RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 USP32Q8NFA0 1604 aa16.85■□□□□ 0.29
AP3B1-203ENST00000517940 FMN2Q9NZ56 1722 aa16.84■□□□□ 0.29
AP3B1-203ENST00000517940 SAFB2Q14151 953 aaKnown RBP eCLIP16.83■□□□□ 0.28
AP3B1-203ENST00000517940 CERKQ8TCT0 537 aa16.83■□□□□ 0.28
AP3B1-203ENST00000517940 TESK2Q96S53 571 aa16.82■□□□□ 0.28
AP3B1-203ENST00000517940 DCCP43146 1447 aa16.81■□□□□ 0.28
AP3B1-203ENST00000517940 CENPJQ9HC77 1338 aaPredicted RBP16.81■□□□□ 0.28
AP3B1-203ENST00000517940 RGPD8O14715 1765 aaPredicted RBP16.81■□□□□ 0.28
AP3B1-203ENST00000517940 SBNO2Q9Y2G9 1366 aa16.8■□□□□ 0.28
AP3B1-203ENST00000517940 MST1RQ04912 1400 aa16.79■□□□□ 0.28
AP3B1-203ENST00000517940 MINK1Q8N4C8 1332 aaPredicted RBP16.79■□□□□ 0.28
AP3B1-203ENST00000517940 ST20-MTHFSA0A0A6YYL1 179 aa16.79■□□□□ 0.28
AP3B1-203ENST00000517940 HIRIP3Q9BW71 556 aaPredicted RBP16.79■□□□□ 0.28
AP3B1-203ENST00000517940 TOPAZ1Q8N9V7 1692 aa16.78■□□□□ 0.28
AP3B1-203ENST00000517940 EIF3AQ14152 1382 aaKnown RBP16.77■□□□□ 0.28
AP3B1-203ENST00000517940 C19orf44Q9H6X5 657 aa16.77■□□□□ 0.28
AP3B1-203ENST00000517940 POGKQ9P215 609 aa16.77■□□□□ 0.28
AP3B1-203ENST00000517940 MSH6P52701 1360 aa16.77■□□□□ 0.27
AP3B1-203ENST00000517940 PRR36Q9H6K5 1346 aa16.76■□□□□ 0.27
AP3B1-203ENST00000517940 ATP7BP35670 1465 aa16.76■□□□□ 0.27
AP3B1-203ENST00000517940 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
AP3B1-203ENST00000517940 DISP3Q9P2K9 1392 aa16.75■□□□□ 0.27
AP3B1-203ENST00000517940 C1orf167Q5SNV9 1468 aa16.74■□□□□ 0.27
AP3B1-203ENST00000517940 WASLO00401 505 aaPredicted RBP16.72■□□□□ 0.27
AP3B1-203ENST00000517940 ZEB1P37275 1124 aaPredicted RBP16.72■□□□□ 0.27
AP3B1-203ENST00000517940 ROBO1Q9Y6N7 1651 aa16.72■□□□□ 0.27
AP3B1-203ENST00000517940 C14orf37Q86TY3 774 aa16.71■□□□□ 0.27
AP3B1-203ENST00000517940 MYOM1P52179 1685 aa16.71■□□□□ 0.27
AP3B1-203ENST00000517940 ANKARQ7Z5J8 1434 aa16.7■□□□□ 0.26
AP3B1-203ENST00000517940 C11orf95C9JLR9 678 aaPredicted RBP16.7■□□□□ 0.26
AP3B1-203ENST00000517940 EIF4G2P78344 907 aaKnown RBP eCLIP16.7■□□□□ 0.26
AP3B1-203ENST00000517940 NUTM2FA1L443 756 aa16.69■□□□□ 0.26
AP3B1-203ENST00000517940 CADPS2Q86UW7 1296 aa16.69■□□□□ 0.26
AP3B1-203ENST00000517940 CDK19Q9BWU1 502 aa16.69■□□□□ 0.26
AP3B1-203ENST00000517940 ITSN1Q15811 1721 aa16.68■□□□□ 0.26
AP3B1-203ENST00000517940 NHSL1Q5SYE7 1610 aa16.68■□□□□ 0.26
AP3B1-203ENST00000517940 ATF3P18847 181 aa16.67■□□□□ 0.26
AP3B1-203ENST00000517940 ORAI2Q96SN7 254 aa16.67■□□□□ 0.26
AP3B1-203ENST00000517940 CABP2Q9NPB3 220 aa16.67■□□□□ 0.26
AP3B1-203ENST00000517940 SLAIN2Q9P270 581 aa16.67■□□□□ 0.26
AP3B1-203ENST00000517940 UBAP1LF5GYI3 381 aa16.66■□□□□ 0.26
AP3B1-203ENST00000517940 BRINP3Q76B58 766 aa16.66■□□□□ 0.26
AP3B1-203ENST00000517940 CD163L1Q9NR16 1453 aa16.65■□□□□ 0.26
AP3B1-203ENST00000517940 KIF1AQ12756 1690 aa16.65■□□□□ 0.26
AP3B1-203ENST00000517940 EVC2Q86UK5 1308 aa16.65■□□□□ 0.26
AP3B1-203ENST00000517940 AHDC1Q5TGY3 1603 aaPredicted RBP16.64■□□□□ 0.25
AP3B1-203ENST00000517940 NUDT16Q96DE0 195 aaKnown RBP16.64■□□□□ 0.25
AP3B1-203ENST00000517940 AKAP12Q02952 1782 aa16.63■□□□□ 0.25
AP3B1-203ENST00000517940 TRPM3Q9HCF6 1732 aaPredicted RBP16.62■□□□□ 0.25
AP3B1-203ENST00000517940 TOM1O60784 492 aa16.62■□□□□ 0.25
AP3B1-203ENST00000517940 DDX17Q92841 729 aaKnown RBP16.62■□□□□ 0.25
AP3B1-203ENST00000517940 COL16A1Q07092 1604 aaPredicted RBP16.62■□□□□ 0.25
AP3B1-203ENST00000517940 PXDNQ92626 1479 aa16.61■□□□□ 0.25
AP3B1-203ENST00000517940 PPIP5K1Q6PFW1 1433 aa16.61■□□□□ 0.25
AP3B1-203ENST00000517940 NRKQ7Z2Y5 1582 aa16.6■□□□□ 0.25
AP3B1-203ENST00000517940 MON2Q7Z3U7 1717 aa16.6■□□□□ 0.25
AP3B1-203ENST00000517940 PIP4K2BP78356 416 aa16.6■□□□□ 0.25
AP3B1-203ENST00000517940 SRPK2P78362 688 aaKnown RBP16.6■□□□□ 0.25
AP3B1-203ENST00000517940 POLR3AO14802 1390 aaPredicted RBP16.6■□□□□ 0.25
AP3B1-203ENST00000517940 TMF1P82094 1093 aa16.59■□□□□ 0.25
AP3B1-203ENST00000517940 PUS7Q96PZ0 661 aaKnown RBP16.59■□□□□ 0.25
AP3B1-203ENST00000517940 KIF7Q2M1P5 1343 aa16.59■□□□□ 0.25
AP3B1-203ENST00000517940 ATAD2Q6PL18 1390 aa16.59■□□□□ 0.25
AP3B1-203ENST00000517940 PLEKHG3A1L390 1219 aa16.58■□□□□ 0.24
AP3B1-203ENST00000517940 ESCO1Q5FWF5 840 aa16.58■□□□□ 0.24
AP3B1-203ENST00000517940 PMFBP1Q8TBY8 1022 aa16.58■□□□□ 0.24
AP3B1-203ENST00000517940 CCDC61Q9Y6R9 512 aa16.58■□□□□ 0.24
AP3B1-203ENST00000517940 WASHC2AQ641Q2 1341 aa16.58■□□□□ 0.24
AP3B1-203ENST00000517940 CPSF1Q10570 1443 aaKnown RBP16.58■□□□□ 0.24
AP3B1-203ENST00000517940 PHLPP1O60346 1717 aa16.58■□□□□ 0.24
AP3B1-203ENST00000517940 CCDC7Q96M83 1385 aa16.57■□□□□ 0.24
AP3B1-203ENST00000517940 CABP1Q9NZU7 370 aa16.57■□□□□ 0.24
AP3B1-203ENST00000517940 PHF8Q9UPP1 1060 aa16.57■□□□□ 0.24
AP3B1-203ENST00000517940 SSH2Q76I76 1423 aa16.56■□□□□ 0.24
AP3B1-203ENST00000517940 FBXO41Q8TF61 875 aa16.56■□□□□ 0.24
AP3B1-203ENST00000517940 SLC12A5Q9H2X9 1139 aa16.56■□□□□ 0.24
AP3B1-203ENST00000517940 ALS2Q96Q42 1657 aa16.56■□□□□ 0.24
AP3B1-203ENST00000517940 MARF1Q9Y4F3 1742 aaKnown RBP16.55■□□□□ 0.24
AP3B1-203ENST00000517940 ACEP12821 1306 aa16.54■□□□□ 0.24
AP3B1-203ENST00000517940 SOS2Q07890 1332 aaPredicted RBP16.54■□□□□ 0.24
AP3B1-203ENST00000517940 FOXO3O43524 673 aa16.54■□□□□ 0.24
AP3B1-203ENST00000517940 A0A1W2PP64 1363 aa16.53■□□□□ 0.24
AP3B1-203ENST00000517940 XPCQ01831 940 aaPredicted RBP16.53■□□□□ 0.24
AP3B1-203ENST00000517940 USP6P35125 1406 aa16.53■□□□□ 0.24
AP3B1-203ENST00000517940 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.24
AP3B1-203ENST00000517940 SLC24A1O60721 1099 aa16.52■□□□□ 0.24
AP3B1-203ENST00000517940 CRYBG1Q9Y4K1 1723 aa16.52■□□□□ 0.24
AP3B1-203ENST00000517940 PIK3C2AO00443 1686 aa16.52■□□□□ 0.23
AP3B1-203ENST00000517940 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
AP3B1-203ENST00000517940 HSPA1LP34931 641 aa16.51■□□□□ 0.23
AP3B1-203ENST00000517940 ANKRD36BQ8N2N9 1353 aa16.5■□□□□ 0.23
AP3B1-203ENST00000517940 NPHP3Q7Z494 1330 aa16.49■□□□□ 0.23
AP3B1-203ENST00000517940 ABCA3Q99758 1704 aa16.49■□□□□ 0.23
AP3B1-203ENST00000517940 CARD14Q9BXL6 1004 aa16.49■□□□□ 0.23
AP3B1-203ENST00000517940 SHPRHQ149N8 1683 aa16.49■□□□□ 0.23
AP3B1-203ENST00000517940 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
AP3B1-203ENST00000517940 CDCA8Q53HL2 280 aa16.48■□□□□ 0.23
AP3B1-203ENST00000517940 TMC1Q8TDI8 760 aa16.48■□□□□ 0.23
AP3B1-203ENST00000517940 USP54Q70EL1 1684 aa16.48■□□□□ 0.23
AP3B1-203ENST00000517940 TNS3Q68CZ2 1445 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms