RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 ADGRB1O14514 1584 aa16.9■□□□□ 0.3
SH3RF1-205ENST00000511421 CDC42BPGQ6DT37 1551 aa16.88■□□□□ 0.29
SH3RF1-205ENST00000511421 ORAI2Q96SN7 254 aa16.88■□□□□ 0.29
SH3RF1-205ENST00000511421 DDX17Q92841 729 aaKnown RBP16.88■□□□□ 0.29
SH3RF1-205ENST00000511421 SIN3AQ96ST3 1273 aa16.87■□□□□ 0.29
SH3RF1-205ENST00000511421 DLC1Q96QB1 1528 aa16.86■□□□□ 0.29
SH3RF1-205ENST00000511421 PRAM1Q96QH2 718 aa16.86■□□□□ 0.29
SH3RF1-205ENST00000511421 NHSL1Q5SYE7 1610 aa16.86■□□□□ 0.29
SH3RF1-205ENST00000511421 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
SH3RF1-205ENST00000511421 TRAK1Q9UPV9 953 aa16.85■□□□□ 0.29
SH3RF1-205ENST00000511421 SAFB2Q14151 953 aaKnown RBP eCLIP16.84■□□□□ 0.29
SH3RF1-205ENST00000511421 RGS17Q9UGC6 210 aaPredicted RBP16.84■□□□□ 0.29
SH3RF1-205ENST00000511421 L3MBTL2Q969R5 705 aa16.83■□□□□ 0.28
SH3RF1-205ENST00000511421 SPATA31A6Q5VVP1 1343 aa16.82■□□□□ 0.28
SH3RF1-205ENST00000511421 NUTM2FA1L443 756 aa16.82■□□□□ 0.28
SH3RF1-205ENST00000511421 ESCO1Q5FWF5 840 aa16.82■□□□□ 0.28
SH3RF1-205ENST00000511421 LRRC59Q96AG4 307 aaKnown RBP16.82■□□□□ 0.28
SH3RF1-205ENST00000511421 POGKQ9P215 609 aa16.82■□□□□ 0.28
SH3RF1-205ENST00000511421 SOS2Q07890 1332 aaPredicted RBP16.82■□□□□ 0.28
SH3RF1-205ENST00000511421 SHPRHQ149N8 1683 aa16.8■□□□□ 0.28
SH3RF1-205ENST00000511421 NEUROD1Q13562 356 aa16.8■□□□□ 0.28
SH3RF1-205ENST00000511421 LRP6O75581 1613 aa16.79■□□□□ 0.28
SH3RF1-205ENST00000511421 FMN2Q9NZ56 1722 aa16.79■□□□□ 0.28
SH3RF1-205ENST00000511421 NBPF1Q3BBV0 1214 aa16.79■□□□□ 0.28
SH3RF1-205ENST00000511421 PNPLA6Q8IY17 1366 aa16.78■□□□□ 0.28
SH3RF1-205ENST00000511421 FOXO3O43524 673 aa16.78■□□□□ 0.28
SH3RF1-205ENST00000511421 NPHP3Q7Z494 1330 aa16.77■□□□□ 0.28
SH3RF1-205ENST00000511421 KIAA1210Q9ULL0 1709 aa16.77■□□□□ 0.28
SH3RF1-205ENST00000511421 MINK1Q8N4C8 1332 aaPredicted RBP16.77■□□□□ 0.27
SH3RF1-205ENST00000511421 HIRIP3Q9BW71 556 aaPredicted RBP16.76■□□□□ 0.27
SH3RF1-205ENST00000511421 ADGRB2O60241 1585 aa16.76■□□□□ 0.27
SH3RF1-205ENST00000511421 PXDNQ92626 1479 aa16.75■□□□□ 0.27
SH3RF1-205ENST00000511421 NUTM2BA6NNL0 878 aaPredicted RBP16.74■□□□□ 0.27
SH3RF1-205ENST00000511421 NUTM2EB1AL46 878 aaPredicted RBP16.74■□□□□ 0.27
SH3RF1-205ENST00000511421 SOCS7O14512 581 aa16.74■□□□□ 0.27
SH3RF1-205ENST00000511421 XPCQ01831 940 aaPredicted RBP16.74■□□□□ 0.27
SH3RF1-205ENST00000511421 POTEAQ6S8J7 498 aa16.74■□□□□ 0.27
SH3RF1-205ENST00000511421 NUTM2AQ8IVF1 878 aaPredicted RBP16.74■□□□□ 0.27
SH3RF1-205ENST00000511421 ANKARQ7Z5J8 1434 aa16.73■□□□□ 0.27
SH3RF1-205ENST00000511421 ARHGEF28Q8N1W1 1705 aaKnown RBP16.73■□□□□ 0.27
SH3RF1-205ENST00000511421 WASLO00401 505 aaPredicted RBP16.73■□□□□ 0.27
SH3RF1-205ENST00000511421 PHF8Q9UPP1 1060 aa16.73■□□□□ 0.27
SH3RF1-205ENST00000511421 MEX3CQ5U5Q3 659 aaKnown RBP16.72■□□□□ 0.27
SH3RF1-205ENST00000511421 PRR36Q9H6K5 1346 aa16.72■□□□□ 0.27
SH3RF1-205ENST00000511421 USP32Q8NFA0 1604 aa16.7■□□□□ 0.26
SH3RF1-205ENST00000511421 KIF1AQ12756 1690 aa16.7■□□□□ 0.26
SH3RF1-205ENST00000511421 RGPD8O14715 1765 aaPredicted RBP16.7■□□□□ 0.26
SH3RF1-205ENST00000511421 EIF3AQ14152 1382 aaKnown RBP16.69■□□□□ 0.26
SH3RF1-205ENST00000511421 KRT28Q7Z3Y7 464 aa16.69■□□□□ 0.26
SH3RF1-205ENST00000511421 TULP4Q9NRJ4 1543 aa16.69■□□□□ 0.26
SH3RF1-205ENST00000511421 NBPF8Q3BBV2 869 aa16.69■□□□□ 0.26
SH3RF1-205ENST00000511421 SPATA31A3Q5VYP0 1347 aa16.68■□□□□ 0.26
SH3RF1-205ENST00000511421 PMFBP1Q8TBY8 1022 aa16.68■□□□□ 0.26
SH3RF1-205ENST00000511421 TRPM1Q7Z4N2 1603 aa16.66■□□□□ 0.26
SH3RF1-205ENST00000511421 COL22A1Q8NFW1 1626 aaPredicted RBP16.66■□□□□ 0.26
SH3RF1-205ENST00000511421 CDK19Q9BWU1 502 aa16.66■□□□□ 0.26
SH3RF1-205ENST00000511421 CENPJQ9HC77 1338 aaPredicted RBP16.66■□□□□ 0.26
SH3RF1-205ENST00000511421 ADAMTS2O95450 1211 aa16.65■□□□□ 0.26
SH3RF1-205ENST00000511421 ZNF772Q68DY9 489 aaPredicted RBP16.65■□□□□ 0.26
SH3RF1-205ENST00000511421 NUDT16Q96DE0 195 aaKnown RBP16.65■□□□□ 0.26
SH3RF1-205ENST00000511421 PSME1Q06323 249 aa16.65■□□□□ 0.26
SH3RF1-205ENST00000511421 SBNO1A3KN83 1393 aa16.64■□□□□ 0.25
SH3RF1-205ENST00000511421 ROCK2O75116 1388 aaKnown RBP16.64■□□□□ 0.25
SH3RF1-205ENST00000511421 TONSLQ96HA7 1378 aa16.64■□□□□ 0.25
SH3RF1-205ENST00000511421 AFF2P51816 1311 aa16.64■□□□□ 0.25
SH3RF1-205ENST00000511421 ATP7BP35670 1465 aa16.64■□□□□ 0.25
SH3RF1-205ENST00000511421 C8orf37Q96NL8 207 aa16.64■□□□□ 0.25
SH3RF1-205ENST00000511421 GPRASP1Q5JY77 1395 aa16.63■□□□□ 0.25
SH3RF1-205ENST00000511421 TNS3Q68CZ2 1445 aa16.62■□□□□ 0.25
SH3RF1-205ENST00000511421 PCGF6Q9BYE7 350 aa16.62■□□□□ 0.25
SH3RF1-205ENST00000511421 NGLY1Q96IV0 654 aa16.61■□□□□ 0.25
SH3RF1-205ENST00000511421 NGDNQ8NEJ9 315 aaKnown RBP16.6■□□□□ 0.25
SH3RF1-205ENST00000511421 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
SH3RF1-205ENST00000511421 FNBP4Q8N3X1 1017 aaPredicted RBP16.59■□□□□ 0.25
SH3RF1-205ENST00000511421 ARHGEF10O15013 1369 aa16.58■□□□□ 0.24
SH3RF1-205ENST00000511421 PLEKHG3A1L390 1219 aa16.58■□□□□ 0.24
SH3RF1-205ENST00000511421 CABP2Q9NPB3 220 aa16.58■□□□□ 0.24
SH3RF1-205ENST00000511421 RALGAPBQ86X10 1494 aa16.57■□□□□ 0.24
SH3RF1-205ENST00000511421 QRICH2Q9H0J4 1663 aa16.57■□□□□ 0.24
SH3RF1-205ENST00000511421 SRPK2P78362 688 aaKnown RBP16.57■□□□□ 0.24
SH3RF1-205ENST00000511421 LMOD2Q6P5Q4 547 aa16.57■□□□□ 0.24
SH3RF1-205ENST00000511421 CABLES1Q8TDN4 633 aa16.57■□□□□ 0.24
SH3RF1-205ENST00000511421 TRPM3Q9HCF6 1732 aaPredicted RBP16.57■□□□□ 0.24
SH3RF1-205ENST00000511421 POLR3AO14802 1390 aaPredicted RBP16.57■□□□□ 0.24
SH3RF1-205ENST00000511421 CARD11Q9BXL7 1154 aa16.56■□□□□ 0.24
SH3RF1-205ENST00000511421 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
SH3RF1-205ENST00000511421 ITSN1Q15811 1721 aa16.56■□□□□ 0.24
SH3RF1-205ENST00000511421 RXRBP28702 533 aa16.56■□□□□ 0.24
SH3RF1-205ENST00000511421 USP21Q9UK80 565 aa16.56■□□□□ 0.24
SH3RF1-205ENST00000511421 TOPAZ1Q8N9V7 1692 aa16.55■□□□□ 0.24
SH3RF1-205ENST00000511421 ACEP12821 1306 aa16.55■□□□□ 0.24
SH3RF1-205ENST00000511421 EVC2Q86UK5 1308 aa16.54■□□□□ 0.24
SH3RF1-205ENST00000511421 CLSPNQ9HAW4 1339 aa16.53■□□□□ 0.24
SH3RF1-205ENST00000511421 ALS2Q96Q42 1657 aa16.53■□□□□ 0.24
SH3RF1-205ENST00000511421 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
SH3RF1-205ENST00000511421 BCL9LQ86UU0 1499 aa16.53■□□□□ 0.24
SH3RF1-205ENST00000511421 PLEKHG5O94827 1062 aa16.53■□□□□ 0.24
SH3RF1-205ENST00000511421 RBM6P78332 1123 aaKnown RBP16.53■□□□□ 0.24
SH3RF1-205ENST00000511421 MARF1Q9Y4F3 1742 aaKnown RBP16.52■□□□□ 0.23
SH3RF1-205ENST00000511421 PAK3O75914 559 aaPredicted RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms