RNA–Protein interactions for RNA: ENST00000518179.1

IGKV2D-23-201, Transcript of immunoglobulin kappa variable 2D-23 (pseudogene), humanhuman

BASIC

Gene IGKV2D-23, Length 286 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-23-201ENST00000518179 DACH1Q9UI36 760 aa6.72□□□□□ -1.33
IGKV2D-23-201ENST00000518179 FUT2Q10981 343 aa6.71□□□□□ -1.34
IGKV2D-23-201ENST00000518179 GMPR2Q9P2T1 348 aaKnown RBP6.71□□□□□ -1.34
IGKV2D-23-201ENST00000518179 TTC24A2A3L6 582 aaPredicted RBP6.7□□□□□ -1.34
IGKV2D-23-201ENST00000518179 WNT7AO00755 349 aa6.7□□□□□ -1.34
IGKV2D-23-201ENST00000518179 GCGRP47871 477 aa6.7□□□□□ -1.34
IGKV2D-23-201ENST00000518179 GRIPAP1Q4V328 841 aa6.7□□□□□ -1.34
IGKV2D-23-201ENST00000518179 MSS51Q4VC12 460 aa6.7□□□□□ -1.34
IGKV2D-23-201ENST00000518179 BRICD5Q6PL45 260 aa6.7□□□□□ -1.34
IGKV2D-23-201ENST00000518179 RDH13Q8NBN7 331 aa6.7□□□□□ -1.34
IGKV2D-23-201ENST00000518179 SNIP1Q8TAD8 396 aaKnown RBP6.7□□□□□ -1.34
IGKV2D-23-201ENST00000518179 SMYD5Q6GMV2 418 aa6.69□□□□□ -1.34
IGKV2D-23-201ENST00000518179 SENP2Q9HC62 589 aa6.69□□□□□ -1.34
IGKV2D-23-201ENST00000518179 SLC27A5Q9Y2P5 690 aa6.69□□□□□ -1.34
IGKV2D-23-201ENST00000518179 GNPATO15228 680 aa6.68□□□□□ -1.34
IGKV2D-23-201ENST00000518179 DDX11L8A8MPP1 907 aa6.67□□□□□ -1.34
IGKV2D-23-201ENST00000518179 SEMA3EO15041 775 aa6.67□□□□□ -1.34
IGKV2D-23-201ENST00000518179 Q3C1V9 767 aa6.67□□□□□ -1.34
IGKV2D-23-201ENST00000518179 REPIN1Q9BWE0 567 aaKnown RBP6.67□□□□□ -1.34
IGKV2D-23-201ENST00000518179 SMPD1P17405 629 aa6.66□□□□□ -1.34
IGKV2D-23-201ENST00000518179 HOMEZQ8IX15 550 aa6.66□□□□□ -1.34
IGKV2D-23-201ENST00000518179 KIFC2Q96AC6 838 aa6.66□□□□□ -1.34
IGKV2D-23-201ENST00000518179 TRIM47Q96LD4 638 aa6.66□□□□□ -1.34
IGKV2D-23-201ENST00000518179 ATP13A2Q9NQ11 1180 aa6.66□□□□□ -1.34
IGKV2D-23-201ENST00000518179 TERTO14746 1132 aaKnown RBP6.65□□□□□ -1.34
IGKV2D-23-201ENST00000518179 MMP16P51512 607 aa6.65□□□□□ -1.34
IGKV2D-23-201ENST00000518179 TRIM32Q13049 653 aa6.64□□□□□ -1.35
IGKV2D-23-201ENST00000518179 TESPA1A2RU30 521 aaPredicted RBP6.63□□□□□ -1.35
IGKV2D-23-201ENST00000518179 FAM181BA6NEQ2 426 aa6.62□□□□□ -1.35
IGKV2D-23-201ENST00000518179 FECHP22830 423 aa6.62□□□□□ -1.35
IGKV2D-23-201ENST00000518179 MRGPRX2Q96LB1 330 aa6.62□□□□□ -1.35
IGKV2D-23-201ENST00000518179 PRDM9Q9NQV7 894 aa6.62□□□□□ -1.35
IGKV2D-23-201ENST00000518179 RNF19BQ6ZMZ0 732 aa6.61□□□□□ -1.35
IGKV2D-23-201ENST00000518179 GPR37O15354 613 aa6.6□□□□□ -1.35
IGKV2D-23-201ENST00000518179 DXOO77932 396 aaKnown RBP6.6□□□□□ -1.35
IGKV2D-23-201ENST00000518179 SNRPBP14678 240 aaKnown RBP6.6□□□□□ -1.35
IGKV2D-23-201ENST00000518179 WNT7BP56706 349 aa6.6□□□□□ -1.35
IGKV2D-23-201ENST00000518179 RBM26Q5T8P6 1007 aaKnown RBP6.6□□□□□ -1.35
IGKV2D-23-201ENST00000518179 C14orf37Q86TY3 774 aa6.6□□□□□ -1.35
IGKV2D-23-201ENST00000518179 NPAS3Q8IXF0 933 aa6.6□□□□□ -1.35
IGKV2D-23-201ENST00000518179 SLC16A10Q8TF71 515 aa6.6□□□□□ -1.35
IGKV2D-23-201ENST00000518179 USB1Q9BQ65 265 aaKnown RBP6.6□□□□□ -1.35
IGKV2D-23-201ENST00000518179 J3QL48 77 aa6.59□□□□□ -1.35
IGKV2D-23-201ENST00000518179 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.59□□□□□ -1.35
IGKV2D-23-201ENST00000518179 USP46P62068 366 aa6.58□□□□□ -1.36
IGKV2D-23-201ENST00000518179 HPS1Q92902 700 aa6.58□□□□□ -1.36
IGKV2D-23-201ENST00000518179 RC3H1Q5TC82 1133 aaKnown RBP6.57□□□□□ -1.36
IGKV2D-23-201ENST00000518179 PHOX2BQ99453 314 aa6.57□□□□□ -1.36
IGKV2D-23-201ENST00000518179 KDM4AO75164 1064 aa6.56□□□□□ -1.36
IGKV2D-23-201ENST00000518179 CD46P15529 392 aa6.56□□□□□ -1.36
IGKV2D-23-201ENST00000518179 LCE2CQ5TA81 110 aa6.56□□□□□ -1.36
IGKV2D-23-201ENST00000518179 NXF1Q9UBU9 619 aaKnown RBP6.56□□□□□ -1.36
IGKV2D-23-201ENST00000518179 NLRP7Q8WX94 980 aa6.54□□□□□ -1.36
IGKV2D-23-201ENST00000518179 IRF7Q92985 503 aa6.54□□□□□ -1.36
IGKV2D-23-201ENST00000518179 BRPF1P55201 1214 aaPredicted RBP6.53□□□□□ -1.36
IGKV2D-23-201ENST00000518179 SKOR1P84550 965 aa6.52□□□□□ -1.37
IGKV2D-23-201ENST00000518179 CCDC24Q8N4L8 307 aa6.52□□□□□ -1.37
IGKV2D-23-201ENST00000518179 SIAH2O43255 324 aa6.51□□□□□ -1.37
IGKV2D-23-201ENST00000518179 ALDH1A1P00352 501 aa6.51□□□□□ -1.37
IGKV2D-23-201ENST00000518179 GPIHBP1Q8IV16 184 aa6.51□□□□□ -1.37
IGKV2D-23-201ENST00000518179 ZSCAN1Q8NBB4 408 aa6.51□□□□□ -1.37
IGKV2D-23-201ENST00000518179 CAPN5O15484 640 aaPredicted RBP6.49□□□□□ -1.37
IGKV2D-23-201ENST00000518179 JUNDP17535 347 aa6.49□□□□□ -1.37
IGKV2D-23-201ENST00000518179 MAP2K5Q13163 448 aa6.49□□□□□ -1.37
IGKV2D-23-201ENST00000518179 EHBP1Q8NDI1 1231 aa6.49□□□□□ -1.37
IGKV2D-23-201ENST00000518179 H3BM21 787 aa6.48□□□□□ -1.37
IGKV2D-23-201ENST00000518179 HOXA2O43364 376 aa6.48□□□□□ -1.37
IGKV2D-23-201ENST00000518179 GMPRP36959 345 aa6.48□□□□□ -1.37
IGKV2D-23-201ENST00000518179 WASF2Q9Y6W5 498 aa6.48□□□□□ -1.37
IGKV2D-23-201ENST00000518179 NISCHQ9Y2I1 1504 aa6.47□□□□□ -1.37
IGKV2D-23-201ENST00000518179 IRF6O14896 467 aa6.47□□□□□ -1.37
IGKV2D-23-201ENST00000518179 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
IGKV2D-23-201ENST00000518179 RETREG3Q86VR2 466 aa6.47□□□□□ -1.37
IGKV2D-23-201ENST00000518179 MPNDQ8N594 471 aa6.47□□□□□ -1.37
IGKV2D-23-201ENST00000518179 NUDT12Q9BQG2 462 aa6.47□□□□□ -1.37
IGKV2D-23-201ENST00000518179 TRIM46Q7Z4K8 759 aa6.46□□□□□ -1.38
IGKV2D-23-201ENST00000518179 MINK1Q8N4C8 1332 aaPredicted RBP6.46□□□□□ -1.38
IGKV2D-23-201ENST00000518179 PLEKHG3A1L390 1219 aa6.45□□□□□ -1.38
IGKV2D-23-201ENST00000518179 ZC3H15Q8WU90 426 aaKnown RBP6.45□□□□□ -1.38
IGKV2D-23-201ENST00000518179 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
IGKV2D-23-201ENST00000518179 CCNYL3P0C7X3 344 aa6.43□□□□□ -1.38
IGKV2D-23-201ENST00000518179 BMP1P13497 986 aa6.43□□□□□ -1.38
IGKV2D-23-201ENST00000518179 CLCN1P35523 988 aa6.43□□□□□ -1.38
IGKV2D-23-201ENST00000518179 PTCRAQ6ISU1 281 aaPredicted RBP6.43□□□□□ -1.38
IGKV2D-23-201ENST00000518179 HLA-CQ95604 372 aa6.43□□□□□ -1.38
IGKV2D-23-201ENST00000518179 KRTAP4-6Q9BYQ5 205 aa6.43□□□□□ -1.38
IGKV2D-23-201ENST00000518179 VARSP26640 1264 aaKnown RBP6.42□□□□□ -1.38
IGKV2D-23-201ENST00000518179 SH3BP2P78314 561 aa6.42□□□□□ -1.38
IGKV2D-23-201ENST00000518179 MDM2Q00987 491 aaPredicted RBP6.42□□□□□ -1.38
IGKV2D-23-201ENST00000518179 PTPRNQ16849 979 aa6.42□□□□□ -1.38
IGKV2D-23-201ENST00000518179 NUTM1Q86Y26 1132 aa6.42□□□□□ -1.38
IGKV2D-23-201ENST00000518179 ZFP42Q96MM3 310 aa6.42□□□□□ -1.38
IGKV2D-23-201ENST00000518179 GPCPD1Q9NPB8 672 aa6.42□□□□□ -1.38
IGKV2D-23-201ENST00000518179 EVA1BQ9NVM1 165 aa6.42□□□□□ -1.38
IGKV2D-23-201ENST00000518179 VSIG8P0DPA2 414 aa6.41□□□□□ -1.38
IGKV2D-23-201ENST00000518179 MS4A1P11836 297 aa6.41□□□□□ -1.38
IGKV2D-23-201ENST00000518179 SCARF1Q14162 830 aa6.41□□□□□ -1.38
IGKV2D-23-201ENST00000518179 FAM217BQ9NTX9 383 aaPredicted RBP6.41□□□□□ -1.38
IGKV2D-23-201ENST00000518179 NEUROD2Q15784 382 aa6.4□□□□□ -1.38
IGKV2D-23-201ENST00000518179 DESI1Q6ICB0 168 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms