RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 USP46P62068 366 aa11.47□□□□□ -0.57
GYPB-212ENST00000511198 BRICD5Q6PL45 260 aa11.47□□□□□ -0.57
GYPB-212ENST00000511198 PRKD2Q9BZL6 878 aa11.47□□□□□ -0.57
GYPB-212ENST00000511198 SLC6A16Q9GZN6 736 aa11.47□□□□□ -0.57
GYPB-212ENST00000511198 LAMC3Q9Y6N6 1575 aa11.46□□□□□ -0.57
GYPB-212ENST00000511198 DCAF1Q9Y4B6 1507 aa11.46□□□□□ -0.57
GYPB-212ENST00000511198 HOXA2O43364 376 aa11.46□□□□□ -0.57
GYPB-212ENST00000511198 FMNL1O95466 1100 aaPredicted RBP11.46□□□□□ -0.57
GYPB-212ENST00000511198 RNF19BQ6ZMZ0 732 aa11.46□□□□□ -0.57
GYPB-212ENST00000511198 FAM160A2Q8N612 972 aaPredicted RBP11.46□□□□□ -0.57
GYPB-212ENST00000511198 EMID1Q96A84 441 aaPredicted RBP11.45□□□□□ -0.58
GYPB-212ENST00000511198 V9GY48 417 aaPredicted RBP11.45□□□□□ -0.58
GYPB-212ENST00000511198 ATAD2BQ9ULI0 1458 aa11.44□□□□□ -0.58
GYPB-212ENST00000511198 PDS5BQ9NTI5 1447 aa11.44□□□□□ -0.58
GYPB-212ENST00000511198 ANKLE1Q8NAG6 615 aa11.44□□□□□ -0.58
GYPB-212ENST00000511198 WDR62O43379 1518 aa11.43□□□□□ -0.58
GYPB-212ENST00000511198 ARAP1Q96P48 1450 aa11.43□□□□□ -0.58
GYPB-212ENST00000511198 MS4A1P11836 297 aa11.42□□□□□ -0.58
GYPB-212ENST00000511198 GUCA2AQ02747 115 aa11.42□□□□□ -0.58
GYPB-212ENST00000511198 PDE4DQ08499 809 aa11.42□□□□□ -0.58
GYPB-212ENST00000511198 NUTM1Q86Y26 1132 aa11.42□□□□□ -0.58
GYPB-212ENST00000511198 SPIRE2Q8WWL2 714 aa11.42□□□□□ -0.58
GYPB-212ENST00000511198 MRC2Q9UBG0 1479 aa11.41□□□□□ -0.58
GYPB-212ENST00000511198 Q3C1V9 767 aa11.41□□□□□ -0.58
GYPB-212ENST00000511198 IRX2Q9BZI1 471 aaPredicted RBP11.41□□□□□ -0.58
GYPB-212ENST00000511198 BEGAINQ9BUH8 593 aa11.4□□□□□ -0.58
GYPB-212ENST00000511198 MSS51Q4VC12 460 aa11.39□□□□□ -0.59
GYPB-212ENST00000511198 PLA2G2CQ5R387 149 aa11.39□□□□□ -0.59
GYPB-212ENST00000511198 PRDM9Q9NQV7 894 aa11.39□□□□□ -0.59
GYPB-212ENST00000511198 HMGXB3Q12766 1538 aa11.37□□□□□ -0.59
GYPB-212ENST00000511198 SLC19A1P41440 591 aa11.37□□□□□ -0.59
GYPB-212ENST00000511198 LIAT1Q6ZQX7 453 aa11.37□□□□□ -0.59
GYPB-212ENST00000511198 ZCCHC6Q5VYS8 1495 aaKnown RBP11.37□□□□□ -0.59
GYPB-212ENST00000511198 USB1Q9BQ65 265 aaKnown RBP11.36□□□□□ -0.59
GYPB-212ENST00000511198 PCDHGC3Q9UN70 934 aa11.36□□□□□ -0.59
GYPB-212ENST00000511198 MOXD2PA6NHM9 499 aa11.35□□□□□ -0.59
GYPB-212ENST00000511198 NDUFV2P19404 249 aa11.35□□□□□ -0.59
GYPB-212ENST00000511198 FDX1P10109 184 aa11.34□□□□□ -0.59
GYPB-212ENST00000511198 SYMPKQ92797 1274 aaKnown RBP11.34□□□□□ -0.59
GYPB-212ENST00000511198 MMP16P51512 607 aa11.33□□□□□ -0.6
GYPB-212ENST00000511198 SPRYD7Q5W111 196 aa11.33□□□□□ -0.6
GYPB-212ENST00000511198 TBC1D2Q9BYX2 928 aa11.33□□□□□ -0.6
GYPB-212ENST00000511198 FCF1Q9Y324 198 aaKnown RBP11.33□□□□□ -0.6
GYPB-212ENST00000511198 DXOO77932 396 aaKnown RBP11.31□□□□□ -0.6
GYPB-212ENST00000511198 GFRA3O60609 400 aa11.29□□□□□ -0.6
GYPB-212ENST00000511198 DIXDC1Q155Q3 683 aa11.29□□□□□ -0.6
GYPB-212ENST00000511198 TRIM67Q6ZTA4 783 aa11.29□□□□□ -0.6
GYPB-212ENST00000511198 ZNF598Q86UK7 904 aaKnown RBP11.29□□□□□ -0.6
GYPB-212ENST00000511198 GJA5P36382 358 aa11.28□□□□□ -0.6
GYPB-212ENST00000511198 RETREG3Q86VR2 466 aa11.28□□□□□ -0.6
GYPB-212ENST00000511198 RSBN1LQ6PCB5 846 aaPredicted RBP11.27□□□□□ -0.61
GYPB-212ENST00000511198 C6orf229H3BNL8 230 aa11.26□□□□□ -0.61
GYPB-212ENST00000511198 RPIAP49247 311 aa11.26□□□□□ -0.61
GYPB-212ENST00000511198 LAPTM4AQ15012 233 aa11.26□□□□□ -0.61
GYPB-212ENST00000511198 SPTLC1O15269 473 aa11.25□□□□□ -0.61
GYPB-212ENST00000511198 ZNF697Q5TEC3 545 aa11.25□□□□□ -0.61
GYPB-212ENST00000511198 PDZRN3Q9UPQ7 1066 aa11.25□□□□□ -0.61
GYPB-212ENST00000511198 PCDHB15Q9Y5E8 787 aa11.25□□□□□ -0.61
GYPB-212ENST00000511198 JUNDP17535 347 aa11.24□□□□□ -0.61
GYPB-212ENST00000511198 NRG2O14511 850 aaPredicted RBP11.23□□□□□ -0.61
GYPB-212ENST00000511198 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
GYPB-212ENST00000511198 RIC3Q7Z5B4 369 aa11.23□□□□□ -0.61
GYPB-212ENST00000511198 GPBP1L1Q9HC44 474 aaPredicted RBP11.23□□□□□ -0.61
GYPB-212ENST00000511198 SOCS7O14512 581 aa11.22□□□□□ -0.61
GYPB-212ENST00000511198 GDF9O60383 454 aa11.22□□□□□ -0.61
GYPB-212ENST00000511198 MTMR2Q13614 643 aa11.22□□□□□ -0.61
GYPB-212ENST00000511198 LMTK3Q96Q04 1460 aa11.21□□□□□ -0.61
GYPB-212ENST00000511198 BAZ1BQ9UIG0 1483 aaKnown RBP11.21□□□□□ -0.61
GYPB-212ENST00000511198 CADPSQ9ULU8 1353 aa11.21□□□□□ -0.61
GYPB-212ENST00000511198 FBXO41Q8TF61 875 aa11.21□□□□□ -0.61
GYPB-212ENST00000511198 KDM4CQ9H3R0 1056 aa11.21□□□□□ -0.61
GYPB-212ENST00000511198 SPDYE5A6NIY4 337 aa11.2□□□□□ -0.62
GYPB-212ENST00000511198 CD2BP2O95400 341 aaKnown RBP11.2□□□□□ -0.62
GYPB-212ENST00000511198 PRR20EP86478 221 aa11.2□□□□□ -0.62
GYPB-212ENST00000511198 PRR20CP86479 221 aa11.2□□□□□ -0.62
GYPB-212ENST00000511198 PRR20DP86480 221 aa11.2□□□□□ -0.62
GYPB-212ENST00000511198 PRR20BP86481 221 aa11.2□□□□□ -0.62
GYPB-212ENST00000511198 PRR20AP86496 221 aa11.2□□□□□ -0.62
GYPB-212ENST00000511198 Q6ZNB5 142 aa11.2□□□□□ -0.62
GYPB-212ENST00000511198 PRR7Q8TB68 274 aa11.2□□□□□ -0.62
GYPB-212ENST00000511198 LIMD1Q9UGP4 676 aa11.2□□□□□ -0.62
GYPB-212ENST00000511198 PKD2L1Q9P0L9 805 aa11.19□□□□□ -0.62
GYPB-212ENST00000511198 LCE2BO14633 110 aa11.18□□□□□ -0.62
GYPB-212ENST00000511198 ZBTB24O43167 697 aaPredicted RBP11.18□□□□□ -0.62
GYPB-212ENST00000511198 HRCP23327 699 aa11.18□□□□□ -0.62
GYPB-212ENST00000511198 ILDR2Q71H61 639 aa11.18□□□□□ -0.62
GYPB-212ENST00000511198 CCDC24Q8N4L8 307 aa11.18□□□□□ -0.62
GYPB-212ENST00000511198 TUSC1Q2TAM9 212 aa11.17□□□□□ -0.62
GYPB-212ENST00000511198 PRPF38BQ5VTL8 546 aaKnown RBP11.17□□□□□ -0.62
GYPB-212ENST00000511198 TNFRSF10AO00220 468 aa11.16□□□□□ -0.62
GYPB-212ENST00000511198 TRIM32Q13049 653 aa11.16□□□□□ -0.62
GYPB-212ENST00000511198 DESI1Q6ICB0 168 aa11.16□□□□□ -0.62
GYPB-212ENST00000511198 CABLES1Q8TDN4 633 aa11.16□□□□□ -0.62
GYPB-212ENST00000511198 NUDT12Q9BQG2 462 aa11.16□□□□□ -0.62
GYPB-212ENST00000511198 FAM117AQ9C073 453 aa11.16□□□□□ -0.62
GYPB-212ENST00000511198 ZBTB3Q9H5J0 574 aa11.16□□□□□ -0.62
GYPB-212ENST00000511198 RSF1Q96T23 1441 aaPredicted RBP11.16□□□□□ -0.62
GYPB-212ENST00000511198 SMARCA4P51532 1647 aa11.16□□□□□ -0.62
GYPB-212ENST00000511198 CEP164Q9UPV0 1460 aa11.15□□□□□ -0.62
GYPB-212ENST00000511198 CFAP99D6REC4 459 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms