RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 MYOM2P54296 1465 aa14.38□□□□□ -0.11
NEDD9-214ENST00000513989 PRAG1Q86YV5 1406 aa14.37□□□□□ -0.11
NEDD9-214ENST00000513989 SPATA31A6Q5VVP1 1343 aa14.37□□□□□ -0.11
NEDD9-214ENST00000513989 PTCH1Q13635 1447 aa14.36□□□□□ -0.11
NEDD9-214ENST00000513989 CARD11Q9BXL7 1154 aa14.35□□□□□ -0.11
NEDD9-214ENST00000513989 ROBO2Q9HCK4 1378 aa14.34□□□□□ -0.11
NEDD9-214ENST00000513989 ROCK2O75116 1388 aaKnown RBP14.34□□□□□ -0.11
NEDD9-214ENST00000513989 PIK3C2GO75747 1445 aa14.33□□□□□ -0.11
NEDD9-214ENST00000513989 NRXN1Q9ULB1 1477 aa14.33□□□□□ -0.12
NEDD9-214ENST00000513989 NBPF1Q3BBV0 1214 aa14.33□□□□□ -0.12
NEDD9-214ENST00000513989 TMEM132EQ6IEE7 984 aa14.33□□□□□ -0.12
NEDD9-214ENST00000513989 DDX17Q92841 729 aaKnown RBP14.33□□□□□ -0.12
NEDD9-214ENST00000513989 C1orf167Q5SNV9 1468 aa14.32□□□□□ -0.12
NEDD9-214ENST00000513989 STK26Q9P289 416 aa14.31□□□□□ -0.12
NEDD9-214ENST00000513989 KNDC1Q76NI1 1749 aa14.31□□□□□ -0.12
NEDD9-214ENST00000513989 SLC24A1O60721 1099 aa14.29□□□□□ -0.12
NEDD9-214ENST00000513989 PNPLA6Q8IY17 1366 aa14.29□□□□□ -0.12
NEDD9-214ENST00000513989 CDC42BPGQ6DT37 1551 aa14.29□□□□□ -0.12
NEDD9-214ENST00000513989 COL22A1Q8NFW1 1626 aaPredicted RBP14.29□□□□□ -0.12
NEDD9-214ENST00000513989 EIF4G2P78344 907 aaKnown RBP eCLIP14.28□□□□□ -0.12
NEDD9-214ENST00000513989 SIRT1Q96EB6 747 aa14.28□□□□□ -0.12
NEDD9-214ENST00000513989 POGKQ9P215 609 aa14.28□□□□□ -0.12
NEDD9-214ENST00000513989 TRAK1Q9UPV9 953 aa14.28□□□□□ -0.12
NEDD9-214ENST00000513989 MARF1Q9Y4F3 1742 aaKnown RBP14.28□□□□□ -0.12
NEDD9-214ENST00000513989 RGPD8O14715 1765 aaPredicted RBP14.27□□□□□ -0.12
NEDD9-214ENST00000513989 MEX3CQ5U5Q3 659 aaKnown RBP14.27□□□□□ -0.13
NEDD9-214ENST00000513989 LRPPRCP42704 1394 aaKnown RBP14.26□□□□□ -0.13
NEDD9-214ENST00000513989 NUTM2BA6NNL0 878 aaPredicted RBP14.26□□□□□ -0.13
NEDD9-214ENST00000513989 NUTM2EB1AL46 878 aaPredicted RBP14.26□□□□□ -0.13
NEDD9-214ENST00000513989 ZNF772Q68DY9 489 aaPredicted RBP14.26□□□□□ -0.13
NEDD9-214ENST00000513989 NUTM2AQ8IVF1 878 aaPredicted RBP14.26□□□□□ -0.13
NEDD9-214ENST00000513989 CDK12Q9NYV4 1490 aaPredicted RBP14.25□□□□□ -0.13
NEDD9-214ENST00000513989 EIF3AQ14152 1382 aaKnown RBP14.25□□□□□ -0.13
NEDD9-214ENST00000513989 GPRASP1Q5JY77 1395 aa14.25□□□□□ -0.13
NEDD9-214ENST00000513989 ABCC11Q96J66 1382 aa14.25□□□□□ -0.13
NEDD9-214ENST00000513989 FMN2Q9NZ56 1722 aa14.25□□□□□ -0.13
NEDD9-214ENST00000513989 LRRC59Q96AG4 307 aaKnown RBP14.25□□□□□ -0.13
NEDD9-214ENST00000513989 ORAI2Q96SN7 254 aa14.25□□□□□ -0.13
NEDD9-214ENST00000513989 RALGAPBQ86X10 1494 aa14.25□□□□□ -0.13
NEDD9-214ENST00000513989 TECPR2O15040 1411 aa14.24□□□□□ -0.13
NEDD9-214ENST00000513989 AFF2P51816 1311 aa14.24□□□□□ -0.13
NEDD9-214ENST00000513989 SOS2Q07890 1332 aaPredicted RBP14.24□□□□□ -0.13
NEDD9-214ENST00000513989 YTHDC2Q9H6S0 1430 aaKnown RBP14.24□□□□□ -0.13
NEDD9-214ENST00000513989 EP400Q96L91 3159 aa14.23□□□□□ -0.13
NEDD9-214ENST00000513989 PXDNQ92626 1479 aa14.23□□□□□ -0.13
NEDD9-214ENST00000513989 PRAM1Q96QH2 718 aa14.22□□□□□ -0.13
NEDD9-214ENST00000513989 RGS12O14924 1447 aa14.22□□□□□ -0.13
NEDD9-214ENST00000513989 UPF1Q92900 1129 aaKnown RBP eCLIP14.21□□□□□ -0.13
NEDD9-214ENST00000513989 PLEKHH1Q9ULM0 1364 aa14.21□□□□□ -0.14
NEDD9-214ENST00000513989 CENPJQ9HC77 1338 aaPredicted RBP14.2□□□□□ -0.14
NEDD9-214ENST00000513989 ST20-MTHFSA0A0A6YYL1 179 aa14.2□□□□□ -0.14
NEDD9-214ENST00000513989 USP47Q96K76 1375 aa14.2□□□□□ -0.14
NEDD9-214ENST00000513989 HSPA5P11021 654 aaKnown RBP14.19□□□□□ -0.14
NEDD9-214ENST00000513989 RXRBP28702 533 aa14.19□□□□□ -0.14
NEDD9-214ENST00000513989 WAPLQ7Z5K2 1190 aa14.19□□□□□ -0.14
NEDD9-214ENST00000513989 C8orf37Q96NL8 207 aa14.19□□□□□ -0.14
NEDD9-214ENST00000513989 SAFB2Q14151 953 aaKnown RBP eCLIP14.18□□□□□ -0.14
NEDD9-214ENST00000513989 KIF1AQ12756 1690 aa14.17□□□□□ -0.14
NEDD9-214ENST00000513989 CDCA8Q53HL2 280 aa14.17□□□□□ -0.14
NEDD9-214ENST00000513989 KIAA1210Q9ULL0 1709 aa14.17□□□□□ -0.14
NEDD9-214ENST00000513989 ADGRB1O14514 1584 aa14.17□□□□□ -0.14
NEDD9-214ENST00000513989 ABCA3Q99758 1704 aa14.16□□□□□ -0.14
NEDD9-214ENST00000513989 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.16□□□□□ -0.14
NEDD9-214ENST00000513989 ADAMTS2O95450 1211 aa14.16□□□□□ -0.14
NEDD9-214ENST00000513989 TMF1P82094 1093 aa14.16□□□□□ -0.14
NEDD9-214ENST00000513989 USP32Q8NFA0 1604 aa14.15□□□□□ -0.14
NEDD9-214ENST00000513989 SRCAPQ6ZRS2 3230 aa14.15□□□□□ -0.14
NEDD9-214ENST00000513989 QTRT2Q9H974 415 aaKnown RBP14.15□□□□□ -0.14
NEDD9-214ENST00000513989 TRPM1Q7Z4N2 1603 aa14.15□□□□□ -0.14
NEDD9-214ENST00000513989 EVC2Q86UK5 1308 aa14.15□□□□□ -0.15
NEDD9-214ENST00000513989 RBM6P78332 1123 aaKnown RBP14.13□□□□□ -0.15
NEDD9-214ENST00000513989 XPCQ01831 940 aaPredicted RBP14.13□□□□□ -0.15
NEDD9-214ENST00000513989 ESCO1Q5FWF5 840 aa14.13□□□□□ -0.15
NEDD9-214ENST00000513989 HIRIP3Q9BW71 556 aaPredicted RBP14.13□□□□□ -0.15
NEDD9-214ENST00000513989 ATRNO75882 1429 aa14.13□□□□□ -0.15
NEDD9-214ENST00000513989 NPHP3Q7Z494 1330 aa14.13□□□□□ -0.15
NEDD9-214ENST00000513989 MINK1Q8N4C8 1332 aaPredicted RBP14.13□□□□□ -0.15
NEDD9-214ENST00000513989 BCL9LQ86UU0 1499 aa14.12□□□□□ -0.15
NEDD9-214ENST00000513989 DLC1Q96QB1 1528 aa14.12□□□□□ -0.15
NEDD9-214ENST00000513989 FOXO3O43524 673 aa14.12□□□□□ -0.15
NEDD9-214ENST00000513989 FNBP4Q8N3X1 1017 aaPredicted RBP14.12□□□□□ -0.15
NEDD9-214ENST00000513989 NGLY1Q96IV0 654 aa14.12□□□□□ -0.15
NEDD9-214ENST00000513989 BRWD3Q6RI45 1802 aa14.12□□□□□ -0.15
NEDD9-214ENST00000513989 NUTM2FA1L443 756 aa14.11□□□□□ -0.15
NEDD9-214ENST00000513989 WASLO00401 505 aaPredicted RBP14.11□□□□□ -0.15
NEDD9-214ENST00000513989 ADGRB2O60241 1585 aa14.11□□□□□ -0.15
NEDD9-214ENST00000513989 PUS7Q96PZ0 661 aaKnown RBP14.11□□□□□ -0.15
NEDD9-214ENST00000513989 TESK2Q96S53 571 aa14.11□□□□□ -0.15
NEDD9-214ENST00000513989 SRPK2P78362 688 aaKnown RBP14.1□□□□□ -0.15
NEDD9-214ENST00000513989 CDK19Q9BWU1 502 aa14.1□□□□□ -0.15
NEDD9-214ENST00000513989 PLCH1Q4KWH8 1693 aa14.1□□□□□ -0.15
NEDD9-214ENST00000513989 TRPM3Q9HCF6 1732 aaPredicted RBP14.1□□□□□ -0.15
NEDD9-214ENST00000513989 GLI3P10071 1580 aa14.09□□□□□ -0.15
NEDD9-214ENST00000513989 USP21Q9UK80 565 aa14.09□□□□□ -0.15
NEDD9-214ENST00000513989 SBNO2Q9Y2G9 1366 aa14.09□□□□□ -0.15
NEDD9-214ENST00000513989 ZNF316A6NFI3 1004 aaPredicted RBP14.08□□□□□ -0.16
NEDD9-214ENST00000513989 POLR3GLQ9BT43 218 aa14.08□□□□□ -0.16
NEDD9-214ENST00000513989 CRYBG1Q9Y4K1 1723 aa14.07□□□□□ -0.16
NEDD9-214ENST00000513989 SLIT2O94813 1529 aa14.07□□□□□ -0.16
NEDD9-214ENST00000513989 SPATA31A3Q5VYP0 1347 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms