RNA–Protein interactions for RNA: ENST00000513870.1

HMGN1P15-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 15, humanhuman

BASIC

Gene HMGN1P15, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P15-201ENST00000513870 TLL1O43897 1013 aa11.75□□□□□ -0.53
HMGN1P15-201ENST00000513870 KCNC4Q03721 635 aa11.75□□□□□ -0.53
HMGN1P15-201ENST00000513870 FMNL1O95466 1100 aaPredicted RBP11.74□□□□□ -0.53
HMGN1P15-201ENST00000513870 ITGBL1O95965 494 aaPredicted RBP11.74□□□□□ -0.53
HMGN1P15-201ENST00000513870 RNF19BQ6ZMZ0 732 aa11.74□□□□□ -0.53
HMGN1P15-201ENST00000513870 SYMPKQ92797 1274 aaKnown RBP11.74□□□□□ -0.53
HMGN1P15-201ENST00000513870 QPCTQ16769 361 aa11.72□□□□□ -0.53
HMGN1P15-201ENST00000513870 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
HMGN1P15-201ENST00000513870 THAP11Q96EK4 314 aa11.72□□□□□ -0.53
HMGN1P15-201ENST00000513870 ZBTB3Q9H5J0 574 aa11.72□□□□□ -0.53
HMGN1P15-201ENST00000513870 NUTM2BA6NNL0 878 aaPredicted RBP11.71□□□□□ -0.53
HMGN1P15-201ENST00000513870 NUTM2EB1AL46 878 aaPredicted RBP11.71□□□□□ -0.53
HMGN1P15-201ENST00000513870 MTMR2Q13614 643 aa11.71□□□□□ -0.53
HMGN1P15-201ENST00000513870 TUSC1Q2TAM9 212 aa11.71□□□□□ -0.53
HMGN1P15-201ENST00000513870 NUTM2DQ5VT03 806 aaPredicted RBP11.71□□□□□ -0.53
HMGN1P15-201ENST00000513870 BRICD5Q6PL45 260 aa11.71□□□□□ -0.53
HMGN1P15-201ENST00000513870 NUTM2AQ8IVF1 878 aaPredicted RBP11.71□□□□□ -0.53
HMGN1P15-201ENST00000513870 NKX2-3Q8TAU0 364 aa11.71□□□□□ -0.53
HMGN1P15-201ENST00000513870 SPSB2Q99619 263 aa11.71□□□□□ -0.53
HMGN1P15-201ENST00000513870 SALL2Q9Y467 1007 aaPredicted RBP11.71□□□□□ -0.53
HMGN1P15-201ENST00000513870 HRCP23327 699 aa11.7□□□□□ -0.54
HMGN1P15-201ENST00000513870 ADH1BP00325 375 aa11.69□□□□□ -0.54
HMGN1P15-201ENST00000513870 PRPF38BQ5VTL8 546 aaKnown RBP11.69□□□□□ -0.54
HMGN1P15-201ENST00000513870 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.69□□□□□ -0.54
HMGN1P15-201ENST00000513870 RETREG3Q86VR2 466 aa11.68□□□□□ -0.54
HMGN1P15-201ENST00000513870 USB1Q9BQ65 265 aaKnown RBP11.68□□□□□ -0.54
HMGN1P15-201ENST00000513870 PLA2G2EQ9NZK7 142 aa11.68□□□□□ -0.54
HMGN1P15-201ENST00000513870 LILRB3O75022 631 aa11.67□□□□□ -0.54
HMGN1P15-201ENST00000513870 SPDYE5A6NIY4 337 aa11.66□□□□□ -0.54
HMGN1P15-201ENST00000513870 RTL5Q5HYW3 569 aaPredicted RBP11.65□□□□□ -0.54
HMGN1P15-201ENST00000513870 PRR7Q8TB68 274 aa11.65□□□□□ -0.54
HMGN1P15-201ENST00000513870 FAM160A2Q8N612 972 aaPredicted RBP11.64□□□□□ -0.55
HMGN1P15-201ENST00000513870 TSC1Q92574 1164 aa11.64□□□□□ -0.55
HMGN1P15-201ENST00000513870 SLC6A16Q9GZN6 736 aa11.64□□□□□ -0.55
HMGN1P15-201ENST00000513870 MSS51Q4VC12 460 aa11.63□□□□□ -0.55
HMGN1P15-201ENST00000513870 FBXO31Q5XUX0 539 aaPredicted RBP11.63□□□□□ -0.55
HMGN1P15-201ENST00000513870 PRDM9Q9NQV7 894 aa11.63□□□□□ -0.55
HMGN1P15-201ENST00000513870 CFAP99D6REC4 459 aa11.62□□□□□ -0.55
HMGN1P15-201ENST00000513870 S1PR4O95977 384 aa11.62□□□□□ -0.55
HMGN1P15-201ENST00000513870 PPP2R2DQ66LE6 453 aa11.61□□□□□ -0.55
HMGN1P15-201ENST00000513870 RFC5P40937 340 aa11.6□□□□□ -0.55
HMGN1P15-201ENST00000513870 IFFO2Q5TF58 517 aa11.6□□□□□ -0.55
HMGN1P15-201ENST00000513870 JUNDP17535 347 aa11.58□□□□□ -0.56
HMGN1P15-201ENST00000513870 GGCXP38435 758 aa11.58□□□□□ -0.56
HMGN1P15-201ENST00000513870 HELBQ8NG08 1087 aaPredicted RBP11.58□□□□□ -0.56
HMGN1P15-201ENST00000513870 AP1G2O75843 785 aa11.57□□□□□ -0.56
HMGN1P15-201ENST00000513870 PPP1R18Q6NYC8 613 aa11.57□□□□□ -0.56
HMGN1P15-201ENST00000513870 DXOO77932 396 aaKnown RBP11.56□□□□□ -0.56
HMGN1P15-201ENST00000513870 MMP16P51512 607 aa11.56□□□□□ -0.56
HMGN1P15-201ENST00000513870 DESI1Q6ICB0 168 aa11.55□□□□□ -0.56
HMGN1P15-201ENST00000513870 PPEF1O14829 653 aaPredicted RBP11.54□□□□□ -0.56
HMGN1P15-201ENST00000513870 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.54□□□□□ -0.56
HMGN1P15-201ENST00000513870 RNF223E7ERA6 249 aa11.53□□□□□ -0.56
HMGN1P15-201ENST00000513870 TMEM259Q4ZIN3 620 aa11.53□□□□□ -0.56
HMGN1P15-201ENST00000513870 A0A0G2JS52 829 aa11.52□□□□□ -0.57
HMGN1P15-201ENST00000513870 CTDSPL2Q05D32 466 aa11.52□□□□□ -0.57
HMGN1P15-201ENST00000513870 FCF1Q9Y324 198 aaKnown RBP11.52□□□□□ -0.57
HMGN1P15-201ENST00000513870 PTPRNQ16849 979 aa11.51□□□□□ -0.57
HMGN1P15-201ENST00000513870 CCDC24Q8N4L8 307 aa11.51□□□□□ -0.57
HMGN1P15-201ENST00000513870 PER1O15534 1290 aaPredicted RBP11.5□□□□□ -0.57
HMGN1P15-201ENST00000513870 USP17L8P0C7I0 530 aa11.5□□□□□ -0.57
HMGN1P15-201ENST00000513870 LYPD8Q6UX82 237 aa11.5□□□□□ -0.57
HMGN1P15-201ENST00000513870 NUDT12Q9BQG2 462 aa11.5□□□□□ -0.57
HMGN1P15-201ENST00000513870 ANKLE1Q8NAG6 615 aa11.49□□□□□ -0.57
HMGN1P15-201ENST00000513870 CCNYL3P0C7X3 344 aa11.48□□□□□ -0.57
HMGN1P15-201ENST00000513870 LRRN4Q8WUT4 740 aa11.47□□□□□ -0.57
HMGN1P15-201ENST00000513870 BANK1Q8NDB2 785 aa11.46□□□□□ -0.57
HMGN1P15-201ENST00000513870 CTHP32929 405 aa11.45□□□□□ -0.58
HMGN1P15-201ENST00000513870 PLA2G2CQ5R387 149 aa11.44□□□□□ -0.58
HMGN1P15-201ENST00000513870 MAP10Q9P2G4 905 aa11.44□□□□□ -0.58
HMGN1P15-201ENST00000513870 SNRKQ9NRH2 765 aa11.43□□□□□ -0.58
HMGN1P15-201ENST00000513870 EVA1BQ9NVM1 165 aa11.43□□□□□ -0.58
HMGN1P15-201ENST00000513870 KCNH2Q12809 1159 aa11.42□□□□□ -0.58
HMGN1P15-201ENST00000513870 HMX1Q9NP08 348 aaPredicted RBP11.42□□□□□ -0.58
HMGN1P15-201ENST00000513870 ZBTB24O43167 697 aaPredicted RBP11.41□□□□□ -0.58
HMGN1P15-201ENST00000513870 F12P00748 615 aaPredicted RBP11.41□□□□□ -0.58
HMGN1P15-201ENST00000513870 PTCRAQ6ISU1 281 aaPredicted RBP11.41□□□□□ -0.58
HMGN1P15-201ENST00000513870 GTF3C3Q9Y5Q9 886 aa11.41□□□□□ -0.58
HMGN1P15-201ENST00000513870 MCM6Q14566 821 aa11.39□□□□□ -0.59
HMGN1P15-201ENST00000513870 NR6A1Q15406 480 aa11.39□□□□□ -0.59
HMGN1P15-201ENST00000513870 MTMR14Q8NCE2 650 aa11.39□□□□□ -0.59
HMGN1P15-201ENST00000513870 UNC93B1Q9H1C4 597 aa11.38□□□□□ -0.59
HMGN1P15-201ENST00000513870 SLC19A1P41440 591 aa11.37□□□□□ -0.59
HMGN1P15-201ENST00000513870 FLIIQ13045 1269 aa11.37□□□□□ -0.59
HMGN1P15-201ENST00000513870 EPS8L1Q8TE68 723 aa11.37□□□□□ -0.59
HMGN1P15-201ENST00000513870 PRKD2Q9BZL6 878 aa11.37□□□□□ -0.59
HMGN1P15-201ENST00000513870 APBB1O00213 710 aa11.36□□□□□ -0.59
HMGN1P15-201ENST00000513870 LIAT1Q6ZQX7 453 aa11.36□□□□□ -0.59
HMGN1P15-201ENST00000513870 EMID1Q96A84 441 aaPredicted RBP11.36□□□□□ -0.59
HMGN1P15-201ENST00000513870 RPIAP49247 311 aa11.35□□□□□ -0.59
HMGN1P15-201ENST00000513870 TRIM34Q9BYJ4 488 aa11.35□□□□□ -0.59
HMGN1P15-201ENST00000513870 TRIM32Q13049 653 aa11.34□□□□□ -0.59
HMGN1P15-201ENST00000513870 GJD4Q96KN9 370 aaPredicted RBP11.34□□□□□ -0.59
HMGN1P15-201ENST00000513870 SOCS7O14512 581 aa11.33□□□□□ -0.6
HMGN1P15-201ENST00000513870 CD2BP2O95400 341 aaKnown RBP11.32□□□□□ -0.6
HMGN1P15-201ENST00000513870 LINC01559Q495D7 138 aa11.32□□□□□ -0.6
HMGN1P15-201ENST00000513870 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
HMGN1P15-201ENST00000513870 ARMC2Q8NEN0 867 aa11.32□□□□□ -0.6
HMGN1P15-201ENST00000513870 BAP1Q92560 729 aa11.32□□□□□ -0.6
HMGN1P15-201ENST00000513870 FKBPLQ9UIM3 349 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms