626 aaPredicted RBP30.99■■■□□ 2.55
VEGFA-217ENST00000518538 TESK2Q96S53 571 aa30.99■■■□□ 2.55
VEGFA-217ENST00000518538 TNS3Q68CZ2 1445 aa30.98■■■□□ 2.55
VEGFA-217ENST00000518538 ATAD2Q6PL18 1390 aa30.97■■■□□ 2.55
VEGFA-217ENST00000518538 SLC24A1O60721 1099 aa30.97■■■□□ 2.55
VEGFA-217ENST00000518538 ACEP12821 1306 aa30.97■■■□□ 2.55
VEGFA-217ENST00000518538 TRPM3Q9HCF6 1732 aaPredicted RBP30.96■■■□□ 2.55
VEGFA-217ENST00000518538 NUTM2BA6NNL0 878 aaPredicted RBP30.95■■■□□ 2.55
VEGFA-217ENST00000518538 NUTM2EB1AL46 878 aaPredicted RBP30.95■■■□□ 2.55
VEGFA-217ENST00000518538 NUTM2AQ8IVF1 878 aaPredicted RBP30.95■■■□□ 2.55
VEGFA-217ENST00000518538 PHF23Q9BUL5 403 aaPredicted RBP30.93■■■□□ 2.54
VEGFA-217ENST00000518538 CABP1Q9NZU7 370 aa30.93■■■□□ 2.54
VEGFA-217ENST00000518538 ARHGEF10O15013 1369 aa30.92■■■□□ 2.54
VEGFA-217ENST00000518538 PUS7Q96PZ0 661 aaKnown RBP30.91■■■□□ 2.54
VEGFA-217ENST00000518538 MEX3CQ5U5Q3 659 aaKnown RBP30.9■■■□□ 2.54
VEGFA-217ENST00000518538 ALS2Q96Q42 1657 aa30.88■■■□□ 2.53
VEGFA-217ENST00000518538 LMOD2Q6P5Q4 547 aa30.87■■■□□ 2.53
VEGFA-217ENST00000518538 PAK3O75914 559 aaPredicted RBP30.86■■■□□ 2.53
VEGFA-217ENST00000518538 TMF1P82094 1093 aa30.86■■■□□ 2.53
VEGFA-217ENST00000518538 BRD4O60885 1362 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-217ENST00000518538 USP6P35125 1406 aa30.83■■■□□ 2.53
VEGFA-217ENST00000518538 EIF4G2P78344 907 aaKnown RBP eCLIP30.83■■■□□ 2.53
VEGFA-217ENST00000518538 ADAMTS2O95450 1211 aa30.81■■■□□ 2.52
VEGFA-217ENST00000518538 ZNF692Q9BU19 519 aaPredicted RBP30.8■■■□□ 2.52
VEGFA-217ENST00000518538 RGS17Q9UGC6 210 aaPredicted RBP30.8■■■□□ 2.52
VEGFA-217ENST00000518538 CPSF1Q10570 1443 aaKnown RBP30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms