RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 MARVELD3Q96A59 401 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 LYSTQ99698 3801 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FHDC1Q9C0D6 1143 aaPredicted RBP-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 TNMDQ9H2S6 317 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 NTN4Q9HB63 628 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 WFDC1Q9HC57 220 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZFP64Q9NPA5 681 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZNF358Q9NW07 568 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 DLL3Q9NYJ7 618 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SRP68Q9UHB9 627 aaKnown RBP-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 RNF114Q9Y508 228 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 WDR87Q6ZQQ6 2873 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 APCP25054 2843 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 OTOGQ6ZRI0 2925 aa-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 PRRC2CQ9Y520 2896 aaKnown RBP-0.27□□□□□ -2.45
SCARNA20.2-201ENST00000516052 COL17A1Q9UMD9 1497 aaPredicted RBP-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 USP9YO00507 2555 aaPredicted RBP-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 C17orf51A8MQB3 221 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 NRG2O14511 850 aaPredicted RBP-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 GFRA3O60609 400 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 C8AP07357 584 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FUSP35637 526 aaKnown RBP eCLIP-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 RAP1GAPP47736 663 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 KRTAP12-4P60329 112 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 NFKB2Q00653 900 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 XKR4Q5GH76 650 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ARTNQ5T4W7 220 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZNF598Q86UK7 904 aaKnown RBP-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 ZNF575Q86XF7 245 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 COL23A1Q86Y22 540 aaPredicted RBP-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 SCUBE1Q8IWY4 988 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 PIP4P2Q8N4L2 257 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 GALNT6Q8NCL4 622 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 NELL1Q92832 810 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 LCE3DQ9BYE3 92 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 NKX2-4Q9H2Z4 354 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 DHX33Q9H6R0 707 aaKnown RBP-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 DLL4Q9NR61 685 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 GAR1Q9NY12 217 aaKnown RBP-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 KLF15Q9UIH9 416 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 AMMECR1Q9Y4X0 333 aaPredicted RBP-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 PRRC2BQ5JSZ5 2229 aaKnown RBP-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 GPR179Q6PRD1 2367 aa-0.28□□□□□ -2.45
SCARNA20.2-201ENST00000516052 FAT2Q9NYQ8 4349 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FLNAP21333 2647 aaKnown RBP-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HELZ2Q9BYK8 2649 aaKnown RBP-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 NBPF19A0A087WUL8 3843 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 LPAP08519 4548 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CUL9Q8IWT3 2517 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 A0A0G2JS52 829 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PROB1E7EW31 1015 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 RNF225M0QZC1 329 aaPredicted RBP-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 NTN3O00634 580 aaPredicted RBP-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 LILRB3O75022 631 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PRG2P13727 222 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TNFRSF1BP20333 461 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 FBLP22087 321 aaKnown RBP-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 BAG6P46379 1132 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 VASPP50552 380 aaPredicted RBP-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 XGP55808 180 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KRTAP12-2P59991 146 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CKAP4Q07065 602 aaKnown RBP-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SEMA3FQ13275 785 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TRA2AQ13595 282 aaKnown RBP eCLIP-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 PLA2G4EQ3MJ16 856 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 LCE3CQ5T5A8 94 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CDCP2Q5VXM1 449 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 OAFQ86UD1 273 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ZDHHC13Q8IUH4 622 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 WBP1Q96G27 269 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MAML3Q96JK9 1138 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SPAG8Q99932 426 aaPredicted RBP-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CHRDL1Q9BU40 450 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 RNF39Q9H2S5 420 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SCRT2Q9NQ03 307 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ADGRE2Q9UHX3 823 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TNRC18O15417 2968 aaPredicted RBP-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HECTD1Q9ULT8 2610 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 BRWD3Q6RI45 1802 aa-0.29□□□□□ -2.46
SCARNA20.2-201ENST00000516052 TPRP12270 2363 aaKnown RBP-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CACNA1EQ15878 2313 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 MAP1AP78559 2803 aaPredicted RBP-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CACNA1AO00555 2505 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 IGF2RP11717 2491 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CUBNO60494 3623 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 A0A1B0GVY2 172 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 WASLO00401 505 aaPredicted RBP-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SOX1O00570 391 aaPredicted RBP-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CBFA2T3O75081 653 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 SLITRK3O94933 977 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 ARP10275 920 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HOXD8P13378 290 aaPredicted RBP-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CFPP27918 469 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 CTGFP29279 349 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 GMPRP36959 345 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 IL12RB1P42701 662 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KIR3DL1P43629 444 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 HMGA2P52926 109 aa-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 EWSR1Q01844 656 aaKnown RBP eCLIP-0.3□□□□□ -2.46
SCARNA20.2-201ENST00000516052 KIR3DS1Q14943 382 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms