RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 KIF3BO15066 747 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 HSP90AB1P08238 724 aaKnown RBP2.58□□□□□ -2
RNU1-40P-201ENST00000516816 U2AF1L5P0DN76 240 aaPredicted RBP2.58□□□□□ -2
RNU1-40P-201ENST00000516816 CDK11BP21127 795 aaKnown RBP2.58□□□□□ -2
RNU1-40P-201ENST00000516816 MRE11P49959 708 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 U2AF1Q01081 240 aaKnown RBP eCLIP2.58□□□□□ -2
RNU1-40P-201ENST00000516816 LMOD3Q0VAK6 560 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 CCDC27Q2M243 656 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 NBPF1Q3BBV0 1214 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 DUSP27Q5VZP5 1158 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 DZIP1LQ8IYY4 767 aaKnown RBP2.58□□□□□ -2
RNU1-40P-201ENST00000516816 HS6ST3Q8IZP7 471 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 GCC1Q96CN9 775 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 HDAC5Q9UQL6 1122 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 BCORL1Q5H9F3 1711 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 MYO5CQ9NQX4 1742 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 KIF16BQ96L93 1317 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 NUP153P49790 1475 aaKnown RBP2.58□□□□□ -2
RNU1-40P-201ENST00000516816 ARHGAP5Q13017 1502 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 MAGI3Q5TCQ9 1506 aa2.58□□□□□ -2
RNU1-40P-201ENST00000516816 KDM6BO15054 1643 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 KDM5AP29375 1690 aaKnown RBP2.57□□□□□ -2
RNU1-40P-201ENST00000516816 RIOK3O14730 519 aaKnown RBP2.57□□□□□ -2
RNU1-40P-201ENST00000516816 PDIA4P13667 645 aaKnown RBP2.57□□□□□ -2
RNU1-40P-201ENST00000516816 MCCP23508 829 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 MSNP26038 577 aaKnown RBP2.57□□□□□ -2
RNU1-40P-201ENST00000516816 TNNT2P45379 298 aaPredicted RBP2.57□□□□□ -2
RNU1-40P-201ENST00000516816 SRPK2P78362 688 aaKnown RBP2.57□□□□□ -2
RNU1-40P-201ENST00000516816 NUCB2P80303 420 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 ALDH1L2Q3SY69 923 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 WWC1Q8IX03 1113 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 CCDC146Q8IYE0 955 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 TRMT2AQ8IZ69 625 aaKnown RBP2.57□□□□□ -2
RNU1-40P-201ENST00000516816 TCP11L2Q8N4U5 519 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 SYAP1Q96A49 352 aaPredicted RBP2.57□□□□□ -2
RNU1-40P-201ENST00000516816 SGIP1Q9BQI5 828 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 C22orf23Q9BZE7 217 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 ESF1Q9H501 851 aaKnown RBP2.57□□□□□ -2
RNU1-40P-201ENST00000516816 CWC22Q9HCG8 908 aaKnown RBP2.57□□□□□ -2
RNU1-40P-201ENST00000516816 SPINK5Q9NQ38 1064 aaPredicted RBP2.57□□□□□ -2
RNU1-40P-201ENST00000516816 POGKQ9P215 609 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 ZMYM3Q14202 1370 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 GPRASP1Q5JY77 1395 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 RTEL1-TNFRSF6BF6WH68 1400 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 PRAG1Q86YV5 1406 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 ATP10BO94823 1461 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 ASXL1Q8IXJ9 1541 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 DISP1Q96F81 1524 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 KDM5DQ9BY66 1539 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 FAM135AQ9P2D6 1515 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 TRPM1Q7Z4N2 1603 aa2.57□□□□□ -2
RNU1-40P-201ENST00000516816 KIAA1210Q9ULL0 1709 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 CDC42BPBQ9Y5S2 1711 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 SENP3-EIF4A1A0A087X0R7 540 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 U2SURPO15042 1029 aaKnown RBP2.56□□□□□ -2
RNU1-40P-201ENST00000516816 ST18O60284 1047 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 TRAK2O60296 914 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 DIAPH1O60610 1272 aaKnown RBP2.56□□□□□ -2
RNU1-40P-201ENST00000516816 HMMRO75330 724 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 FRAT2O75474 233 aaPredicted RBP2.56□□□□□ -2
RNU1-40P-201ENST00000516816 BCAR3O75815 825 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 FCHSD2O94868 740 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 LETM1O95202 739 aaPredicted RBP2.56□□□□□ -2
RNU1-40P-201ENST00000516816 MTHFSP49914 203 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 RIPK4P57078 832 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 GNAI1P63096 354 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 CACNB1Q02641 598 aaPredicted RBP2.56□□□□□ -2
RNU1-40P-201ENST00000516816 MKRN4PQ13434 485 aaPredicted RBP2.56□□□□□ -2
RNU1-40P-201ENST00000516816 MVPQ14764 893 aaKnown RBP2.56□□□□□ -2
RNU1-40P-201ENST00000516816 CSPP1Q1MSJ5 1256 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 MTERF4Q7Z6M4 381 aaKnown RBP2.56□□□□□ -2
RNU1-40P-201ENST00000516816 ITPRIPQ8IWB1 547 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 ARHGAP45Q92619 1136 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 AKT1S1Q96B36 256 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 CHMP4CQ96CF2 233 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 TESK2Q96S53 571 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 API5Q9BZZ5 524 aaKnown RBP2.56□□□□□ -2
RNU1-40P-201ENST00000516816 SMC4Q9NTJ3 1288 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 SLC52A1Q9NWF4 448 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 COG6Q9Y2V7 657 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 IL16Q14005 1332 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 POLR3AO14802 1390 aaPredicted RBP2.56□□□□□ -2
RNU1-40P-201ENST00000516816 PIK3C2GO75747 1445 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 PLB1Q6P1J6 1458 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 SCAF11Q99590 1463 aaKnown RBP2.56□□□□□ -2
RNU1-40P-201ENST00000516816 KDM5BQ9UGL1 1544 aa2.56□□□□□ -2
RNU1-40P-201ENST00000516816 EIF4G3O43432 1585 aaKnown RBP2.55□□□□□ -2
RNU1-40P-201ENST00000516816 ATP10AO60312 1499 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 PLCH2O75038 1416 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 PHF14O94880 888 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 CEP152O94986 1710 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 REC8O95072 547 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 NSD2O96028 1365 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 PRR29P0C7W0 189 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 HSP90B1P14625 803 aaKnown RBP2.55□□□□□ -2
RNU1-40P-201ENST00000516816 MCM4P33991 863 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 SLC4A3P48751 1232 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 MCM2P49736 904 aa2.55□□□□□ -2
RNU1-40P-201ENST00000516816 BLMP54132 1417 aaPredicted RBP2.55□□□□□ -2
RNU1-40P-201ENST00000516816 RARSP54136 660 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms