RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 FOXC1Q12948 553 aa11.89□□□□□ -0.51
LINC01088-205ENST00000509088 LMOD2Q6P5Q4 547 aa11.89□□□□□ -0.51
LINC01088-205ENST00000509088 GPCPD1Q9NPB8 672 aa11.89□□□□□ -0.51
LINC01088-205ENST00000509088 GUCA2AQ02747 115 aa11.88□□□□□ -0.51
LINC01088-205ENST00000509088 Q3C1V9 767 aa11.88□□□□□ -0.51
LINC01088-205ENST00000509088 TOR4AQ9NXH8 423 aa11.88□□□□□ -0.51
LINC01088-205ENST00000509088 POTECB2RU33 542 aa11.87□□□□□ -0.51
LINC01088-205ENST00000509088 DXOO77932 396 aaKnown RBP11.87□□□□□ -0.51
LINC01088-205ENST00000509088 CLCN1P35523 988 aa11.86□□□□□ -0.51
LINC01088-205ENST00000509088 USP46P62068 366 aa11.86□□□□□ -0.51
LINC01088-205ENST00000509088 USB1Q9BQ65 265 aaKnown RBP11.86□□□□□ -0.51
LINC01088-205ENST00000509088 ST8SIA5O15466 376 aa11.85□□□□□ -0.51
LINC01088-205ENST00000509088 CD2BP2O95400 341 aaKnown RBP11.84□□□□□ -0.51
LINC01088-205ENST00000509088 AAASQ9NRG9 546 aa11.84□□□□□ -0.51
LINC01088-205ENST00000509088 SYMPKQ92797 1274 aaKnown RBP11.82□□□□□ -0.52
LINC01088-205ENST00000509088 ZMYND10O75800 440 aa11.81□□□□□ -0.52
LINC01088-205ENST00000509088 TRIM32Q13049 653 aa11.81□□□□□ -0.52
LINC01088-205ENST00000509088 BARGINQ6ZT62 677 aa11.81□□□□□ -0.52
LINC01088-205ENST00000509088 AVPP01185 164 aa11.8□□□□□ -0.52
LINC01088-205ENST00000509088 ZNF775Q96BV0 537 aaPredicted RBP11.8□□□□□ -0.52
LINC01088-205ENST00000509088 CRIPAKQ8N1N5 446 aa11.79□□□□□ -0.52
LINC01088-205ENST00000509088 ZC3H15Q8WU90 426 aaKnown RBP11.78□□□□□ -0.52
LINC01088-205ENST00000509088 PCDHGC3Q9UN70 934 aa11.78□□□□□ -0.52
LINC01088-205ENST00000509088 WNT7AO00755 349 aa11.77□□□□□ -0.53
LINC01088-205ENST00000509088 ZBTB24O43167 697 aaPredicted RBP11.77□□□□□ -0.53
LINC01088-205ENST00000509088 DACH1Q9UI36 760 aa11.77□□□□□ -0.53
LINC01088-205ENST00000509088 CYP4X1Q8N118 509 aa11.76□□□□□ -0.53
LINC01088-205ENST00000509088 JUNDP17535 347 aa11.75□□□□□ -0.53
LINC01088-205ENST00000509088 SSTR3P32745 418 aaPredicted RBP11.75□□□□□ -0.53
LINC01088-205ENST00000509088 AMHR2Q16671 573 aa11.75□□□□□ -0.53
LINC01088-205ENST00000509088 SKOR1P84550 965 aa11.74□□□□□ -0.53
LINC01088-205ENST00000509088 SMPD1P17405 629 aa11.73□□□□□ -0.53
LINC01088-205ENST00000509088 NUTM1Q86Y26 1132 aa11.73□□□□□ -0.53
LINC01088-205ENST00000509088 SPIRE2Q8WWL2 714 aa11.73□□□□□ -0.53
LINC01088-205ENST00000509088 MRGPRX2Q96LB1 330 aa11.73□□□□□ -0.53
LINC01088-205ENST00000509088 FDX1P10109 184 aa11.72□□□□□ -0.53
LINC01088-205ENST00000509088 RETREG3Q86VR2 466 aa11.72□□□□□ -0.53
LINC01088-205ENST00000509088 CCDC24Q8N4L8 307 aa11.71□□□□□ -0.53
LINC01088-205ENST00000509088 KRI1Q8N9T8 703 aaKnown RBP11.71□□□□□ -0.53
LINC01088-205ENST00000509088 SMCPP49901 116 aaPredicted RBP11.7□□□□□ -0.54
LINC01088-205ENST00000509088 PTCRAQ6ISU1 281 aaPredicted RBP11.7□□□□□ -0.54
LINC01088-205ENST00000509088 GIGYF2Q6Y7W6 1299 aaKnown RBP11.7□□□□□ -0.54
LINC01088-205ENST00000509088 J3QL48 77 aa11.69□□□□□ -0.54
LINC01088-205ENST00000509088 NDUFV2P19404 249 aa11.69□□□□□ -0.54
LINC01088-205ENST00000509088 SNIP1Q8TAD8 396 aaKnown RBP11.69□□□□□ -0.54
LINC01088-205ENST00000509088 TTC24A2A3L6 582 aaPredicted RBP11.68□□□□□ -0.54
LINC01088-205ENST00000509088 MOXD2PA6NHM9 499 aa11.68□□□□□ -0.54
LINC01088-205ENST00000509088 TTLL12Q14166 644 aaPredicted RBP11.68□□□□□ -0.54
LINC01088-205ENST00000509088 AXIN1O15169 862 aa11.67□□□□□ -0.54
LINC01088-205ENST00000509088 CTC1Q2NKJ3 1217 aa11.67□□□□□ -0.54
LINC01088-205ENST00000509088 WNT7BP56706 349 aa11.66□□□□□ -0.54
LINC01088-205ENST00000509088 RC3H1Q5TC82 1133 aaKnown RBP11.66□□□□□ -0.54
LINC01088-205ENST00000509088 PARP9Q8IXQ6 854 aa11.66□□□□□ -0.54
LINC01088-205ENST00000509088 NUDT12Q9BQG2 462 aa11.66□□□□□ -0.54
LINC01088-205ENST00000509088 GMPR2Q9P2T1 348 aaKnown RBP11.66□□□□□ -0.54
LINC01088-205ENST00000509088 C6orf229H3BNL8 230 aa11.64□□□□□ -0.55
LINC01088-205ENST00000509088 LCE2AQ5TA79 106 aaPredicted RBP11.64□□□□□ -0.55
LINC01088-205ENST00000509088 TRIM66O15016 1216 aa11.63□□□□□ -0.55
LINC01088-205ENST00000509088 MS4A1P11836 297 aa11.63□□□□□ -0.55
LINC01088-205ENST00000509088 BEGAINQ9BUH8 593 aa11.63□□□□□ -0.55
LINC01088-205ENST00000509088 HPS1Q92902 700 aa11.62□□□□□ -0.55
LINC01088-205ENST00000509088 SIAH2O43255 324 aa11.61□□□□□ -0.55
LINC01088-205ENST00000509088 CCNYL3P0C7X3 344 aa11.59□□□□□ -0.55
LINC01088-205ENST00000509088 PTPRNQ16849 979 aa11.59□□□□□ -0.55
LINC01088-205ENST00000509088 TBC1D2Q9BYX2 928 aa11.59□□□□□ -0.55
LINC01088-205ENST00000509088 RSBN1LQ6PCB5 846 aaPredicted RBP11.58□□□□□ -0.56
LINC01088-205ENST00000509088 PRR7Q8TB68 274 aa11.58□□□□□ -0.56
LINC01088-205ENST00000509088 SH3BP2P78314 561 aa11.57□□□□□ -0.56
LINC01088-205ENST00000509088 MTMR2Q13614 643 aa11.57□□□□□ -0.56
LINC01088-205ENST00000509088 ATP13A2Q9NQ11 1180 aa11.57□□□□□ -0.56
LINC01088-205ENST00000509088 EVA1BQ9NVM1 165 aa11.57□□□□□ -0.56
LINC01088-205ENST00000509088 PCDHB15Q9Y5E8 787 aa11.57□□□□□ -0.56
LINC01088-205ENST00000509088 GJA5P36382 358 aa11.56□□□□□ -0.56
LINC01088-205ENST00000509088 DESI1Q6ICB0 168 aa11.55□□□□□ -0.56
LINC01088-205ENST00000509088 AK7Q96M32 723 aa11.55□□□□□ -0.56
LINC01088-205ENST00000509088 UNC93B1Q9H1C4 597 aa11.55□□□□□ -0.56
LINC01088-205ENST00000509088 C11orf95C9JLR9 678 aaPredicted RBP11.54□□□□□ -0.56
LINC01088-205ENST00000509088 TREML4Q6UXN2 200 aa11.54□□□□□ -0.56
LINC01088-205ENST00000509088 CFAP99D6REC4 459 aa11.53□□□□□ -0.56
LINC01088-205ENST00000509088 SPTLC1O15269 473 aa11.53□□□□□ -0.56
LINC01088-205ENST00000509088 ALDH1A1P00352 501 aa11.53□□□□□ -0.56
LINC01088-205ENST00000509088 KCNH2Q12809 1159 aa11.53□□□□□ -0.56
LINC01088-205ENST00000509088 SPDYE5A6NIY4 337 aa11.52□□□□□ -0.57
LINC01088-205ENST00000509088 SNRPBP14678 240 aaKnown RBP11.52□□□□□ -0.57
LINC01088-205ENST00000509088 EHBP1Q8NDI1 1231 aa11.52□□□□□ -0.57
LINC01088-205ENST00000509088 LINC01559Q495D7 138 aa11.51□□□□□ -0.57
LINC01088-205ENST00000509088 HRCP23327 699 aa11.5□□□□□ -0.57
LINC01088-205ENST00000509088 BAP1Q92560 729 aa11.5□□□□□ -0.57
LINC01088-205ENST00000509088 LCE2CQ5TA81 110 aa11.49□□□□□ -0.57
LINC01088-205ENST00000509088 LYPD8Q6UX82 237 aa11.49□□□□□ -0.57
LINC01088-205ENST00000509088 TRIM47Q96LD4 638 aa11.49□□□□□ -0.57
LINC01088-205ENST00000509088 PDE4DQ08499 809 aa11.48□□□□□ -0.57
LINC01088-205ENST00000509088 NFX1Q12986 1120 aaKnown RBP11.48□□□□□ -0.57
LINC01088-205ENST00000509088 ZNF511Q8NB15 262 aa11.48□□□□□ -0.57
LINC01088-205ENST00000509088 CABLES1Q8TDN4 633 aa11.48□□□□□ -0.57
LINC01088-205ENST00000509088 F12P00748 615 aaPredicted RBP11.47□□□□□ -0.57
LINC01088-205ENST00000509088 DIXDC1Q155Q3 683 aa11.47□□□□□ -0.57
LINC01088-205ENST00000509088 RIC3Q7Z5B4 369 aa11.47□□□□□ -0.57
LINC01088-205ENST00000509088 LIMD1Q9UGP4 676 aa11.47□□□□□ -0.57
LINC01088-205ENST00000509088 TLL2Q9Y6L7 1015 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms