RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CCDC146Q8IYE0 955 aa16.03■□□□□ 0.16
SMAD1-215ENST00000515385 PRG4Q92954 1404 aaPredicted RBP16.02■□□□□ 0.16
SMAD1-215ENST00000515385 FAM135AQ9P2D6 1515 aa16.02■□□□□ 0.15
SMAD1-215ENST00000515385 KIAA0556O60303 1618 aa16.02■□□□□ 0.15
SMAD1-215ENST00000515385 ARHGAP31Q2M1Z3 1444 aa16.02■□□□□ 0.15
SMAD1-215ENST00000515385 SYNJ2O15056 1496 aa16.01■□□□□ 0.15
SMAD1-215ENST00000515385 TSPY4P0CV99 314 aa16.01■□□□□ 0.15
SMAD1-215ENST00000515385 TSPY10P0CW01 314 aa16.01■□□□□ 0.15
SMAD1-215ENST00000515385 RARSP54136 660 aaKnown RBP16.01■□□□□ 0.15
SMAD1-215ENST00000515385 KLHL40Q2TBA0 621 aa16.01■□□□□ 0.15
SMAD1-215ENST00000515385 ZNF777Q9ULD5 760 aaPredicted RBP16.01■□□□□ 0.15
SMAD1-215ENST00000515385 R3HCC1Q9Y3T6 440 aaKnown RBP16.01■□□□□ 0.15
SMAD1-215ENST00000515385 HSP90AB1P08238 724 aaKnown RBP16.01■□□□□ 0.15
SMAD1-215ENST00000515385 ZNF445P59923 1031 aa16■□□□□ 0.15
SMAD1-215ENST00000515385 RSPH4AQ5TD94 716 aa16■□□□□ 0.15
SMAD1-215ENST00000515385 RNF17Q9BXT8 1623 aaKnown RBP16■□□□□ 0.15
SMAD1-215ENST00000515385 UQCRHLA0A096LP55 91 aa15.99■□□□□ 0.15
SMAD1-215ENST00000515385 UQCRHP07919 91 aa15.99■□□□□ 0.15
SMAD1-215ENST00000515385 NAP1L2Q9ULW6 460 aaPredicted RBP15.99■□□□□ 0.15
SMAD1-215ENST00000515385 WWC1Q8IX03 1113 aa15.99■□□□□ 0.15
SMAD1-215ENST00000515385 ADAMTS12P58397 1594 aa15.99■□□□□ 0.15
SMAD1-215ENST00000515385 IPO4Q8TEX9 1081 aaKnown RBP15.98■□□□□ 0.15
SMAD1-215ENST00000515385 BBXQ8WY36 941 aaPredicted RBP15.98■□□□□ 0.15
SMAD1-215ENST00000515385 CDC42BPAQ5VT25 1732 aa15.97■□□□□ 0.15
SMAD1-215ENST00000515385 DISP1Q96F81 1524 aa15.97■□□□□ 0.15
SMAD1-215ENST00000515385 HDAC1Q13547 482 aaPredicted RBP15.97■□□□□ 0.15
SMAD1-215ENST00000515385 SASS6Q6UVJ0 657 aa15.97■□□□□ 0.15
SMAD1-215ENST00000515385 PDLIM2Q96JY6 352 aa15.97■□□□□ 0.15
SMAD1-215ENST00000515385 GRIN2AQ12879 1464 aa15.97■□□□□ 0.15
SMAD1-215ENST00000515385 DMTNQ08495 405 aa15.96■□□□□ 0.15
SMAD1-215ENST00000515385 PBRM1Q86U86 1689 aa15.96■□□□□ 0.15
SMAD1-215ENST00000515385 SHROOM2Q13796 1616 aa15.96■□□□□ 0.15
SMAD1-215ENST00000515385 MVPQ14764 893 aaKnown RBP15.96■□□□□ 0.15
SMAD1-215ENST00000515385 NCBP3Q53F19 620 aaKnown RBP15.96■□□□□ 0.15
SMAD1-215ENST00000515385 WDR63Q8IWG1 891 aa15.96■□□□□ 0.15
SMAD1-215ENST00000515385 ARHGEF5Q12774 1597 aa15.96■□□□□ 0.15
SMAD1-215ENST00000515385 KANK1Q14678 1352 aa15.95■□□□□ 0.14
SMAD1-215ENST00000515385 TNNT2P45379 298 aaPredicted RBP15.95■□□□□ 0.14
SMAD1-215ENST00000515385 RGL3Q3MIN7 710 aa15.95■□□□□ 0.14
SMAD1-215ENST00000515385 CCDC94Q9BW85 323 aaPredicted RBP15.95■□□□□ 0.14
SMAD1-215ENST00000515385 DMRT2Q9Y5R5 561 aa15.95■□□□□ 0.14
SMAD1-215ENST00000515385 TARBP1Q13395 1621 aaKnown RBP15.95■□□□□ 0.14
SMAD1-215ENST00000515385 GTF2E1P29083 439 aaPredicted RBP15.95■□□□□ 0.14
SMAD1-215ENST00000515385 ZKSCAN5Q9Y2L8 839 aa15.95■□□□□ 0.14
SMAD1-215ENST00000515385 DDX49Q9Y6V7 483 aaKnown RBP15.94■□□□□ 0.14
SMAD1-215ENST00000515385 RLBP1P12271 317 aa15.93■□□□□ 0.14
SMAD1-215ENST00000515385 POLR3AO14802 1390 aaPredicted RBP15.93■□□□□ 0.14
SMAD1-215ENST00000515385 ATP10AO60312 1499 aa15.93■□□□□ 0.14
SMAD1-215ENST00000515385 PLA2R1Q13018 1463 aa15.93■□□□□ 0.14
SMAD1-215ENST00000515385 CT47B1P0C2W7 299 aaPredicted RBP15.92■□□□□ 0.14
SMAD1-215ENST00000515385 GTPBP4Q9BZE4 634 aaKnown RBP15.92■□□□□ 0.14
SMAD1-215ENST00000515385 CCDC39Q9UFE4 941 aa15.92■□□□□ 0.14
SMAD1-215ENST00000515385 MYO5CQ9NQX4 1742 aa15.92■□□□□ 0.14
SMAD1-215ENST00000515385 K7ELQ4 463 aaPredicted RBP15.91■□□□□ 0.14
SMAD1-215ENST00000515385 STAC3Q96MF2 364 aa15.91■□□□□ 0.14
SMAD1-215ENST00000515385 PHF23Q9BUL5 403 aaPredicted RBP15.91■□□□□ 0.14
SMAD1-215ENST00000515385 IQGAP1P46940 1657 aa15.91■□□□□ 0.14
SMAD1-215ENST00000515385 KIF16BQ96L93 1317 aa15.91■□□□□ 0.14
SMAD1-215ENST00000515385 CCDC27Q2M243 656 aa15.9■□□□□ 0.14
SMAD1-215ENST00000515385 ZKSCAN2Q63HK3 967 aa15.9■□□□□ 0.14
SMAD1-215ENST00000515385 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.9■□□□□ 0.14
SMAD1-215ENST00000515385 KIF20AO95235 890 aa15.9■□□□□ 0.14
SMAD1-215ENST00000515385 BAG4O95429 457 aaKnown RBP15.9■□□□□ 0.14
SMAD1-215ENST00000515385 UNC13BO14795 1591 aa15.89■□□□□ 0.13
SMAD1-215ENST00000515385 DZIP1LQ8IYY4 767 aaKnown RBP15.89■□□□□ 0.13
SMAD1-215ENST00000515385 KLHL34Q8N239 644 aa15.89■□□□□ 0.13
SMAD1-215ENST00000515385 RUNDC1Q96C34 613 aa15.89■□□□□ 0.13
SMAD1-215ENST00000515385 XPCQ01831 940 aaPredicted RBP15.88■□□□□ 0.13
SMAD1-215ENST00000515385 SCAF11Q99590 1463 aaKnown RBP15.88■□□□□ 0.13
SMAD1-215ENST00000515385 NUCB2P80303 420 aa15.88■□□□□ 0.13
SMAD1-215ENST00000515385 FTSJ3Q8IY81 847 aaKnown RBP15.88■□□□□ 0.13
SMAD1-215ENST00000515385 DDX19BQ9UMR2 479 aa15.87■□□□□ 0.13
SMAD1-215ENST00000515385 ZSCAN23Q3MJ62 389 aa15.87■□□□□ 0.13
SMAD1-215ENST00000515385 MYOM1P52179 1685 aa15.86■□□□□ 0.13
SMAD1-215ENST00000515385 ZSCAN20P17040 1043 aaPredicted RBP15.86■□□□□ 0.13
SMAD1-215ENST00000515385 SSFA2P28290 1259 aa15.86■□□□□ 0.13
SMAD1-215ENST00000515385 PDS5BQ9NTI5 1447 aa15.86■□□□□ 0.13
SMAD1-215ENST00000515385 IQSEC2Q5JU85 1478 aa15.85■□□□□ 0.13
SMAD1-215ENST00000515385 LETM1O95202 739 aaPredicted RBP15.85■□□□□ 0.13
SMAD1-215ENST00000515385 HMGN5P82970 282 aaKnown RBP15.85■□□□□ 0.13
SMAD1-215ENST00000515385 BMP2KLQ5H9B9 411 aa15.85■□□□□ 0.13
SMAD1-215ENST00000515385 MYRIPQ8NFW9 859 aa15.85■□□□□ 0.13
SMAD1-215ENST00000515385 PRIMPOLQ96LW4 560 aa15.85■□□□□ 0.13
SMAD1-215ENST00000515385 KIF2CQ99661 725 aa15.84■□□□□ 0.13
SMAD1-215ENST00000515385 RBSNQ9H1K0 784 aa15.84■□□□□ 0.13
SMAD1-215ENST00000515385 TNNQ9UQP3 1299 aa15.84■□□□□ 0.13
SMAD1-215ENST00000515385 NUCB1Q02818 461 aa15.83■□□□□ 0.13
SMAD1-215ENST00000515385 ZHX1Q9UKY1 873 aaPredicted RBP15.83■□□□□ 0.13
SMAD1-215ENST00000515385 IQGAP3Q86VI3 1631 aa15.83■□□□□ 0.13
SMAD1-215ENST00000515385 CFAP44Q96MT7 982 aa15.83■□□□□ 0.12
SMAD1-215ENST00000515385 KDM5AP29375 1690 aaKnown RBP15.83■□□□□ 0.12
SMAD1-215ENST00000515385 PLEKHD1A6NEE1 506 aa15.82■□□□□ 0.12
SMAD1-215ENST00000515385 TAF3Q5VWG9 929 aa15.82■□□□□ 0.12
SMAD1-215ENST00000515385 CAVIN1Q6NZI2 390 aaKnown RBP15.82■□□□□ 0.12
SMAD1-215ENST00000515385 LMBRD1Q9NUN5 540 aa15.82■□□□□ 0.12
SMAD1-215ENST00000515385 MADDQ8WXG6 1647 aa15.81■□□□□ 0.12
SMAD1-215ENST00000515385 GTF2F1P35269 517 aaKnown RBP eCLIP15.81■□□□□ 0.12
SMAD1-215ENST00000515385 KIAA2012Q0VF49 1180 aa15.81■□□□□ 0.12
SMAD1-215ENST00000515385 TCP11L2Q8N4U5 519 aa15.81■□□□□ 0.12
SMAD1-215ENST00000515385 CWC22Q9HCG8 908 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms