RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 STK26Q9P289 416 aa17.98■□□□□ 0.47
MRPS28-202ENST00000518271 RGPD8O14715 1765 aaPredicted RBP17.98■□□□□ 0.47
MRPS28-202ENST00000518271 RGS17Q9UGC6 210 aaPredicted RBP17.97■□□□□ 0.47
MRPS28-202ENST00000518271 WAPLQ7Z5K2 1190 aa17.96■□□□□ 0.47
MRPS28-202ENST00000518271 ARHGEF28Q8N1W1 1705 aaKnown RBP17.95■□□□□ 0.46
MRPS28-202ENST00000518271 KIAA1210Q9ULL0 1709 aa17.95■□□□□ 0.46
MRPS28-202ENST00000518271 DDX17Q92841 729 aaKnown RBP17.95■□□□□ 0.46
MRPS28-202ENST00000518271 ADGRB2O60241 1585 aa17.95■□□□□ 0.46
MRPS28-202ENST00000518271 USP32Q8NFA0 1604 aa17.93■□□□□ 0.46
MRPS28-202ENST00000518271 ORAI2Q96SN7 254 aa17.92■□□□□ 0.46
MRPS28-202ENST00000518271 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
MRPS28-202ENST00000518271 KIF1AQ12756 1690 aa17.91■□□□□ 0.46
MRPS28-202ENST00000518271 DCAF11Q8TEB1 546 aa17.91■□□□□ 0.46
MRPS28-202ENST00000518271 SIRT1Q96EB6 747 aa17.91■□□□□ 0.46
MRPS28-202ENST00000518271 COL22A1Q8NFW1 1626 aaPredicted RBP17.9■□□□□ 0.46
MRPS28-202ENST00000518271 PXDNQ92626 1479 aa17.9■□□□□ 0.46
MRPS28-202ENST00000518271 SOCS7O14512 581 aa17.9■□□□□ 0.46
MRPS28-202ENST00000518271 SPATA31A6Q5VVP1 1343 aa17.9■□□□□ 0.46
MRPS28-202ENST00000518271 PNPLA6Q8IY17 1366 aa17.9■□□□□ 0.46
MRPS28-202ENST00000518271 KDM2AQ9Y2K7 1162 aa17.89■□□□□ 0.45
MRPS28-202ENST00000518271 SOS2Q07890 1332 aaPredicted RBP17.89■□□□□ 0.45
MRPS28-202ENST00000518271 STAC3Q96MF2 364 aa17.86■□□□□ 0.45
MRPS28-202ENST00000518271 PRAM1Q96QH2 718 aa17.86■□□□□ 0.45
MRPS28-202ENST00000518271 POTEAQ6S8J7 498 aa17.85■□□□□ 0.45
MRPS28-202ENST00000518271 MARF1Q9Y4F3 1742 aaKnown RBP17.84■□□□□ 0.45
MRPS28-202ENST00000518271 NUTM2FA1L443 756 aa17.83■□□□□ 0.44
MRPS28-202ENST00000518271 LRRC59Q96AG4 307 aaKnown RBP17.83■□□□□ 0.44
MRPS28-202ENST00000518271 SAFB2Q14151 953 aaKnown RBP eCLIP17.82■□□□□ 0.44
MRPS28-202ENST00000518271 TRAK1Q9UPV9 953 aa17.82■□□□□ 0.44
MRPS28-202ENST00000518271 TRPM1Q7Z4N2 1603 aa17.82■□□□□ 0.44
MRPS28-202ENST00000518271 ESCO1Q5FWF5 840 aa17.81■□□□□ 0.44
MRPS28-202ENST00000518271 ABCA3Q99758 1704 aa17.81■□□□□ 0.44
MRPS28-202ENST00000518271 TRPM3Q9HCF6 1732 aaPredicted RBP17.81■□□□□ 0.44
MRPS28-202ENST00000518271 NPHP3Q7Z494 1330 aa17.8■□□□□ 0.44
MRPS28-202ENST00000518271 TULP4Q9NRJ4 1543 aa17.8■□□□□ 0.44
MRPS28-202ENST00000518271 ANKARQ7Z5J8 1434 aa17.8■□□□□ 0.44
MRPS28-202ENST00000518271 ITSN1Q15811 1721 aa17.79■□□□□ 0.44
MRPS28-202ENST00000518271 SIN3AQ96ST3 1273 aa17.79■□□□□ 0.44
MRPS28-202ENST00000518271 TOPAZ1Q8N9V7 1692 aa17.79■□□□□ 0.44
MRPS28-202ENST00000518271 NUTM2BA6NNL0 878 aaPredicted RBP17.77■□□□□ 0.44
MRPS28-202ENST00000518271 NUTM2EB1AL46 878 aaPredicted RBP17.77■□□□□ 0.44
MRPS28-202ENST00000518271 FOXO3O43524 673 aa17.77■□□□□ 0.44
MRPS28-202ENST00000518271 XPCQ01831 940 aaPredicted RBP17.77■□□□□ 0.44
MRPS28-202ENST00000518271 NUTM2AQ8IVF1 878 aaPredicted RBP17.77■□□□□ 0.44
MRPS28-202ENST00000518271 POGKQ9P215 609 aa17.77■□□□□ 0.44
MRPS28-202ENST00000518271 ATP7BP35670 1465 aa17.76■□□□□ 0.43
MRPS28-202ENST00000518271 PRR36Q9H6K5 1346 aa17.76■□□□□ 0.43
MRPS28-202ENST00000518271 NBPF1Q3BBV0 1214 aa17.76■□□□□ 0.43
MRPS28-202ENST00000518271 QRICH2Q9H0J4 1663 aa17.76■□□□□ 0.43
MRPS28-202ENST00000518271 MINK1Q8N4C8 1332 aaPredicted RBP17.75■□□□□ 0.43
MRPS28-202ENST00000518271 ALS2Q96Q42 1657 aa17.75■□□□□ 0.43
MRPS28-202ENST00000518271 L3MBTL2Q969R5 705 aa17.75■□□□□ 0.43
MRPS28-202ENST00000518271 HIRIP3Q9BW71 556 aaPredicted RBP17.75■□□□□ 0.43
MRPS28-202ENST00000518271 MEX3CQ5U5Q3 659 aaKnown RBP17.74■□□□□ 0.43
MRPS28-202ENST00000518271 CRYBG1Q9Y4K1 1723 aa17.74■□□□□ 0.43
MRPS28-202ENST00000518271 PHF8Q9UPP1 1060 aa17.73■□□□□ 0.43
MRPS28-202ENST00000518271 AFF2P51816 1311 aa17.72■□□□□ 0.43
MRPS28-202ENST00000518271 TNS3Q68CZ2 1445 aa17.72■□□□□ 0.43
MRPS28-202ENST00000518271 TRIM26Q12899 539 aaPredicted RBP17.72■□□□□ 0.43
MRPS28-202ENST00000518271 SPATA31A3Q5VYP0 1347 aa17.72■□□□□ 0.43
MRPS28-202ENST00000518271 WASLO00401 505 aaPredicted RBP17.71■□□□□ 0.43
MRPS28-202ENST00000518271 EIF3AQ14152 1382 aaKnown RBP17.7■□□□□ 0.42
MRPS28-202ENST00000518271 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.69■□□□□ 0.42
MRPS28-202ENST00000518271 ZNF772Q68DY9 489 aaPredicted RBP17.69■□□□□ 0.42
MRPS28-202ENST00000518271 SBNO1A3KN83 1393 aa17.68■□□□□ 0.42
MRPS28-202ENST00000518271 ADAMTS2O95450 1211 aa17.68■□□□□ 0.42
MRPS28-202ENST00000518271 KRT28Q7Z3Y7 464 aa17.68■□□□□ 0.42
MRPS28-202ENST00000518271 C8orf37Q96NL8 207 aa17.68■□□□□ 0.42
MRPS28-202ENST00000518271 NEUROD1Q13562 356 aa17.67■□□□□ 0.42
MRPS28-202ENST00000518271 PMFBP1Q8TBY8 1022 aa17.67■□□□□ 0.42
MRPS28-202ENST00000518271 PLCH1Q4KWH8 1693 aa17.67■□□□□ 0.42
MRPS28-202ENST00000518271 CDK12Q9NYV4 1490 aaPredicted RBP17.66■□□□□ 0.42
MRPS28-202ENST00000518271 NBPF8Q3BBV2 869 aa17.64■□□□□ 0.41
MRPS28-202ENST00000518271 GPRASP1Q5JY77 1395 aa17.64■□□□□ 0.41
MRPS28-202ENST00000518271 RGS12O14924 1447 aa17.64■□□□□ 0.41
MRPS28-202ENST00000518271 ATRNO75882 1429 aa17.64■□□□□ 0.41
MRPS28-202ENST00000518271 BCL9LQ86UU0 1499 aa17.63■□□□□ 0.41
MRPS28-202ENST00000518271 FNBP4Q8N3X1 1017 aaPredicted RBP17.63■□□□□ 0.41
MRPS28-202ENST00000518271 EP400Q96L91 3159 aa17.63■□□□□ 0.41
MRPS28-202ENST00000518271 CENPJQ9HC77 1338 aaPredicted RBP17.63■□□□□ 0.41
MRPS28-202ENST00000518271 NWD2Q9ULI1 1742 aa17.63■□□□□ 0.41
MRPS28-202ENST00000518271 SLIT2O94813 1529 aa17.62■□□□□ 0.41
MRPS28-202ENST00000518271 PHRF1Q9P1Y6 1649 aaKnown RBP17.62■□□□□ 0.41
MRPS28-202ENST00000518271 NRAPQ86VF7 1730 aa17.62■□□□□ 0.41
MRPS28-202ENST00000518271 NUDT16Q96DE0 195 aaKnown RBP17.62■□□□□ 0.41
MRPS28-202ENST00000518271 CDK19Q9BWU1 502 aa17.62■□□□□ 0.41
MRPS28-202ENST00000518271 RALGAPBQ86X10 1494 aa17.62■□□□□ 0.41
MRPS28-202ENST00000518271 NGLY1Q96IV0 654 aa17.61■□□□□ 0.41
MRPS28-202ENST00000518271 POLR3AO14802 1390 aaPredicted RBP17.61■□□□□ 0.41
MRPS28-202ENST00000518271 ARHGEF10O15013 1369 aa17.61■□□□□ 0.41
MRPS28-202ENST00000518271 PSME1Q06323 249 aa17.6■□□□□ 0.41
MRPS28-202ENST00000518271 ROCK2O75116 1388 aaKnown RBP17.6■□□□□ 0.41
MRPS28-202ENST00000518271 GLI3P10071 1580 aa17.59■□□□□ 0.41
MRPS28-202ENST00000518271 CABLES1Q8TDN4 633 aa17.59■□□□□ 0.41
MRPS28-202ENST00000518271 RXRBP28702 533 aa17.58■□□□□ 0.4
MRPS28-202ENST00000518271 QTRT2Q9H974 415 aaKnown RBP17.58■□□□□ 0.4
MRPS28-202ENST00000518271 USP21Q9UK80 565 aa17.57■□□□□ 0.4
MRPS28-202ENST00000518271 AKAP12Q02952 1782 aa17.57■□□□□ 0.4
MRPS28-202ENST00000518271 RBM6P78332 1123 aaKnown RBP17.56■□□□□ 0.4
MRPS28-202ENST00000518271 COL14A1Q05707 1796 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms