RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 MAPK8IP3Q9UPT6 1336 aa16.85■□□□□ 0.29
CAST-223ENST00000508608 RUNDC1Q96C34 613 aa16.85■□□□□ 0.29
CAST-223ENST00000508608 RPGRIP1LQ68CZ1 1315 aa16.84■□□□□ 0.29
CAST-223ENST00000508608 NPATQ14207 1427 aa16.84■□□□□ 0.29
CAST-223ENST00000508608 CLUAP1Q96AJ1 413 aa16.84■□□□□ 0.29
CAST-223ENST00000508608 C14orf93Q9H972 538 aaKnown RBP16.84■□□□□ 0.29
CAST-223ENST00000508608 DMRT2Q9Y5R5 561 aa16.84■□□□□ 0.29
CAST-223ENST00000508608 CFAP65Q6ZU64 1925 aaKnown RBP16.83■□□□□ 0.29
CAST-223ENST00000508608 GLI2P10070 1586 aa16.83■□□□□ 0.28
CAST-223ENST00000508608 ARHGEF28Q8N1W1 1705 aaKnown RBP16.82■□□□□ 0.28
CAST-223ENST00000508608 POGZQ7Z3K3 1410 aa16.82■□□□□ 0.28
CAST-223ENST00000508608 FRMPD1Q5SYB0 1578 aa16.82■□□□□ 0.28
CAST-223ENST00000508608 MLH3Q9UHC1 1453 aa16.82■□□□□ 0.28
CAST-223ENST00000508608 NSD2O96028 1365 aa16.82■□□□□ 0.28
CAST-223ENST00000508608 CHGAP10645 457 aaKnown RBP16.82■□□□□ 0.28
CAST-223ENST00000508608 CFAP53Q96M91 514 aa16.82■□□□□ 0.28
CAST-223ENST00000508608 CAMSAP1Q5T5Y3 1602 aa16.82■□□□□ 0.28
CAST-223ENST00000508608 NFKBIBQ15653 356 aa16.81■□□□□ 0.28
CAST-223ENST00000508608 TRAK1Q9UPV9 953 aa16.81■□□□□ 0.28
CAST-223ENST00000508608 NCBP3Q53F19 620 aaKnown RBP16.81■□□□□ 0.28
CAST-223ENST00000508608 WDR63Q8IWG1 891 aa16.81■□□□□ 0.28
CAST-223ENST00000508608 PUS7Q96PZ0 661 aaKnown RBP16.81■□□□□ 0.28
CAST-223ENST00000508608 ZMYM3Q14202 1370 aa16.8■□□□□ 0.28
CAST-223ENST00000508608 ABCC3O15438 1527 aa16.8■□□□□ 0.28
CAST-223ENST00000508608 IGHDP01880 384 aa16.79■□□□□ 0.28
CAST-223ENST00000508608 CCDC27Q2M243 656 aa16.79■□□□□ 0.28
CAST-223ENST00000508608 PHF23Q9BUL5 403 aaPredicted RBP16.79■□□□□ 0.28
CAST-223ENST00000508608 PIK3C2BO00750 1634 aa16.79■□□□□ 0.28
CAST-223ENST00000508608 PMFBP1Q8TBY8 1022 aa16.79■□□□□ 0.28
CAST-223ENST00000508608 TCP11L2Q8N4U5 519 aa16.78■□□□□ 0.28
CAST-223ENST00000508608 SLC4A3P48751 1232 aa16.78■□□□□ 0.28
CAST-223ENST00000508608 SLC12A5Q9H2X9 1139 aa16.78■□□□□ 0.28
CAST-223ENST00000508608 COG6Q9Y2V7 657 aa16.78■□□□□ 0.28
CAST-223ENST00000508608 ADGRB2O60241 1585 aa16.77■□□□□ 0.28
CAST-223ENST00000508608 RARSP54136 660 aaKnown RBP16.77■□□□□ 0.28
CAST-223ENST00000508608 GSE1Q14687 1217 aa16.77■□□□□ 0.28
CAST-223ENST00000508608 PANK1Q8TE04 598 aa16.77■□□□□ 0.28
CAST-223ENST00000508608 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.28
CAST-223ENST00000508608 EVC2Q86UK5 1308 aa16.76■□□□□ 0.27
CAST-223ENST00000508608 TULP4Q9NRJ4 1543 aa16.76■□□□□ 0.27
CAST-223ENST00000508608 FRAT1Q92837 279 aaPredicted RBP16.76■□□□□ 0.27
CAST-223ENST00000508608 TNNT2P45379 298 aaPredicted RBP16.75■□□□□ 0.27
CAST-223ENST00000508608 MYH16Q9H6N6 1097 aa16.75■□□□□ 0.27
CAST-223ENST00000508608 SIGLEC1Q9BZZ2 1709 aa16.75■□□□□ 0.27
CAST-223ENST00000508608 NEXMIFQ5QGS0 1516 aa16.75■□□□□ 0.27
CAST-223ENST00000508608 NEUROD2Q15784 382 aa16.75■□□□□ 0.27
CAST-223ENST00000508608 MTHFSP49914 203 aa16.74■□□□□ 0.27
CAST-223ENST00000508608 CD109Q6YHK3 1445 aa16.74■□□□□ 0.27
CAST-223ENST00000508608 RRP7AQ9Y3A4 280 aaKnown RBP16.74■□□□□ 0.27
CAST-223ENST00000508608 ANKRD26Q9UPS8 1709 aa16.73■□□□□ 0.27
CAST-223ENST00000508608 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
CAST-223ENST00000508608 TMEM132EQ6IEE7 984 aa16.72■□□□□ 0.27
CAST-223ENST00000508608 GGT6Q6P531 493 aa16.72■□□□□ 0.27
CAST-223ENST00000508608 VGFO15240 615 aaPredicted RBP16.72■□□□□ 0.27
CAST-223ENST00000508608 BECN1Q14457 450 aa16.72■□□□□ 0.27
CAST-223ENST00000508608 CT47B1P0C2W7 299 aaPredicted RBP16.71■□□□□ 0.27
CAST-223ENST00000508608 USP19O94966 1318 aa16.71■□□□□ 0.26
CAST-223ENST00000508608 UPF2Q9HAU5 1272 aaKnown RBP16.7■□□□□ 0.26
CAST-223ENST00000508608 NLRP1Q9C000 1473 aa16.7■□□□□ 0.26
CAST-223ENST00000508608 RWDD1Q9H446 243 aaPredicted RBP16.69■□□□□ 0.26
CAST-223ENST00000508608 ZFYVE9O95405 1425 aa16.68■□□□□ 0.26
CAST-223ENST00000508608 ABCC11Q96J66 1382 aa16.68■□□□□ 0.26
CAST-223ENST00000508608 U2AF1L5P0DN76 240 aaPredicted RBP16.68■□□□□ 0.26
CAST-223ENST00000508608 U2AF1Q01081 240 aaKnown RBP eCLIP16.68■□□□□ 0.26
CAST-223ENST00000508608 ARHGAP31Q2M1Z3 1444 aa16.68■□□□□ 0.26
CAST-223ENST00000508608 NEO1Q92859 1461 aa16.67■□□□□ 0.26
CAST-223ENST00000508608 CLTCQ00610 1675 aaKnown RBP16.67■□□□□ 0.26
CAST-223ENST00000508608 DIP2CQ9Y2E4 1556 aa16.67■□□□□ 0.26
CAST-223ENST00000508608 RLBP1P12271 317 aa16.67■□□□□ 0.26
CAST-223ENST00000508608 IL27Q8NEV9 243 aa16.66■□□□□ 0.26
CAST-223ENST00000508608 PCDHB15Q9Y5E8 787 aa16.66■□□□□ 0.26
CAST-223ENST00000508608 ZKSCAN2Q63HK3 967 aa16.66■□□□□ 0.26
CAST-223ENST00000508608 MED14O60244 1454 aa16.65■□□□□ 0.26
CAST-223ENST00000508608 MVPQ14764 893 aaKnown RBP16.65■□□□□ 0.26
CAST-223ENST00000508608 FRAT2O75474 233 aaPredicted RBP16.65■□□□□ 0.26
CAST-223ENST00000508608 FTSJ3Q8IY81 847 aaKnown RBP16.64■□□□□ 0.25
CAST-223ENST00000508608 BCL2L13Q9BXK5 485 aa16.64■□□□□ 0.25
CAST-223ENST00000508608 PDZRN3Q9UPQ7 1066 aa16.64■□□□□ 0.25
CAST-223ENST00000508608 MYO5BQ9ULV0 1848 aa16.64■□□□□ 0.25
CAST-223ENST00000508608 A0A1W2PP64 1363 aa16.63■□□□□ 0.25
CAST-223ENST00000508608 COL3A1P02461 1466 aaPredicted RBP16.63■□□□□ 0.25
CAST-223ENST00000508608 SEC24BO95487 1268 aa16.63■□□□□ 0.25
CAST-223ENST00000508608 ATAD2Q6PL18 1390 aa16.63■□□□□ 0.25
CAST-223ENST00000508608 DZIP1LQ8IYY4 767 aaKnown RBP16.62■□□□□ 0.25
CAST-223ENST00000508608 CABP2Q9NPB3 220 aa16.62■□□□□ 0.25
CAST-223ENST00000508608 KIF20BQ96Q89 1820 aa16.62■□□□□ 0.25
CAST-223ENST00000508608 PREX1Q8TCU6 1659 aa16.62■□□□□ 0.25
CAST-223ENST00000508608 IL16Q14005 1332 aa16.61■□□□□ 0.25
CAST-223ENST00000508608 TBC1D32Q96NH3 1257 aa16.61■□□□□ 0.25
CAST-223ENST00000508608 TNNQ9UQP3 1299 aa16.61■□□□□ 0.25
CAST-223ENST00000508608 RICTORQ6R327 1708 aa16.61■□□□□ 0.25
CAST-223ENST00000508608 SLC52A1Q9NWF4 448 aa16.6■□□□□ 0.25
CAST-223ENST00000508608 TERF2IPQ9NYB0 399 aa16.6■□□□□ 0.25
CAST-223ENST00000508608 PTPRMP28827 1452 aa16.6■□□□□ 0.25
CAST-223ENST00000508608 TMEM131LA2VDJ0 1609 aa16.6■□□□□ 0.25
CAST-223ENST00000508608 SRPK2P78362 688 aaKnown RBP16.59■□□□□ 0.25
CAST-223ENST00000508608 SMC4Q9NTJ3 1288 aa16.59■□□□□ 0.25
CAST-223ENST00000508608 PLEKHF1Q96S99 279 aa16.59■□□□□ 0.25
CAST-223ENST00000508608 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
CAST-223ENST00000508608 DDX19BQ9UMR2 479 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms