RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 TRAK1Q9UPV9 953 aa17.82■□□□□ 0.44
COPB2-212ENST00000514508 CLSPNQ9HAW4 1339 aa17.81■□□□□ 0.44
COPB2-212ENST00000514508 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
COPB2-212ENST00000514508 POGKQ9P215 609 aa17.81■□□□□ 0.44
COPB2-212ENST00000514508 ARHGEF28Q8N1W1 1705 aaKnown RBP17.79■□□□□ 0.44
COPB2-212ENST00000514508 NBPF1Q3BBV0 1214 aa17.79■□□□□ 0.44
COPB2-212ENST00000514508 TRPM1Q7Z4N2 1603 aa17.79■□□□□ 0.44
COPB2-212ENST00000514508 C1orf167Q5SNV9 1468 aa17.78■□□□□ 0.44
COPB2-212ENST00000514508 BRINP3Q76B58 766 aa17.78■□□□□ 0.44
COPB2-212ENST00000514508 PHLPP1O60346 1717 aa17.78■□□□□ 0.44
COPB2-212ENST00000514508 FMN2Q9NZ56 1722 aa17.76■□□□□ 0.43
COPB2-212ENST00000514508 SAFB2Q14151 953 aaKnown RBP eCLIP17.76■□□□□ 0.43
COPB2-212ENST00000514508 AHDC1Q5TGY3 1603 aaPredicted RBP17.76■□□□□ 0.43
COPB2-212ENST00000514508 ADGRB2O60241 1585 aa17.74■□□□□ 0.43
COPB2-212ENST00000514508 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
COPB2-212ENST00000514508 NHSL1Q5SYE7 1610 aa17.73■□□□□ 0.43
COPB2-212ENST00000514508 NBPF8Q3BBV2 869 aa17.73■□□□□ 0.43
COPB2-212ENST00000514508 COL16A1Q07092 1604 aaPredicted RBP17.72■□□□□ 0.43
COPB2-212ENST00000514508 ROCK2O75116 1388 aaKnown RBP17.72■□□□□ 0.43
COPB2-212ENST00000514508 CCER1Q8TC90 406 aaPredicted RBP17.72■□□□□ 0.43
COPB2-212ENST00000514508 TIMELESSQ9UNS1 1208 aa17.72■□□□□ 0.43
COPB2-212ENST00000514508 ORAI2Q96SN7 254 aa17.71■□□□□ 0.43
COPB2-212ENST00000514508 MINK1Q8N4C8 1332 aaPredicted RBP17.71■□□□□ 0.42
COPB2-212ENST00000514508 NUTM2FA1L443 756 aa17.7■□□□□ 0.42
COPB2-212ENST00000514508 ESCO1Q5FWF5 840 aa17.7■□□□□ 0.42
COPB2-212ENST00000514508 RGPD8O14715 1765 aaPredicted RBP17.7■□□□□ 0.42
COPB2-212ENST00000514508 GPRASP1Q5JY77 1395 aa17.69■□□□□ 0.42
COPB2-212ENST00000514508 HIRIP3Q9BW71 556 aaPredicted RBP17.69■□□□□ 0.42
COPB2-212ENST00000514508 EIF3AQ14152 1382 aaKnown RBP17.68■□□□□ 0.42
COPB2-212ENST00000514508 RALGAPBQ86X10 1494 aa17.68■□□□□ 0.42
COPB2-212ENST00000514508 JCADQ9P266 1359 aa17.67■□□□□ 0.42
COPB2-212ENST00000514508 ANKARQ7Z5J8 1434 aa17.67■□□□□ 0.42
COPB2-212ENST00000514508 WASLO00401 505 aaPredicted RBP17.67■□□□□ 0.42
COPB2-212ENST00000514508 KIF1AQ12756 1690 aa17.67■□□□□ 0.42
COPB2-212ENST00000514508 CENPJQ9HC77 1338 aaPredicted RBP17.67■□□□□ 0.42
COPB2-212ENST00000514508 USP32Q8NFA0 1604 aa17.65■□□□□ 0.42
COPB2-212ENST00000514508 QRICH2Q9H0J4 1663 aa17.65■□□□□ 0.42
COPB2-212ENST00000514508 TULP4Q9NRJ4 1543 aa17.65■□□□□ 0.42
COPB2-212ENST00000514508 NPHP3Q7Z494 1330 aa17.65■□□□□ 0.42
COPB2-212ENST00000514508 DDX17Q92841 729 aaKnown RBP17.64■□□□□ 0.41
COPB2-212ENST00000514508 LRRC59Q96AG4 307 aaKnown RBP17.64■□□□□ 0.41
COPB2-212ENST00000514508 CARD11Q9BXL7 1154 aa17.64■□□□□ 0.41
COPB2-212ENST00000514508 SOS2Q07890 1332 aaPredicted RBP17.64■□□□□ 0.41
COPB2-212ENST00000514508 SHPRHQ149N8 1683 aa17.64■□□□□ 0.41
COPB2-212ENST00000514508 MED1Q15648 1581 aaPredicted RBP17.63■□□□□ 0.41
COPB2-212ENST00000514508 PHF8Q9UPP1 1060 aa17.63■□□□□ 0.41
COPB2-212ENST00000514508 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
COPB2-212ENST00000514508 FOXO3O43524 673 aa17.61■□□□□ 0.41
COPB2-212ENST00000514508 CDK19Q9BWU1 502 aa17.61■□□□□ 0.41
COPB2-212ENST00000514508 SPATA31A6Q5VVP1 1343 aa17.6■□□□□ 0.41
COPB2-212ENST00000514508 PRR36Q9H6K5 1346 aa17.6■□□□□ 0.41
COPB2-212ENST00000514508 ATP7BP35670 1465 aa17.59■□□□□ 0.41
COPB2-212ENST00000514508 PXDNQ92626 1479 aa17.59■□□□□ 0.41
COPB2-212ENST00000514508 DISP3Q9P2K9 1392 aa17.59■□□□□ 0.41
COPB2-212ENST00000514508 NUDT16Q96DE0 195 aaKnown RBP17.59■□□□□ 0.41
COPB2-212ENST00000514508 PMFBP1Q8TBY8 1022 aa17.57■□□□□ 0.4
COPB2-212ENST00000514508 PNPLA6Q8IY17 1366 aa17.56■□□□□ 0.4
COPB2-212ENST00000514508 EVC2Q86UK5 1308 aa17.56■□□□□ 0.4
COPB2-212ENST00000514508 SRPK2P78362 688 aaKnown RBP17.56■□□□□ 0.4
COPB2-212ENST00000514508 KRT28Q7Z3Y7 464 aa17.56■□□□□ 0.4
COPB2-212ENST00000514508 CCDC61Q9Y6R9 512 aa17.56■□□□□ 0.4
COPB2-212ENST00000514508 SBNO2Q9Y2G9 1366 aa17.55■□□□□ 0.4
COPB2-212ENST00000514508 TOPAZ1Q8N9V7 1692 aa17.55■□□□□ 0.4
COPB2-212ENST00000514508 XPCQ01831 940 aaPredicted RBP17.55■□□□□ 0.4
COPB2-212ENST00000514508 PSME1Q06323 249 aa17.55■□□□□ 0.4
COPB2-212ENST00000514508 NGDNQ8NEJ9 315 aaKnown RBP17.53■□□□□ 0.4
COPB2-212ENST00000514508 CABP2Q9NPB3 220 aa17.53■□□□□ 0.4
COPB2-212ENST00000514508 COL22A1Q8NFW1 1626 aaPredicted RBP17.53■□□□□ 0.4
COPB2-212ENST00000514508 SBNO1A3KN83 1393 aa17.52■□□□□ 0.39
COPB2-212ENST00000514508 SPATA31A3Q5VYP0 1347 aa17.51■□□□□ 0.39
COPB2-212ENST00000514508 LRP6O75581 1613 aa17.51■□□□□ 0.39
COPB2-212ENST00000514508 PLEKHG3A1L390 1219 aa17.51■□□□□ 0.39
COPB2-212ENST00000514508 TNS3Q68CZ2 1445 aa17.5■□□□□ 0.39
COPB2-212ENST00000514508 NUTM2BA6NNL0 878 aaPredicted RBP17.5■□□□□ 0.39
COPB2-212ENST00000514508 NUTM2EB1AL46 878 aaPredicted RBP17.5■□□□□ 0.39
COPB2-212ENST00000514508 NUTM2AQ8IVF1 878 aaPredicted RBP17.5■□□□□ 0.39
COPB2-212ENST00000514508 TRPM3Q9HCF6 1732 aaPredicted RBP17.5■□□□□ 0.39
COPB2-212ENST00000514508 PPIP5K1Q6PFW1 1433 aa17.49■□□□□ 0.39
COPB2-212ENST00000514508 SLC24A1O60721 1099 aa17.49■□□□□ 0.39
COPB2-212ENST00000514508 MEX3CQ5U5Q3 659 aaKnown RBP17.49■□□□□ 0.39
COPB2-212ENST00000514508 POLR3AO14802 1390 aaPredicted RBP17.49■□□□□ 0.39
COPB2-212ENST00000514508 USP47Q96K76 1375 aa17.49■□□□□ 0.39
COPB2-212ENST00000514508 ACEP12821 1306 aa17.48■□□□□ 0.39
COPB2-212ENST00000514508 ST20-MTHFSA0A0A6YYL1 179 aa17.48■□□□□ 0.39
COPB2-212ENST00000514508 ARHGEF10O15013 1369 aa17.47■□□□□ 0.39
COPB2-212ENST00000514508 ATAD2Q6PL18 1390 aa17.47■□□□□ 0.39
COPB2-212ENST00000514508 TESK2Q96S53 571 aa17.46■□□□□ 0.39
COPB2-212ENST00000514508 ALS2Q96Q42 1657 aa17.45■□□□□ 0.38
COPB2-212ENST00000514508 LMOD2Q6P5Q4 547 aa17.45■□□□□ 0.38
COPB2-212ENST00000514508 CABP1Q9NZU7 370 aa17.45■□□□□ 0.38
COPB2-212ENST00000514508 PUS7Q96PZ0 661 aaKnown RBP17.44■□□□□ 0.38
COPB2-212ENST00000514508 PAK3O75914 559 aaPredicted RBP17.43■□□□□ 0.38
COPB2-212ENST00000514508 RGS17Q9UGC6 210 aaPredicted RBP17.43■□□□□ 0.38
COPB2-212ENST00000514508 MARF1Q9Y4F3 1742 aaKnown RBP17.43■□□□□ 0.38
COPB2-212ENST00000514508 BRD4O60885 1362 aaPredicted RBP17.42■□□□□ 0.38
COPB2-212ENST00000514508 ADAMTS2O95450 1211 aa17.42■□□□□ 0.38
COPB2-212ENST00000514508 AKAP12Q02952 1782 aa17.4■□□□□ 0.38
COPB2-212ENST00000514508 TMF1P82094 1093 aa17.4■□□□□ 0.38
COPB2-212ENST00000514508 ZNF772Q68DY9 489 aaPredicted RBP17.4■□□□□ 0.38
COPB2-212ENST00000514508 C8orf37Q96NL8 207 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms