RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 ADGRB1O14514 1584 aa35.85■■■■□ 3.33
PVT1-204ENST00000517525 TRIM26Q12899 539 aaPredicted RBP35.83■■■■□ 3.33
PVT1-204ENST00000517525 PLEKHH1Q9ULM0 1364 aa35.83■■■■□ 3.33
PVT1-204ENST00000517525 DLC1Q96QB1 1528 aa35.82■■■■□ 3.32
PVT1-204ENST00000517525 NHSL1Q5SYE7 1610 aa35.79■■■■□ 3.32
PVT1-204ENST00000517525 SPATA31A6Q5VVP1 1343 aa35.76■■■■□ 3.31
PVT1-204ENST00000517525 ORAI2Q96SN7 254 aa35.75■■■■□ 3.31
PVT1-204ENST00000517525 PHF23Q9BUL5 403 aaPredicted RBP35.75■■■■□ 3.31
PVT1-204ENST00000517525 LRRC59Q96AG4 307 aaKnown RBP35.73■■■■□ 3.31
PVT1-204ENST00000517525 PRAM1Q96QH2 718 aa35.72■■■■□ 3.31
PVT1-204ENST00000517525 SOS2Q07890 1332 aaPredicted RBP35.7■■■■□ 3.31
PVT1-204ENST00000517525 SHPRHQ149N8 1683 aa35.69■■■■□ 3.3
PVT1-204ENST00000517525 POGKQ9P215 609 aa35.66■■■■□ 3.3
PVT1-204ENST00000517525 RGS17Q9UGC6 210 aaPredicted RBP35.66■■■■□ 3.3
PVT1-204ENST00000517525 TRAK1Q9UPV9 953 aa35.66■■■■□ 3.3
PVT1-204ENST00000517525 ESCO1Q5FWF5 840 aa35.65■■■■□ 3.3
PVT1-204ENST00000517525 DDX17Q92841 729 aaKnown RBP35.65■■■■□ 3.3
PVT1-204ENST00000517525 KIAA1210Q9ULL0 1709 aa35.63■■■■□ 3.29
PVT1-204ENST00000517525 FMN2Q9NZ56 1722 aa35.63■■■■□ 3.29
PVT1-204ENST00000517525 L3MBTL2Q969R5 705 aa35.62■■■■□ 3.29
PVT1-204ENST00000517525 SIN3AQ96ST3 1273 aa35.62■■■■□ 3.29
PVT1-204ENST00000517525 NPHP3Q7Z494 1330 aa35.61■■■■□ 3.29
PVT1-204ENST00000517525 ADGRB2O60241 1585 aa35.59■■■■□ 3.29
PVT1-204ENST00000517525 PNPLA6Q8IY17 1366 aa35.59■■■■□ 3.29
PVT1-204ENST00000517525 LRP6O75581 1613 aa35.58■■■■□ 3.29
PVT1-204ENST00000517525 SAFB2Q14151 953 aaKnown RBP eCLIP35.57■■■■□ 3.28
PVT1-204ENST00000517525 ANKARQ7Z5J8 1434 aa35.55■■■■□ 3.28
PVT1-204ENST00000517525 NUTM2FA1L443 756 aa35.54■■■■□ 3.28
PVT1-204ENST00000517525 PXDNQ92626 1479 aa35.53■■■■□ 3.28
PVT1-204ENST00000517525 FOXO3O43524 673 aa35.52■■■■□ 3.28
PVT1-204ENST00000517525 NBPF1Q3BBV0 1214 aa35.51■■■■□ 3.28
PVT1-204ENST00000517525 NEUROD1Q13562 356 aa35.5■■■■□ 3.27
PVT1-204ENST00000517525 EIF3AQ14152 1382 aaKnown RBP35.5■■■■□ 3.27
PVT1-204ENST00000517525 KIF1AQ12756 1690 aa35.49■■■■□ 3.27
PVT1-204ENST00000517525 PHF8Q9UPP1 1060 aa35.48■■■■□ 3.27
PVT1-204ENST00000517525 ARHGEF28Q8N1W1 1705 aaKnown RBP35.48■■■■□ 3.27
PVT1-204ENST00000517525 WASLO00401 505 aaPredicted RBP35.47■■■■□ 3.27
PVT1-204ENST00000517525 MINK1Q8N4C8 1332 aaPredicted RBP35.47■■■■□ 3.27
PVT1-204ENST00000517525 MEX3CQ5U5Q3 659 aaKnown RBP35.45■■■■□ 3.27
PVT1-204ENST00000517525 POTEAQ6S8J7 498 aa35.44■■■■□ 3.26
PVT1-204ENST00000517525 HIRIP3Q9BW71 556 aaPredicted RBP35.44■■■■□ 3.26
PVT1-204ENST00000517525 NUTM2BA6NNL0 878 aaPredicted RBP35.43■■■■□ 3.26
PVT1-204ENST00000517525 NUTM2EB1AL46 878 aaPredicted RBP35.43■■■■□ 3.26
PVT1-204ENST00000517525 NUTM2AQ8IVF1 878 aaPredicted RBP35.43■■■■□ 3.26
PVT1-204ENST00000517525 TULP4Q9NRJ4 1543 aa35.41■■■■□ 3.26
PVT1-204ENST00000517525 USP32Q8NFA0 1604 aa35.4■■■■□ 3.26
PVT1-204ENST00000517525 COL22A1Q8NFW1 1626 aaPredicted RBP35.4■■■■□ 3.26
PVT1-204ENST00000517525 ZNF772Q68DY9 489 aaPredicted RBP35.4■■■■□ 3.26
PVT1-204ENST00000517525 PRR36Q9H6K5 1346 aa35.38■■■■□ 3.25
PVT1-204ENST00000517525 KRT28Q7Z3Y7 464 aa35.38■■■■□ 3.25
PVT1-204ENST00000517525 SPATA31A3Q5VYP0 1347 aa35.37■■■■□ 3.25
PVT1-204ENST00000517525 XPCQ01831 940 aaPredicted RBP35.37■■■■□ 3.25
PVT1-204ENST00000517525 RGPD8O14715 1765 aaPredicted RBP35.36■■■■□ 3.25
PVT1-204ENST00000517525 PSME1Q06323 249 aa35.36■■■■□ 3.25
PVT1-204ENST00000517525 SBNO1A3KN83 1393 aa35.35■■■■□ 3.25
PVT1-204ENST00000517525 TRPM1Q7Z4N2 1603 aa35.32■■■■□ 3.25
PVT1-204ENST00000517525 CENPJQ9HC77 1338 aaPredicted RBP35.32■■■■□ 3.24
PVT1-204ENST00000517525 CDK19Q9BWU1 502 aa35.3■■■■□ 3.24
PVT1-204ENST00000517525 GPRASP1Q5JY77 1395 aa35.29■■■■□ 3.24
PVT1-204ENST00000517525 PMFBP1Q8TBY8 1022 aa35.29■■■■□ 3.24
PVT1-204ENST00000517525 ATP7BP35670 1465 aa35.29■■■■□ 3.24
PVT1-204ENST00000517525 NBPF8Q3BBV2 869 aa35.28■■■■□ 3.24
PVT1-204ENST00000517525 NUDT16Q96DE0 195 aaKnown RBP35.28■■■■□ 3.24
PVT1-204ENST00000517525 TNS3Q68CZ2 1445 aa35.28■■■■□ 3.24
PVT1-204ENST00000517525 AFF2P51816 1311 aa35.28■■■■□ 3.24
PVT1-204ENST00000517525 TONSLQ96HA7 1378 aa35.27■■■■□ 3.24
PVT1-204ENST00000517525 ROCK2O75116 1388 aaKnown RBP35.26■■■■□ 3.24
PVT1-204ENST00000517525 C8orf37Q96NL8 207 aa35.25■■■■□ 3.23
PVT1-204ENST00000517525 ADAMTS2O95450 1211 aa35.24■■■■□ 3.23
PVT1-204ENST00000517525 CCDC61Q9Y6R9 512 aa35.23■■■■□ 3.23
PVT1-204ENST00000517525 ARHGEF10O15013 1369 aa35.23■■■■□ 3.23
PVT1-204ENST00000517525 FNBP4Q8N3X1 1017 aaPredicted RBP35.22■■■■□ 3.23
PVT1-204ENST00000517525 NGLY1Q96IV0 654 aa35.22■■■■□ 3.23
PVT1-204ENST00000517525 PLEKHG3A1L390 1219 aa35.19■■■■□ 3.22
PVT1-204ENST00000517525 NGDNQ8NEJ9 315 aaKnown RBP35.18■■■■□ 3.22
PVT1-204ENST00000517525 POLR3AO14802 1390 aaPredicted RBP35.17■■■■□ 3.22
PVT1-204ENST00000517525 ITSN1Q15811 1721 aa35.17■■■■□ 3.22
PVT1-204ENST00000517525 RXRBP28702 533 aa35.15■■■■□ 3.22
PVT1-204ENST00000517525 TRPM3Q9HCF6 1732 aaPredicted RBP35.15■■■■□ 3.22
PVT1-204ENST00000517525 CLSPNQ9HAW4 1339 aa35.14■■■■□ 3.22
PVT1-204ENST00000517525 RALGAPBQ86X10 1494 aa35.14■■■■□ 3.22
PVT1-204ENST00000517525 CDK12Q9NYV4 1490 aaPredicted RBP35.13■■■■□ 3.21
PVT1-204ENST00000517525 TOPAZ1Q8N9V7 1692 aa35.12■■■■□ 3.21
PVT1-204ENST00000517525 QRICH2Q9H0J4 1663 aa35.12■■■■□ 3.21
PVT1-204ENST00000517525 QTRT2Q9H974 415 aaKnown RBP35.12■■■■□ 3.21
PVT1-204ENST00000517525 SRPK2P78362 688 aaKnown RBP35.1■■■■□ 3.21
PVT1-204ENST00000517525 USP21Q9UK80 565 aa35.1■■■■□ 3.21
PVT1-204ENST00000517525 EVC2Q86UK5 1308 aa35.08■■■■□ 3.21
PVT1-204ENST00000517525 RBM6P78332 1123 aaKnown RBP35.08■■■■□ 3.21
PVT1-204ENST00000517525 CARD11Q9BXL7 1154 aa35.08■■■■□ 3.21
PVT1-204ENST00000517525 SBNO2Q9Y2G9 1366 aa35.08■■■■□ 3.21
PVT1-204ENST00000517525 ACEP12821 1306 aa35.07■■■■□ 3.21
PVT1-204ENST00000517525 MARF1Q9Y4F3 1742 aaKnown RBP35.07■■■■□ 3.2
PVT1-204ENST00000517525 CABP2Q9NPB3 220 aa35.07■■■■□ 3.2
PVT1-204ENST00000517525 ALS2Q96Q42 1657 aa35.07■■■■□ 3.2
PVT1-204ENST00000517525 LMOD2Q6P5Q4 547 aa35.06■■■■□ 3.2
PVT1-204ENST00000517525 PCGF6Q9BYE7 350 aa35.06■■■■□ 3.2
PVT1-204ENST00000517525 TRPC5Q9UL62 973 aaPredicted RBP35.06■■■■□ 3.2
PVT1-204ENST00000517525 BCL9LQ86UU0 1499 aa35.05■■■■□ 3.2
PVT1-204ENST00000517525 TIMELESSQ9UNS1 1208 aa35.05■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms