RNA–Protein interactions for RNA: ENST00000514694.5

MATR3-239, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-239ENST00000514694 DCCP43146 1447 aa22.09■■□□□ 1.13
MATR3-239ENST00000514694 SCAF1Q9H7N4 1312 aaKnown RBP22.08■■□□□ 1.13
MATR3-239ENST00000514694 ATF3P18847 181 aa22.08■■□□□ 1.13
MATR3-239ENST00000514694 ROCK2O75116 1388 aaKnown RBP22.08■■□□□ 1.12
MATR3-239ENST00000514694 CADPS2Q86UW7 1296 aa22.07■■□□□ 1.12
MATR3-239ENST00000514694 SLAIN2Q9P270 581 aa22.07■■□□□ 1.12
MATR3-239ENST00000514694 RALGAPBQ86X10 1494 aa22.07■■□□□ 1.12
MATR3-239ENST00000514694 ARHGEF28Q8N1W1 1705 aaKnown RBP22.06■■□□□ 1.12
MATR3-239ENST00000514694 POGKQ9P215 609 aa22.06■■□□□ 1.12
MATR3-239ENST00000514694 TIMELESSQ9UNS1 1208 aa22.06■■□□□ 1.12
MATR3-239ENST00000514694 GPRASP1Q5JY77 1395 aa22.06■■□□□ 1.12
MATR3-239ENST00000514694 MST1RQ04912 1400 aa22.06■■□□□ 1.12
MATR3-239ENST00000514694 CDC42BPGQ6DT37 1551 aa22.04■■□□□ 1.12
MATR3-239ENST00000514694 HIRIP3Q9BW71 556 aaPredicted RBP22.02■■□□□ 1.12
MATR3-239ENST00000514694 MINK1Q8N4C8 1332 aaPredicted RBP22.01■■□□□ 1.11
MATR3-239ENST00000514694 ROBO1Q9Y6N7 1651 aa22■■□□□ 1.11
MATR3-239ENST00000514694 C1orf167Q5SNV9 1468 aa21.99■■□□□ 1.11
MATR3-239ENST00000514694 HSPA1LP34931 641 aa21.99■■□□□ 1.11
MATR3-239ENST00000514694 CARD11Q9BXL7 1154 aa21.99■■□□□ 1.11
MATR3-239ENST00000514694 NUTM2FA1L443 756 aa21.98■■□□□ 1.11
MATR3-239ENST00000514694 ADGRB2O60241 1585 aa21.97■■□□□ 1.11
MATR3-239ENST00000514694 BRINP3Q76B58 766 aa21.97■■□□□ 1.11
MATR3-239ENST00000514694 CENPJQ9HC77 1338 aaPredicted RBP21.96■■□□□ 1.11
MATR3-239ENST00000514694 ORAI2Q96SN7 254 aa21.95■■□□□ 1.1
MATR3-239ENST00000514694 FMN2Q9NZ56 1722 aa21.94■■□□□ 1.1
MATR3-239ENST00000514694 PRR36Q9H6K5 1346 aa21.92■■□□□ 1.1
MATR3-239ENST00000514694 WASLO00401 505 aaPredicted RBP21.92■■□□□ 1.1
MATR3-239ENST00000514694 DDX17Q92841 729 aaKnown RBP21.92■■□□□ 1.1
MATR3-239ENST00000514694 QRICH2Q9H0J4 1663 aa21.91■■□□□ 1.1
MATR3-239ENST00000514694 USP32Q8NFA0 1604 aa21.9■■□□□ 1.1
MATR3-239ENST00000514694 ESCO1Q5FWF5 840 aa21.89■■□□□ 1.09
MATR3-239ENST00000514694 EIF3AQ14152 1382 aaKnown RBP21.88■■□□□ 1.09
MATR3-239ENST00000514694 CDK19Q9BWU1 502 aa21.88■■□□□ 1.09
MATR3-239ENST00000514694 TULP4Q9NRJ4 1543 aa21.88■■□□□ 1.09
MATR3-239ENST00000514694 AHDC1Q5TGY3 1603 aaPredicted RBP21.87■■□□□ 1.09
MATR3-239ENST00000514694 ANKARQ7Z5J8 1434 aa21.86■■□□□ 1.09
MATR3-239ENST00000514694 ATP7BP35670 1465 aa21.85■■□□□ 1.09
MATR3-239ENST00000514694 USP47Q96K76 1375 aa21.85■■□□□ 1.09
MATR3-239ENST00000514694 ST20-MTHFSA0A0A6YYL1 179 aa21.84■■□□□ 1.09
MATR3-239ENST00000514694 RGPD8O14715 1765 aaPredicted RBP21.84■■□□□ 1.09
MATR3-239ENST00000514694 COL16A1Q07092 1604 aaPredicted RBP21.84■■□□□ 1.09
MATR3-239ENST00000514694 NHSL1Q5SYE7 1610 aa21.84■■□□□ 1.09
MATR3-239ENST00000514694 CABP2Q9NPB3 220 aa21.83■■□□□ 1.09
MATR3-239ENST00000514694 FOXO3O43524 673 aa21.82■■□□□ 1.08
MATR3-239ENST00000514694 NUDT16Q96DE0 195 aaKnown RBP21.82■■□□□ 1.08
MATR3-239ENST00000514694 TESK2Q96S53 571 aa21.82■■□□□ 1.08
MATR3-239ENST00000514694 PHLPP1O60346 1717 aa21.82■■□□□ 1.08
MATR3-239ENST00000514694 SBNO2Q9Y2G9 1366 aa21.82■■□□□ 1.08
MATR3-239ENST00000514694 PHF8Q9UPP1 1060 aa21.81■■□□□ 1.08
MATR3-239ENST00000514694 XPCQ01831 940 aaPredicted RBP21.8■■□□□ 1.08
MATR3-239ENST00000514694 PMFBP1Q8TBY8 1022 aa21.8■■□□□ 1.08
MATR3-239ENST00000514694 SRPK2P78362 688 aaKnown RBP21.79■■□□□ 1.08
MATR3-239ENST00000514694 PXDNQ92626 1479 aa21.78■■□□□ 1.08
MATR3-239ENST00000514694 SOS2Q07890 1332 aaPredicted RBP21.78■■□□□ 1.08
MATR3-239ENST00000514694 EVC2Q86UK5 1308 aa21.78■■□□□ 1.08
MATR3-239ENST00000514694 ADRA2BP18089 450 aa21.77■■□□□ 1.08
MATR3-239ENST00000514694 KIF1AQ12756 1690 aa21.76■■□□□ 1.07
MATR3-239ENST00000514694 PIAS4Q8N2W9 510 aaPredicted RBP21.76■■□□□ 1.07
MATR3-239ENST00000514694 NPHP3Q7Z494 1330 aa21.76■■□□□ 1.07
MATR3-239ENST00000514694 TOPAZ1Q8N9V7 1692 aa21.75■■□□□ 1.07
MATR3-239ENST00000514694 CCDC61Q9Y6R9 512 aa21.75■■□□□ 1.07
MATR3-239ENST00000514694 MSH5O43196 834 aa21.73■■□□□ 1.07
MATR3-239ENST00000514694 DISP3Q9P2K9 1392 aa21.73■■□□□ 1.07
MATR3-239ENST00000514694 PPIP5K1Q6PFW1 1433 aa21.72■■□□□ 1.07
MATR3-239ENST00000514694 PLEKHG3A1L390 1219 aa21.71■■□□□ 1.07
MATR3-239ENST00000514694 KRT28Q7Z3Y7 464 aa21.71■■□□□ 1.07
MATR3-239ENST00000514694 JCADQ9P266 1359 aa21.71■■□□□ 1.07
MATR3-239ENST00000514694 HSPA5P11021 654 aaKnown RBP21.7■■□□□ 1.06
MATR3-239ENST00000514694 CABP1Q9NZU7 370 aa21.7■■□□□ 1.06
MATR3-239ENST00000514694 ITSN1Q15811 1721 aa21.69■■□□□ 1.06
MATR3-239ENST00000514694 NGDNQ8NEJ9 315 aaKnown RBP21.69■■□□□ 1.06
MATR3-239ENST00000514694 LRRC59Q96AG4 307 aaKnown RBP21.69■■□□□ 1.06
MATR3-239ENST00000514694 ACEP12821 1306 aa21.69■■□□□ 1.06
MATR3-239ENST00000514694 POLR3AO14802 1390 aaPredicted RBP21.69■■□□□ 1.06
MATR3-239ENST00000514694 PNPLA6Q8IY17 1366 aa21.68■■□□□ 1.06
MATR3-239ENST00000514694 EIF4G2P78344 907 aaKnown RBP eCLIP21.67■■□□□ 1.06
MATR3-239ENST00000514694 PSME1Q06323 249 aa21.67■■□□□ 1.06
MATR3-239ENST00000514694 ATAD2Q6PL18 1390 aa21.66■■□□□ 1.06
MATR3-239ENST00000514694 SPATA31A3Q5VYP0 1347 aa21.65■■□□□ 1.06
MATR3-239ENST00000514694 SHPRHQ149N8 1683 aa21.65■■□□□ 1.06
MATR3-239ENST00000514694 TRPM3Q9HCF6 1732 aaPredicted RBP21.63■■□□□ 1.05
MATR3-239ENST00000514694 SBNO1A3KN83 1393 aa21.63■■□□□ 1.05
MATR3-239ENST00000514694 LRP6O75581 1613 aa21.63■■□□□ 1.05
MATR3-239ENST00000514694 TMF1P82094 1093 aa21.63■■□□□ 1.05
MATR3-239ENST00000514694 TNS3Q68CZ2 1445 aa21.63■■□□□ 1.05
MATR3-239ENST00000514694 PUS7Q96PZ0 661 aaKnown RBP21.62■■□□□ 1.05
MATR3-239ENST00000514694 SLC12A5Q9H2X9 1139 aa21.62■■□□□ 1.05
MATR3-239ENST00000514694 MED1Q15648 1581 aaPredicted RBP21.61■■□□□ 1.05
MATR3-239ENST00000514694 CD163L1Q9NR16 1453 aa21.61■■□□□ 1.05
MATR3-239ENST00000514694 SPATA31A6Q5VVP1 1343 aa21.59■■□□□ 1.05
MATR3-239ENST00000514694 SLC24A1O60721 1099 aa21.59■■□□□ 1.05
MATR3-239ENST00000514694 CPSF1Q10570 1443 aaKnown RBP21.59■■□□□ 1.05
MATR3-239ENST00000514694 TMC1Q8TDI8 760 aa21.59■■□□□ 1.05
MATR3-239ENST00000514694 COL22A1Q8NFW1 1626 aaPredicted RBP21.58■■□□□ 1.05
MATR3-239ENST00000514694 USP6P35125 1406 aa21.58■■□□□ 1.05
MATR3-239ENST00000514694 SSH2Q76I76 1423 aa21.58■■□□□ 1.05
MATR3-239ENST00000514694 NUTM2BA6NNL0 878 aaPredicted RBP21.58■■□□□ 1.05
MATR3-239ENST00000514694 NUTM2EB1AL46 878 aaPredicted RBP21.58■■□□□ 1.05
MATR3-239ENST00000514694 C11orf95C9JLR9 678 aaPredicted RBP21.58■■□□□ 1.05
MATR3-239ENST00000514694 NUTM2AQ8IVF1 878 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms