RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 JCADQ9P266 1359 aa27.59■■■□□ 2.01
LPCAT1-206ENST00000514484 SHPRHQ149N8 1683 aa27.59■■■□□ 2.01
LPCAT1-206ENST00000514484 DDX17Q92841 729 aaKnown RBP27.58■■■□□ 2.01
LPCAT1-206ENST00000514484 FMN2Q9NZ56 1722 aa27.55■■■□□ 2
LPCAT1-206ENST00000514484 ORAI2Q96SN7 254 aa27.53■■■□□ 2
LPCAT1-206ENST00000514484 DLC1Q96QB1 1528 aa27.51■■■□□ 2
LPCAT1-206ENST00000514484 NUTM2FA1L443 756 aa27.51■■□□□ 1.99
LPCAT1-206ENST00000514484 SAFB2Q14151 953 aaKnown RBP eCLIP27.51■■□□□ 1.99
LPCAT1-206ENST00000514484 RGPD8O14715 1765 aaPredicted RBP27.5■■□□□ 1.99
LPCAT1-206ENST00000514484 LRP6O75581 1613 aa27.5■■□□□ 1.99
LPCAT1-206ENST00000514484 PRAM1Q96QH2 718 aa27.49■■□□□ 1.99
LPCAT1-206ENST00000514484 ARHGEF28Q8N1W1 1705 aaKnown RBP27.48■■□□□ 1.99
LPCAT1-206ENST00000514484 TRAK1Q9UPV9 953 aa27.47■■□□□ 1.99
LPCAT1-206ENST00000514484 STAC3Q96MF2 364 aa27.46■■□□□ 1.99
LPCAT1-206ENST00000514484 KIAA1210Q9ULL0 1709 aa27.45■■□□□ 1.99
LPCAT1-206ENST00000514484 TRIM26Q12899 539 aaPredicted RBP27.45■■□□□ 1.98
LPCAT1-206ENST00000514484 SIRT1Q96EB6 747 aa27.45■■□□□ 1.98
LPCAT1-206ENST00000514484 RGS17Q9UGC6 210 aaPredicted RBP27.45■■□□□ 1.98
LPCAT1-206ENST00000514484 ESCO1Q5FWF5 840 aa27.44■■□□□ 1.98
LPCAT1-206ENST00000514484 SIN3AQ96ST3 1273 aa27.44■■□□□ 1.98
LPCAT1-206ENST00000514484 POGKQ9P215 609 aa27.43■■□□□ 1.98
LPCAT1-206ENST00000514484 SPATA31A6Q5VVP1 1343 aa27.42■■□□□ 1.98
LPCAT1-206ENST00000514484 ADGRB2O60241 1585 aa27.42■■□□□ 1.98
LPCAT1-206ENST00000514484 PNPLA6Q8IY17 1366 aa27.4■■□□□ 1.98
LPCAT1-206ENST00000514484 KIF1AQ12756 1690 aa27.4■■□□□ 1.98
LPCAT1-206ENST00000514484 NUTM2BA6NNL0 878 aaPredicted RBP27.39■■□□□ 1.98
LPCAT1-206ENST00000514484 NUTM2EB1AL46 878 aaPredicted RBP27.39■■□□□ 1.98
LPCAT1-206ENST00000514484 NUTM2AQ8IVF1 878 aaPredicted RBP27.39■■□□□ 1.98
LPCAT1-206ENST00000514484 LRRC59Q96AG4 307 aaKnown RBP27.39■■□□□ 1.98
LPCAT1-206ENST00000514484 USP32Q8NFA0 1604 aa27.38■■□□□ 1.97
LPCAT1-206ENST00000514484 NEUROD1Q13562 356 aa27.38■■□□□ 1.97
LPCAT1-206ENST00000514484 SOS2Q07890 1332 aaPredicted RBP27.38■■□□□ 1.97
LPCAT1-206ENST00000514484 MEX3CQ5U5Q3 659 aaKnown RBP27.37■■□□□ 1.97
LPCAT1-206ENST00000514484 HIRIP3Q9BW71 556 aaPredicted RBP27.37■■□□□ 1.97
LPCAT1-206ENST00000514484 PXDNQ92626 1479 aa27.37■■□□□ 1.97
LPCAT1-206ENST00000514484 XPCQ01831 940 aaPredicted RBP27.36■■□□□ 1.97
LPCAT1-206ENST00000514484 L3MBTL2Q969R5 705 aa27.36■■□□□ 1.97
LPCAT1-206ENST00000514484 MINK1Q8N4C8 1332 aaPredicted RBP27.36■■□□□ 1.97
LPCAT1-206ENST00000514484 SOCS7O14512 581 aa27.34■■□□□ 1.97
LPCAT1-206ENST00000514484 FOXO3O43524 673 aa27.34■■□□□ 1.97
LPCAT1-206ENST00000514484 NPHP3Q7Z494 1330 aa27.34■■□□□ 1.97
LPCAT1-206ENST00000514484 NBPF1Q3BBV0 1214 aa27.33■■□□□ 1.97
LPCAT1-206ENST00000514484 POTEAQ6S8J7 498 aa27.32■■□□□ 1.96
LPCAT1-206ENST00000514484 TRPM1Q7Z4N2 1603 aa27.3■■□□□ 1.96
LPCAT1-206ENST00000514484 COL22A1Q8NFW1 1626 aaPredicted RBP27.3■■□□□ 1.96
LPCAT1-206ENST00000514484 TULP4Q9NRJ4 1543 aa27.27■■□□□ 1.96
LPCAT1-206ENST00000514484 ANKARQ7Z5J8 1434 aa27.27■■□□□ 1.96
LPCAT1-206ENST00000514484 PHF8Q9UPP1 1060 aa27.26■■□□□ 1.95
LPCAT1-206ENST00000514484 PRR36Q9H6K5 1346 aa27.24■■□□□ 1.95
LPCAT1-206ENST00000514484 QRICH2Q9H0J4 1663 aa27.24■■□□□ 1.95
LPCAT1-206ENST00000514484 ITSN1Q15811 1721 aa27.23■■□□□ 1.95
LPCAT1-206ENST00000514484 WASLO00401 505 aaPredicted RBP27.22■■□□□ 1.95
LPCAT1-206ENST00000514484 ADAMTS2O95450 1211 aa27.22■■□□□ 1.95
LPCAT1-206ENST00000514484 PMFBP1Q8TBY8 1022 aa27.22■■□□□ 1.95
LPCAT1-206ENST00000514484 C8orf37Q96NL8 207 aa27.21■■□□□ 1.95
LPCAT1-206ENST00000514484 EIF3AQ14152 1382 aaKnown RBP27.21■■□□□ 1.95
LPCAT1-206ENST00000514484 KRT28Q7Z3Y7 464 aa27.2■■□□□ 1.94
LPCAT1-206ENST00000514484 MARF1Q9Y4F3 1742 aaKnown RBP27.2■■□□□ 1.94
LPCAT1-206ENST00000514484 AFF2P51816 1311 aa27.19■■□□□ 1.94
LPCAT1-206ENST00000514484 ATP7BP35670 1465 aa27.19■■□□□ 1.94
LPCAT1-206ENST00000514484 TRPM3Q9HCF6 1732 aaPredicted RBP27.18■■□□□ 1.94
LPCAT1-206ENST00000514484 TOPAZ1Q8N9V7 1692 aa27.17■■□□□ 1.94
LPCAT1-206ENST00000514484 SPATA31A3Q5VYP0 1347 aa27.16■■□□□ 1.94
LPCAT1-206ENST00000514484 TNS3Q68CZ2 1445 aa27.16■■□□□ 1.94
LPCAT1-206ENST00000514484 ZNF772Q68DY9 489 aaPredicted RBP27.16■■□□□ 1.94
LPCAT1-206ENST00000514484 ROCK2O75116 1388 aaKnown RBP27.15■■□□□ 1.94
LPCAT1-206ENST00000514484 ABCA3Q99758 1704 aa27.15■■□□□ 1.94
LPCAT1-206ENST00000514484 NBPF8Q3BBV2 869 aa27.14■■□□□ 1.94
LPCAT1-206ENST00000514484 CENPJQ9HC77 1338 aaPredicted RBP27.14■■□□□ 1.93
LPCAT1-206ENST00000514484 TONSLQ96HA7 1378 aa27.13■■□□□ 1.93
LPCAT1-206ENST00000514484 PSME1Q06323 249 aa27.13■■□□□ 1.93
LPCAT1-206ENST00000514484 CDK19Q9BWU1 502 aa27.13■■□□□ 1.93
LPCAT1-206ENST00000514484 PLEKHG5O94827 1062 aa27.11■■□□□ 1.93
LPCAT1-206ENST00000514484 NUDT16Q96DE0 195 aaKnown RBP27.11■■□□□ 1.93
LPCAT1-206ENST00000514484 ALS2Q96Q42 1657 aa27.11■■□□□ 1.93
LPCAT1-206ENST00000514484 NGLY1Q96IV0 654 aa27.1■■□□□ 1.93
LPCAT1-206ENST00000514484 SBNO1A3KN83 1393 aa27.09■■□□□ 1.93
LPCAT1-206ENST00000514484 LMOD2Q6P5Q4 547 aa27.09■■□□□ 1.93
LPCAT1-206ENST00000514484 GPRASP1Q5JY77 1395 aa27.07■■□□□ 1.92
LPCAT1-206ENST00000514484 NGDNQ8NEJ9 315 aaKnown RBP27.06■■□□□ 1.92
LPCAT1-206ENST00000514484 CABLES1Q8TDN4 633 aa27.05■■□□□ 1.92
LPCAT1-206ENST00000514484 ARHGEF10O15013 1369 aa27.04■■□□□ 1.92
LPCAT1-206ENST00000514484 RALGAPBQ86X10 1494 aa27.04■■□□□ 1.92
LPCAT1-206ENST00000514484 SRPK2P78362 688 aaKnown RBP27.03■■□□□ 1.92
LPCAT1-206ENST00000514484 PCGF6Q9BYE7 350 aa27.03■■□□□ 1.92
LPCAT1-206ENST00000514484 CRYBG1Q9Y4K1 1723 aa27.02■■□□□ 1.92
LPCAT1-206ENST00000514484 RXRBP28702 533 aa27.01■■□□□ 1.91
LPCAT1-206ENST00000514484 HAP1P54257 671 aaPredicted RBP27.01■■□□□ 1.91
LPCAT1-206ENST00000514484 QTRT2Q9H974 415 aaKnown RBP27.01■■□□□ 1.91
LPCAT1-206ENST00000514484 CABP2Q9NPB3 220 aa27.01■■□□□ 1.91
LPCAT1-206ENST00000514484 USP21Q9UK80 565 aa27.01■■□□□ 1.91
LPCAT1-206ENST00000514484 PLCH1Q4KWH8 1693 aa27■■□□□ 1.91
LPCAT1-206ENST00000514484 PAK3O75914 559 aaPredicted RBP26.99■■□□□ 1.91
LPCAT1-206ENST00000514484 FNBP4Q8N3X1 1017 aaPredicted RBP26.99■■□□□ 1.91
LPCAT1-206ENST00000514484 CCDC61Q9Y6R9 512 aa26.99■■□□□ 1.91
LPCAT1-206ENST00000514484 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.99■■□□□ 1.91
LPCAT1-206ENST00000514484 PPIP5K1Q6PFW1 1433 aa26.99■■□□□ 1.91
LPCAT1-206ENST00000514484 ACEP12821 1306 aa26.97■■□□□ 1.91
LPCAT1-206ENST00000514484 POLR3AO14802 1390 aaPredicted RBP26.97■■□□□ 1.91
LPCAT1-206ENST00000514484 BCL9LQ86UU0 1499 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms