RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 USB1Q9BQ65 265 aaKnown RBP10.67□□□□□ -0.7
PHF3-211ENST00000514822 PCDHGC3Q9UN70 934 aa10.67□□□□□ -0.7
PHF3-211ENST00000514822 ANKLE1Q8NAG6 615 aa10.66□□□□□ -0.7
PHF3-211ENST00000514822 RSPH6AQ9H0K4 717 aa10.66□□□□□ -0.7
PHF3-211ENST00000514822 C6orf229H3BNL8 230 aa10.65□□□□□ -0.7
PHF3-211ENST00000514822 PPEF1O14829 653 aaPredicted RBP10.65□□□□□ -0.7
PHF3-211ENST00000514822 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.7
PHF3-211ENST00000514822 MYSM1Q5VVJ2 828 aa10.65□□□□□ -0.7
PHF3-211ENST00000514822 RIC3Q7Z5B4 369 aa10.65□□□□□ -0.7
PHF3-211ENST00000514822 FAM117AQ9C073 453 aa10.65□□□□□ -0.7
PHF3-211ENST00000514822 SPTLC1O15269 473 aa10.64□□□□□ -0.71
PHF3-211ENST00000514822 RETREG3Q86VR2 466 aa10.64□□□□□ -0.71
PHF3-211ENST00000514822 SYMPKQ92797 1274 aaKnown RBP10.64□□□□□ -0.71
PHF3-211ENST00000514822 PRDM9Q9NQV7 894 aa10.64□□□□□ -0.71
PHF3-211ENST00000514822 BRPF1P55201 1214 aaPredicted RBP10.62□□□□□ -0.71
PHF3-211ENST00000514822 MTMR2Q13614 643 aa10.62□□□□□ -0.71
PHF3-211ENST00000514822 PRKD2Q9BZL6 878 aa10.62□□□□□ -0.71
PHF3-211ENST00000514822 SPDYE5A6NIY4 337 aa10.61□□□□□ -0.71
PHF3-211ENST00000514822 MMP16P51512 607 aa10.61□□□□□ -0.71
PHF3-211ENST00000514822 V9GY48 417 aaPredicted RBP10.61□□□□□ -0.71
PHF3-211ENST00000514822 CLK2P49760 499 aaKnown RBP10.6□□□□□ -0.71
PHF3-211ENST00000514822 ZBTB3Q9H5J0 574 aa10.6□□□□□ -0.71
PHF3-211ENST00000514822 LIMD1Q9UGP4 676 aa10.6□□□□□ -0.71
PHF3-211ENST00000514822 FCF1Q9Y324 198 aaKnown RBP10.6□□□□□ -0.71
PHF3-211ENST00000514822 PCDHB15Q9Y5E8 787 aa10.6□□□□□ -0.71
PHF3-211ENST00000514822 TUSC1Q2TAM9 212 aa10.59□□□□□ -0.71
PHF3-211ENST00000514822 PRPF38BQ5VTL8 546 aaKnown RBP10.59□□□□□ -0.71
PHF3-211ENST00000514822 PLEKHG3A1L390 1219 aa10.58□□□□□ -0.72
PHF3-211ENST00000514822 DXOO77932 396 aaKnown RBP10.58□□□□□ -0.72
PHF3-211ENST00000514822 JUNDP17535 347 aa10.58□□□□□ -0.72
PHF3-211ENST00000514822 CSPP1Q1MSJ5 1256 aa10.58□□□□□ -0.72
PHF3-211ENST00000514822 SH3D19Q5HYK7 790 aa10.58□□□□□ -0.72
PHF3-211ENST00000514822 HRCP23327 699 aa10.57□□□□□ -0.72
PHF3-211ENST00000514822 SLC19A1P41440 591 aa10.57□□□□□ -0.72
PHF3-211ENST00000514822 POLR3EQ9NVU0 708 aa10.57□□□□□ -0.72
PHF3-211ENST00000514822 SKIV2LQ15477 1246 aaKnown RBP10.56□□□□□ -0.72
PHF3-211ENST00000514822 PLA2G2CQ5R387 149 aa10.56□□□□□ -0.72
PHF3-211ENST00000514822 PRR7Q8TB68 274 aa10.56□□□□□ -0.72
PHF3-211ENST00000514822 NUTM2BA6NNL0 878 aaPredicted RBP10.54□□□□□ -0.72
PHF3-211ENST00000514822 NUTM2EB1AL46 878 aaPredicted RBP10.54□□□□□ -0.72
PHF3-211ENST00000514822 NUTM2DQ5VT03 806 aaPredicted RBP10.54□□□□□ -0.72
PHF3-211ENST00000514822 NUTM2AQ8IVF1 878 aaPredicted RBP10.54□□□□□ -0.72
PHF3-211ENST00000514822 CABLES1Q8TDN4 633 aa10.54□□□□□ -0.72
PHF3-211ENST00000514822 ATP1B4Q9UN42 357 aaPredicted RBP10.54□□□□□ -0.72
PHF3-211ENST00000514822 ZBTB24O43167 697 aaPredicted RBP10.53□□□□□ -0.72
PHF3-211ENST00000514822 LILRB3O75022 631 aa10.53□□□□□ -0.72
PHF3-211ENST00000514822 DESI1Q6ICB0 168 aa10.53□□□□□ -0.72
PHF3-211ENST00000514822 LIAT1Q6ZQX7 453 aa10.53□□□□□ -0.72
PHF3-211ENST00000514822 IL27Q8NEV9 243 aa10.53□□□□□ -0.72
PHF3-211ENST00000514822 EMID1Q96A84 441 aaPredicted RBP10.53□□□□□ -0.72
PHF3-211ENST00000514822 RPIAP49247 311 aa10.52□□□□□ -0.73
PHF3-211ENST00000514822 QPCTQ16769 361 aa10.52□□□□□ -0.73
PHF3-211ENST00000514822 CCDC24Q8N4L8 307 aa10.52□□□□□ -0.73
PHF3-211ENST00000514822 SPRYD7Q5W111 196 aa10.51□□□□□ -0.73
PHF3-211ENST00000514822 NUDT12Q9BQG2 462 aa10.51□□□□□ -0.73
PHF3-211ENST00000514822 CFAP99D6REC4 459 aa10.5□□□□□ -0.73
PHF3-211ENST00000514822 PTPRNQ16849 979 aa10.5□□□□□ -0.73
PHF3-211ENST00000514822 ZNF598Q86UK7 904 aaKnown RBP10.49□□□□□ -0.73
PHF3-211ENST00000514822 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.49□□□□□ -0.73
PHF3-211ENST00000514822 IRX2Q9BZI1 471 aaPredicted RBP10.49□□□□□ -0.73
PHF3-211ENST00000514822 GOPCQ9HD26 462 aa10.49□□□□□ -0.73
PHF3-211ENST00000514822 CD2BP2O95400 341 aaKnown RBP10.48□□□□□ -0.73
PHF3-211ENST00000514822 CCNYL3P0C7X3 344 aa10.48□□□□□ -0.73
PHF3-211ENST00000514822 TSC1Q92574 1164 aa10.48□□□□□ -0.73
PHF3-211ENST00000514822 RTL5Q5HYW3 569 aaPredicted RBP10.47□□□□□ -0.73
PHF3-211ENST00000514822 ZNF697Q5TEC3 545 aa10.47□□□□□ -0.73
PHF3-211ENST00000514822 PROCA1Q8NCQ7 364 aaPredicted RBP10.47□□□□□ -0.73
PHF3-211ENST00000514822 HELBQ8NG08 1087 aaPredicted RBP10.47□□□□□ -0.73
PHF3-211ENST00000514822 PCMTD1Q96MG8 357 aaPredicted RBP10.47□□□□□ -0.73
PHF3-211ENST00000514822 LYPD8Q6UX82 237 aa10.46□□□□□ -0.73
PHF3-211ENST00000514822 TRIM32Q13049 653 aa10.44□□□□□ -0.74
PHF3-211ENST00000514822 PPP2R2DQ66LE6 453 aa10.44□□□□□ -0.74
PHF3-211ENST00000514822 EVA1BQ9NVM1 165 aa10.44□□□□□ -0.74
PHF3-211ENST00000514822 KCNH2Q12809 1159 aa10.42□□□□□ -0.74
PHF3-211ENST00000514822 GFRA3O60609 400 aa10.41□□□□□ -0.74
PHF3-211ENST00000514822 CTHP32929 405 aa10.41□□□□□ -0.74
PHF3-211ENST00000514822 LAPTM4AQ15012 233 aa10.41□□□□□ -0.74
PHF3-211ENST00000514822 PTCRAQ6ISU1 281 aaPredicted RBP10.41□□□□□ -0.74
PHF3-211ENST00000514822 PDZRN3Q9UPQ7 1066 aa10.41□□□□□ -0.74
PHF3-211ENST00000514822 PER1O15534 1290 aaPredicted RBP10.4□□□□□ -0.74
PHF3-211ENST00000514822 UNC93B1Q9H1C4 597 aa10.4□□□□□ -0.74
PHF3-211ENST00000514822 FBXO31Q5XUX0 539 aaPredicted RBP10.39□□□□□ -0.75
PHF3-211ENST00000514822 GDF9O60383 454 aa10.38□□□□□ -0.75
PHF3-211ENST00000514822 F12P00748 615 aaPredicted RBP10.38□□□□□ -0.75
PHF3-211ENST00000514822 PRR20EP86478 221 aa10.38□□□□□ -0.75
PHF3-211ENST00000514822 PRR20CP86479 221 aa10.38□□□□□ -0.75
PHF3-211ENST00000514822 PRR20DP86480 221 aa10.38□□□□□ -0.75
PHF3-211ENST00000514822 PRR20BP86481 221 aa10.38□□□□□ -0.75
PHF3-211ENST00000514822 PRR20AP86496 221 aa10.38□□□□□ -0.75
PHF3-211ENST00000514822 TRIM67Q6ZTA4 783 aa10.38□□□□□ -0.75
PHF3-211ENST00000514822 NRG2O14511 850 aaPredicted RBP10.37□□□□□ -0.75
PHF3-211ENST00000514822 RFC5P40937 340 aa10.37□□□□□ -0.75
PHF3-211ENST00000514822 WNT7BP56706 349 aa10.37□□□□□ -0.75
PHF3-211ENST00000514822 CTDSPL2Q05D32 466 aa10.37□□□□□ -0.75
PHF3-211ENST00000514822 FOXC1Q12948 553 aa10.37□□□□□ -0.75
PHF3-211ENST00000514822 TNFRSF10AO00220 468 aa10.36□□□□□ -0.75
PHF3-211ENST00000514822 MAP10Q9P2G4 905 aa10.36□□□□□ -0.75
PHF3-211ENST00000514822 AP1G2O75843 785 aa10.35□□□□□ -0.75
PHF3-211ENST00000514822 PKD2L1Q9P0L9 805 aa10.35□□□□□ -0.75
PHF3-211ENST00000514822 WNT7AO00755 349 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms