RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 PARP9Q8IXQ6 854 aa6.2□□□□□ -1.42
HMGN1P11-201ENST00000508668 GPBP1L1Q9HC44 474 aaPredicted RBP6.2□□□□□ -1.42
HMGN1P11-201ENST00000508668 PLB1Q6P1J6 1458 aa6.2□□□□□ -1.42
HMGN1P11-201ENST00000508668 RAPGEF2Q9Y4G8 1499 aa6.2□□□□□ -1.42
HMGN1P11-201ENST00000508668 KDM6BO15054 1643 aa6.19□□□□□ -1.42
HMGN1P11-201ENST00000508668 GPCPD1Q9NPB8 672 aa6.19□□□□□ -1.42
HMGN1P11-201ENST00000508668 GOLGA3Q08378 1498 aa6.19□□□□□ -1.42
HMGN1P11-201ENST00000508668 UACAQ9BZF9 1416 aa6.18□□□□□ -1.42
HMGN1P11-201ENST00000508668 TEX14Q8IWB6 1497 aa6.18□□□□□ -1.42
HMGN1P11-201ENST00000508668 GOLGA8CPA6NN73 597 aa6.18□□□□□ -1.42
HMGN1P11-201ENST00000508668 CLCN1P35523 988 aa6.18□□□□□ -1.42
HMGN1P11-201ENST00000508668 GIGYF2Q6Y7W6 1299 aaKnown RBP6.18□□□□□ -1.42
HMGN1P11-201ENST00000508668 LAPTM4BQ86VI4 370 aa6.18□□□□□ -1.42
HMGN1P11-201ENST00000508668 ZFRQ96KR1 1074 aaKnown RBP6.18□□□□□ -1.42
HMGN1P11-201ENST00000508668 REPIN1Q9BWE0 567 aaKnown RBP6.18□□□□□ -1.42
HMGN1P11-201ENST00000508668 TMEM134Q9H6X4 195 aa6.18□□□□□ -1.42
HMGN1P11-201ENST00000508668 TSPOAP1O95153 1857 aa6.17□□□□□ -1.42
HMGN1P11-201ENST00000508668 ABCC2Q92887 1545 aa6.17□□□□□ -1.42
HMGN1P11-201ENST00000508668 RNF40O75150 1001 aa6.17□□□□□ -1.42
HMGN1P11-201ENST00000508668 RANGAP1P46060 587 aaPredicted RBP6.17□□□□□ -1.42
HMGN1P11-201ENST00000508668 HDGFP51858 240 aaKnown RBP6.17□□□□□ -1.42
HMGN1P11-201ENST00000508668 SWT1Q5T5J6 900 aaKnown RBP6.17□□□□□ -1.42
HMGN1P11-201ENST00000508668 SAMD7Q7Z3H4 446 aa6.17□□□□□ -1.42
HMGN1P11-201ENST00000508668 KDM4CQ9H3R0 1056 aa6.17□□□□□ -1.42
HMGN1P11-201ENST00000508668 PLA2G2EQ9NZK7 142 aa6.17□□□□□ -1.42
HMGN1P11-201ENST00000508668 ADCY10Q96PN6 1610 aa6.17□□□□□ -1.42
HMGN1P11-201ENST00000508668 ASXL2Q76L83 1435 aa6.16□□□□□ -1.42
HMGN1P11-201ENST00000508668 KIF13AQ9H1H9 1805 aa6.16□□□□□ -1.42
HMGN1P11-201ENST00000508668 DIP2BQ9P265 1576 aa6.16□□□□□ -1.42
HMGN1P11-201ENST00000508668 DAXXQ9UER7 740 aaPredicted RBP6.16□□□□□ -1.42
HMGN1P11-201ENST00000508668 DDX11L8A8MPP1 907 aa6.15□□□□□ -1.42
HMGN1P11-201ENST00000508668 TMUB1Q9BVT8 246 aa6.15□□□□□ -1.42
HMGN1P11-201ENST00000508668 ARID3CA6NKF2 412 aa6.14□□□□□ -1.43
HMGN1P11-201ENST00000508668 MS4A1P11836 297 aa6.14□□□□□ -1.43
HMGN1P11-201ENST00000508668 SSTR3P32745 418 aaPredicted RBP6.14□□□□□ -1.43
HMGN1P11-201ENST00000508668 ANKK1Q8NFD2 765 aa6.14□□□□□ -1.43
HMGN1P11-201ENST00000508668 WNT2BQ93097 391 aa6.14□□□□□ -1.43
HMGN1P11-201ENST00000508668 LRCH3Q96II8 777 aa6.14□□□□□ -1.43
HMGN1P11-201ENST00000508668 FAM217BQ9NTX9 383 aaPredicted RBP6.14□□□□□ -1.43
HMGN1P11-201ENST00000508668 UHRF1BP1LA0JNW5 1464 aa6.14□□□□□ -1.43
HMGN1P11-201ENST00000508668 SLC4A3P48751 1232 aa6.13□□□□□ -1.43
HMGN1P11-201ENST00000508668 SULF1Q8IWU6 871 aa6.13□□□□□ -1.43
HMGN1P11-201ENST00000508668 RDH13Q8NBN7 331 aa6.13□□□□□ -1.43
HMGN1P11-201ENST00000508668 KCTD12Q96CX2 325 aaKnown RBP6.13□□□□□ -1.43
HMGN1P11-201ENST00000508668 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.13□□□□□ -1.43
HMGN1P11-201ENST00000508668 ATP1B4Q9UN42 357 aaPredicted RBP6.13□□□□□ -1.43
HMGN1P11-201ENST00000508668 BCAMP50895 628 aa6.12□□□□□ -1.43
HMGN1P11-201ENST00000508668 ARID4BQ4LE39 1312 aaPredicted RBP6.12□□□□□ -1.43
HMGN1P11-201ENST00000508668 SLF2Q8IX21 1173 aa6.12□□□□□ -1.43
HMGN1P11-201ENST00000508668 FAM117AQ9C073 453 aa6.12□□□□□ -1.43
HMGN1P11-201ENST00000508668 HCSTQ9UBK5 93 aa6.12□□□□□ -1.43
HMGN1P11-201ENST00000508668 KIAA0556O60303 1618 aa6.11□□□□□ -1.43
HMGN1P11-201ENST00000508668 UGGT2Q9NYU1 1516 aa6.11□□□□□ -1.43
HMGN1P11-201ENST00000508668 WDR7Q9Y4E6 1490 aa6.11□□□□□ -1.43
HMGN1P11-201ENST00000508668 CD109Q6YHK3 1445 aa6.11□□□□□ -1.43
HMGN1P11-201ENST00000508668 IL27Q8NEV9 243 aa6.11□□□□□ -1.43
HMGN1P11-201ENST00000508668 BEGAINQ9BUH8 593 aa6.11□□□□□ -1.43
HMGN1P11-201ENST00000508668 CTTNBP2Q8WZ74 1663 aa6.1□□□□□ -1.43
HMGN1P11-201ENST00000508668 GLI2P10070 1586 aa6.1□□□□□ -1.43
HMGN1P11-201ENST00000508668 PLEKHD1A6NEE1 506 aa6.1□□□□□ -1.43
HMGN1P11-201ENST00000508668 SOWAHBA6NEL2 793 aa6.1□□□□□ -1.43
HMGN1P11-201ENST00000508668 SLC10A3P09131 477 aa6.1□□□□□ -1.43
HMGN1P11-201ENST00000508668 CD46P15529 392 aa6.1□□□□□ -1.43
HMGN1P11-201ENST00000508668 UBTFP17480 764 aaKnown RBP6.1□□□□□ -1.43
HMGN1P11-201ENST00000508668 RSPH4AQ5TD94 716 aa6.1□□□□□ -1.43
HMGN1P11-201ENST00000508668 HPS5Q9UPZ3 1129 aa6.1□□□□□ -1.43
HMGN1P11-201ENST00000508668 EPRSP07814 1512 aaKnown RBP6.09□□□□□ -1.43
HMGN1P11-201ENST00000508668 DISP1Q96F81 1524 aa6.09□□□□□ -1.43
HMGN1P11-201ENST00000508668 KDM5BQ9UGL1 1544 aa6.09□□□□□ -1.43
HMGN1P11-201ENST00000508668 CFHP08603 1231 aa6.09□□□□□ -1.43
HMGN1P11-201ENST00000508668 DDRGK1Q96HY6 314 aa6.09□□□□□ -1.43
HMGN1P11-201ENST00000508668 CDK11AQ9UQ88 783 aaPredicted RBP6.09□□□□□ -1.43
HMGN1P11-201ENST00000508668 ZCCHC11Q5TAX3 1644 aaKnown RBP6.09□□□□□ -1.43
HMGN1P11-201ENST00000508668 EEA1Q15075 1411 aa6.08□□□□□ -1.44
HMGN1P11-201ENST00000508668 PPP4CP60510 307 aa6.08□□□□□ -1.44
HMGN1P11-201ENST00000508668 THSD4Q6ZMP0 1018 aa6.08□□□□□ -1.44
HMGN1P11-201ENST00000508668 TSR3Q9UJK0 312 aaKnown RBP6.08□□□□□ -1.44
HMGN1P11-201ENST00000508668 PHLDB1Q86UU1 1377 aa6.07□□□□□ -1.44
HMGN1P11-201ENST00000508668 PTPN5P54829 565 aa6.07□□□□□ -1.44
HMGN1P11-201ENST00000508668 NUTM1Q86Y26 1132 aa6.07□□□□□ -1.44
HMGN1P11-201ENST00000508668 NECTIN2Q92692 538 aa6.07□□□□□ -1.44
HMGN1P11-201ENST00000508668 WBP1LQ9NX94 342 aa6.07□□□□□ -1.44
HMGN1P11-201ENST00000508668 ADGRL1O94910 1474 aa6.07□□□□□ -1.44
HMGN1P11-201ENST00000508668 PLEKHG3A1L390 1219 aa6.06□□□□□ -1.44
HMGN1P11-201ENST00000508668 GCGRP47871 477 aa6.06□□□□□ -1.44
HMGN1P11-201ENST00000508668 KMT5BQ4FZB7 885 aa6.06□□□□□ -1.44
HMGN1P11-201ENST00000508668 CFAP43Q8NDM7 1665 aa6.05□□□□□ -1.44
HMGN1P11-201ENST00000508668 KDM4AO75164 1064 aa6.05□□□□□ -1.44
HMGN1P11-201ENST00000508668 SPIRE2Q8WWL2 714 aa6.05□□□□□ -1.44
HMGN1P11-201ENST00000508668 ESF1Q9H501 851 aaKnown RBP6.05□□□□□ -1.44
HMGN1P11-201ENST00000508668 MAP3K4Q9Y6R4 1608 aa6.05□□□□□ -1.44
HMGN1P11-201ENST00000508668 PRXQ9BXM0 1461 aa6.04□□□□□ -1.44
HMGN1P11-201ENST00000508668 APLP1P51693 650 aa6.04□□□□□ -1.44
HMGN1P11-201ENST00000508668 TMEM132AQ24JP5 1023 aa6.04□□□□□ -1.44
HMGN1P11-201ENST00000508668 TBC1D2Q9BYX2 928 aa6.04□□□□□ -1.44
HMGN1P11-201ENST00000508668 MAGI3Q5TCQ9 1506 aa6.04□□□□□ -1.44
HMGN1P11-201ENST00000508668 POGZQ7Z3K3 1410 aa6.03□□□□□ -1.44
HMGN1P11-201ENST00000508668 FUT2Q10981 343 aa6.03□□□□□ -1.44
HMGN1P11-201ENST00000508668 PRR14Q9BWN1 585 aa6.03□□□□□ -1.44
HMGN1P11-201ENST00000508668 ABCA8O94911 1581 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms