RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 CHGAP10645 457 aaKnown RBP12.33□□□□□ -0.44
DEPDC1B-205ENST00000512078 E9PCH4 1651 aa12.32□□□□□ -0.44
DEPDC1B-205ENST00000512078 R3HDM1Q15032 1099 aaKnown RBP12.32□□□□□ -0.44
DEPDC1B-205ENST00000512078 SEPT12Q8IYM1 358 aa12.32□□□□□ -0.44
DEPDC1B-205ENST00000512078 ORAI2Q96SN7 254 aa12.32□□□□□ -0.44
DEPDC1B-205ENST00000512078 TNS1Q9HBL0 1735 aaKnown RBP12.32□□□□□ -0.44
DEPDC1B-205ENST00000512078 NWD2Q9ULI1 1742 aa12.32□□□□□ -0.44
DEPDC1B-205ENST00000512078 PXDNQ92626 1479 aa12.32□□□□□ -0.44
DEPDC1B-205ENST00000512078 ANKRD30AQ9BXX3 1397 aa12.31□□□□□ -0.44
DEPDC1B-205ENST00000512078 USP32Q8NFA0 1604 aa12.31□□□□□ -0.44
DEPDC1B-205ENST00000512078 PLCH1Q4KWH8 1693 aa12.31□□□□□ -0.44
DEPDC1B-205ENST00000512078 KRT27Q7Z3Y8 459 aa12.3□□□□□ -0.44
DEPDC1B-205ENST00000512078 METP08581 1390 aa12.3□□□□□ -0.44
DEPDC1B-205ENST00000512078 DISP2A7MBM2 1401 aa12.3□□□□□ -0.44
DEPDC1B-205ENST00000512078 ONECUT3O60422 494 aaPredicted RBP12.3□□□□□ -0.44
DEPDC1B-205ENST00000512078 SENP3-EIF4A1A0A087X0R7 540 aa12.28□□□□□ -0.44
DEPDC1B-205ENST00000512078 NPHP3Q7Z494 1330 aa12.28□□□□□ -0.44
DEPDC1B-205ENST00000512078 ADGRL2O95490 1459 aa12.27□□□□□ -0.44
DEPDC1B-205ENST00000512078 EN1Q05925 392 aaPredicted RBP12.27□□□□□ -0.44
DEPDC1B-205ENST00000512078 CAMTA1Q9Y6Y1 1673 aa12.27□□□□□ -0.45
DEPDC1B-205ENST00000512078 VPS72Q15906 364 aa12.26□□□□□ -0.45
DEPDC1B-205ENST00000512078 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
DEPDC1B-205ENST00000512078 CHD4Q14839 1912 aa12.25□□□□□ -0.45
DEPDC1B-205ENST00000512078 RREB1Q92766 1687 aa12.25□□□□□ -0.45
DEPDC1B-205ENST00000512078 DCAF8L1A6NGE4 600 aa12.25□□□□□ -0.45
DEPDC1B-205ENST00000512078 ADGRB2O60241 1585 aa12.25□□□□□ -0.45
DEPDC1B-205ENST00000512078 NINLQ9Y2I6 1382 aa12.24□□□□□ -0.45
DEPDC1B-205ENST00000512078 PRAG1Q86YV5 1406 aa12.24□□□□□ -0.45
DEPDC1B-205ENST00000512078 ABCA3Q99758 1704 aa12.24□□□□□ -0.45
DEPDC1B-205ENST00000512078 CDC42BPGQ6DT37 1551 aa12.24□□□□□ -0.45
DEPDC1B-205ENST00000512078 NUP188Q5SRE5 1749 aa12.23□□□□□ -0.45
DEPDC1B-205ENST00000512078 NRAPQ86VF7 1730 aa12.23□□□□□ -0.45
DEPDC1B-205ENST00000512078 ANKRD50Q9ULJ7 1429 aa12.23□□□□□ -0.45
DEPDC1B-205ENST00000512078 ZNF784Q8NCA9 323 aaPredicted RBP12.22□□□□□ -0.45
DEPDC1B-205ENST00000512078 CHIC2Q9UKJ5 165 aa12.22□□□□□ -0.45
DEPDC1B-205ENST00000512078 C1QTNF8P60827 252 aa12.21□□□□□ -0.46
DEPDC1B-205ENST00000512078 KANK4Q5T7N3 995 aaPredicted RBP12.21□□□□□ -0.46
DEPDC1B-205ENST00000512078 LRPPRCP42704 1394 aaKnown RBP12.21□□□□□ -0.46
DEPDC1B-205ENST00000512078 ROBO2Q9HCK4 1378 aa12.21□□□□□ -0.46
DEPDC1B-205ENST00000512078 EZH2Q15910 746 aaKnown RBP12.2□□□□□ -0.46
DEPDC1B-205ENST00000512078 NEXMIFQ5QGS0 1516 aa12.2□□□□□ -0.46
DEPDC1B-205ENST00000512078 XPCQ01831 940 aaPredicted RBP12.19□□□□□ -0.46
DEPDC1B-205ENST00000512078 PARD3Q8TEW0 1356 aa12.19□□□□□ -0.46
DEPDC1B-205ENST00000512078 HFM1A2PYH4 1435 aa12.19□□□□□ -0.46
DEPDC1B-205ENST00000512078 KIF1AQ12756 1690 aa12.19□□□□□ -0.46
DEPDC1B-205ENST00000512078 ESCO1Q5FWF5 840 aa12.18□□□□□ -0.46
DEPDC1B-205ENST00000512078 CCDC9Q9Y3X0 531 aaKnown RBP12.18□□□□□ -0.46
DEPDC1B-205ENST00000512078 THSD7AQ9UPZ6 1657 aa12.18□□□□□ -0.46
DEPDC1B-205ENST00000512078 VPS8Q8N3P4 1428 aa12.18□□□□□ -0.46
DEPDC1B-205ENST00000512078 SPATA31A3Q5VYP0 1347 aa12.18□□□□□ -0.46
DEPDC1B-205ENST00000512078 FOXO3O43524 673 aa12.18□□□□□ -0.46
DEPDC1B-205ENST00000512078 CAMKK2Q96RR4 588 aa12.18□□□□□ -0.46
DEPDC1B-205ENST00000512078 PPP1R1BQ9UD71 204 aaPredicted RBP12.18□□□□□ -0.46
DEPDC1B-205ENST00000512078 A0A0G2JS52 829 aa12.17□□□□□ -0.46
DEPDC1B-205ENST00000512078 MYT1Q01538 1121 aa12.17□□□□□ -0.46
DEPDC1B-205ENST00000512078 SPON1Q9HCB6 807 aa12.16□□□□□ -0.46
DEPDC1B-205ENST00000512078 CCDC144AA2RUR9 1427 aa12.15□□□□□ -0.46
DEPDC1B-205ENST00000512078 FAM98CQ17RN3 349 aaKnown RBP12.14□□□□□ -0.47
DEPDC1B-205ENST00000512078 UTRNP46939 3433 aa12.14□□□□□ -0.47
DEPDC1B-205ENST00000512078 KIF1BO60333 1816 aa12.14□□□□□ -0.47
DEPDC1B-205ENST00000512078 KCNQ2O43526 872 aa12.13□□□□□ -0.47
DEPDC1B-205ENST00000512078 ZNF326Q5BKZ1 582 aaKnown RBP12.13□□□□□ -0.47
DEPDC1B-205ENST00000512078 FAM182BQ5T319 152 aa12.13□□□□□ -0.47
DEPDC1B-205ENST00000512078 FMN2Q9NZ56 1722 aa12.13□□□□□ -0.47
DEPDC1B-205ENST00000512078 TNS3Q68CZ2 1445 aa12.13□□□□□ -0.47
DEPDC1B-205ENST00000512078 HAP1P54257 671 aaPredicted RBP12.12□□□□□ -0.47
DEPDC1B-205ENST00000512078 COL14A1Q05707 1796 aaKnown RBP12.12□□□□□ -0.47
DEPDC1B-205ENST00000512078 NRKQ7Z2Y5 1582 aa12.12□□□□□ -0.47
DEPDC1B-205ENST00000512078 CASZ1Q86V15 1759 aa12.11□□□□□ -0.47
DEPDC1B-205ENST00000512078 RGPD8O14715 1765 aaPredicted RBP12.11□□□□□ -0.47
DEPDC1B-205ENST00000512078 CLTCL1P53675 1640 aa12.11□□□□□ -0.47
DEPDC1B-205ENST00000512078 NAIPQ13075 1403 aa12.1□□□□□ -0.47
DEPDC1B-205ENST00000512078 NBPF8Q3BBV2 869 aa12.1□□□□□ -0.47
DEPDC1B-205ENST00000512078 NBPF14Q5TI25 921 aa12.1□□□□□ -0.47
DEPDC1B-205ENST00000512078 MYOM1P52179 1685 aa12.1□□□□□ -0.47
DEPDC1B-205ENST00000512078 TRIM37O94972 964 aa12.09□□□□□ -0.47
DEPDC1B-205ENST00000512078 CABLES1Q8TDN4 633 aa12.09□□□□□ -0.47
DEPDC1B-205ENST00000512078 CEP350Q5VT06 3117 aa12.08□□□□□ -0.48
DEPDC1B-205ENST00000512078 FAM83GA6ND36 823 aa12.08□□□□□ -0.48
DEPDC1B-205ENST00000512078 APBA3O96018 575 aa12.08□□□□□ -0.48
DEPDC1B-205ENST00000512078 KRT28Q7Z3Y7 464 aa12.08□□□□□ -0.48
DEPDC1B-205ENST00000512078 RGPD3A6NKT7 1758 aaPredicted RBP12.08□□□□□ -0.48
DEPDC1B-205ENST00000512078 RGPD4Q7Z3J3 1758 aa12.08□□□□□ -0.48
DEPDC1B-205ENST00000512078 SPATA31A5Q5VU36 1347 aa12.07□□□□□ -0.48
DEPDC1B-205ENST00000512078 SPATA31A7Q8IWB4 1347 aa12.07□□□□□ -0.48
DEPDC1B-205ENST00000512078 FAM196AQ6ZSG2 479 aa12.07□□□□□ -0.48
DEPDC1B-205ENST00000512078 IFT172Q9UG01 1749 aa12.07□□□□□ -0.48
DEPDC1B-205ENST00000512078 RRBP1Q9P2E9 1410 aaKnown RBP12.07□□□□□ -0.48
DEPDC1B-205ENST00000512078 KNDC1Q76NI1 1749 aa12.06□□□□□ -0.48
DEPDC1B-205ENST00000512078 SBNO1A3KN83 1393 aa12.06□□□□□ -0.48
DEPDC1B-205ENST00000512078 ARHGEF10O15013 1369 aa12.06□□□□□ -0.48
DEPDC1B-205ENST00000512078 PPLO60437 1756 aa12.05□□□□□ -0.48
DEPDC1B-205ENST00000512078 BTG4Q9NY30 223 aa12.05□□□□□ -0.48
DEPDC1B-205ENST00000512078 NUTM2FA1L443 756 aa12.05□□□□□ -0.48
DEPDC1B-205ENST00000512078 NUP155O75694 1391 aa12.04□□□□□ -0.48
DEPDC1B-205ENST00000512078 CRYBG1Q9Y4K1 1723 aa12.04□□□□□ -0.48
DEPDC1B-205ENST00000512078 TECPR2O15040 1411 aa12.04□□□□□ -0.48
DEPDC1B-205ENST00000512078 GIGYF1O75420 1035 aaPredicted RBP12.03□□□□□ -0.48
DEPDC1B-205ENST00000512078 PSME1Q06323 249 aa12.03□□□□□ -0.48
DEPDC1B-205ENST00000512078 TRPM3Q9HCF6 1732 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms