RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 COL16A1Q07092 1604 aaPredicted RBP34.99■■■■□ 3.19
SRPK1-210ENST00000508473 SAFB2Q14151 953 aaKnown RBP eCLIP34.98■■■■□ 3.19
SRPK1-210ENST00000508473 ORAI2Q96SN7 254 aa34.98■■■■□ 3.19
SRPK1-210ENST00000508473 ADGRB1O14514 1584 aa34.98■■■■□ 3.19
SRPK1-210ENST00000508473 NEUROD1Q13562 356 aa34.97■■■■□ 3.19
SRPK1-210ENST00000508473 PRAM1Q96QH2 718 aa34.97■■■■□ 3.19
SRPK1-210ENST00000508473 TRAK1Q9UPV9 953 aa34.97■■■■□ 3.19
SRPK1-210ENST00000508473 JCADQ9P266 1359 aa34.97■■■■□ 3.19
SRPK1-210ENST00000508473 PHF23Q9BUL5 403 aaPredicted RBP34.96■■■■□ 3.19
SRPK1-210ENST00000508473 NUTM2FA1L443 756 aa34.95■■■■□ 3.19
SRPK1-210ENST00000508473 POGKQ9P215 609 aa34.94■■■■□ 3.18
SRPK1-210ENST00000508473 CDC42BPGQ6DT37 1551 aa34.94■■■■□ 3.18
SRPK1-210ENST00000508473 L3MBTL2Q969R5 705 aa34.9■■■■□ 3.18
SRPK1-210ENST00000508473 ESCO1Q5FWF5 840 aa34.89■■■■□ 3.18
SRPK1-210ENST00000508473 DLC1Q96QB1 1528 aa34.89■■■■□ 3.18
SRPK1-210ENST00000508473 SOCS7O14512 581 aa34.87■■■■□ 3.17
SRPK1-210ENST00000508473 NHSL1Q5SYE7 1610 aa34.86■■■■□ 3.17
SRPK1-210ENST00000508473 LRRC59Q96AG4 307 aaKnown RBP34.82■■■■□ 3.16
SRPK1-210ENST00000508473 NBPF1Q3BBV0 1214 aa34.81■■■■□ 3.16
SRPK1-210ENST00000508473 HIRIP3Q9BW71 556 aaPredicted RBP34.8■■■■□ 3.16
SRPK1-210ENST00000508473 SPATA31A6Q5VVP1 1343 aa34.8■■■■□ 3.16
SRPK1-210ENST00000508473 MINK1Q8N4C8 1332 aaPredicted RBP34.8■■■■□ 3.16
SRPK1-210ENST00000508473 FMN2Q9NZ56 1722 aa34.78■■■■□ 3.16
SRPK1-210ENST00000508473 NUTM2BA6NNL0 878 aaPredicted RBP34.76■■■■□ 3.16
SRPK1-210ENST00000508473 NUTM2EB1AL46 878 aaPredicted RBP34.76■■■■□ 3.16
SRPK1-210ENST00000508473 FOXO3O43524 673 aa34.76■■■■□ 3.16
SRPK1-210ENST00000508473 NUTM2AQ8IVF1 878 aaPredicted RBP34.76■■■■□ 3.16
SRPK1-210ENST00000508473 RGS17Q9UGC6 210 aaPredicted RBP34.76■■■■□ 3.16
SRPK1-210ENST00000508473 SOS2Q07890 1332 aaPredicted RBP34.76■■■■□ 3.15
SRPK1-210ENST00000508473 SHPRHQ149N8 1683 aa34.75■■■■□ 3.15
SRPK1-210ENST00000508473 XPCQ01831 940 aaPredicted RBP34.74■■■■□ 3.15
SRPK1-210ENST00000508473 LRP6O75581 1613 aa34.73■■■■□ 3.15
SRPK1-210ENST00000508473 NPHP3Q7Z494 1330 aa34.73■■■■□ 3.15
SRPK1-210ENST00000508473 KIAA1210Q9ULL0 1709 aa34.72■■■■□ 3.15
SRPK1-210ENST00000508473 MEX3CQ5U5Q3 659 aaKnown RBP34.71■■■■□ 3.15
SRPK1-210ENST00000508473 PNPLA6Q8IY17 1366 aa34.71■■■■□ 3.15
SRPK1-210ENST00000508473 ARHGEF28Q8N1W1 1705 aaKnown RBP34.68■■■■□ 3.14
SRPK1-210ENST00000508473 ADGRB2O60241 1585 aa34.67■■■■□ 3.14
SRPK1-210ENST00000508473 PHF8Q9UPP1 1060 aa34.67■■■■□ 3.14
SRPK1-210ENST00000508473 WASLO00401 505 aaPredicted RBP34.65■■■■□ 3.14
SRPK1-210ENST00000508473 PCGF6Q9BYE7 350 aa34.64■■■■□ 3.14
SRPK1-210ENST00000508473 PXDNQ92626 1479 aa34.64■■■■□ 3.14
SRPK1-210ENST00000508473 RGPD8O14715 1765 aaPredicted RBP34.62■■■■□ 3.13
SRPK1-210ENST00000508473 ANKARQ7Z5J8 1434 aa34.62■■■■□ 3.13
SRPK1-210ENST00000508473 PMFBP1Q8TBY8 1022 aa34.61■■■■□ 3.13
SRPK1-210ENST00000508473 TONSLQ96HA7 1378 aa34.61■■■■□ 3.13
SRPK1-210ENST00000508473 PRR36Q9H6K5 1346 aa34.6■■■■□ 3.13
SRPK1-210ENST00000508473 POTEAQ6S8J7 498 aa34.6■■■■□ 3.13
SRPK1-210ENST00000508473 NBPF8Q3BBV2 869 aa34.59■■■■□ 3.13
SRPK1-210ENST00000508473 KRT28Q7Z3Y7 464 aa34.59■■■■□ 3.13
SRPK1-210ENST00000508473 KIF1AQ12756 1690 aa34.59■■■■□ 3.13
SRPK1-210ENST00000508473 USP32Q8NFA0 1604 aa34.59■■■■□ 3.13
SRPK1-210ENST00000508473 EIF3AQ14152 1382 aaKnown RBP34.58■■■■□ 3.13
SRPK1-210ENST00000508473 TULP4Q9NRJ4 1543 aa34.55■■■■□ 3.12
SRPK1-210ENST00000508473 ROCK2O75116 1388 aaKnown RBP34.55■■■■□ 3.12
SRPK1-210ENST00000508473 CDK19Q9BWU1 502 aa34.55■■■■□ 3.12
SRPK1-210ENST00000508473 TRPM1Q7Z4N2 1603 aa34.55■■■■□ 3.12
SRPK1-210ENST00000508473 ADAMTS2O95450 1211 aa34.54■■■■□ 3.12
SRPK1-210ENST00000508473 CENPJQ9HC77 1338 aaPredicted RBP34.54■■■■□ 3.12
SRPK1-210ENST00000508473 PSME1Q06323 249 aa34.53■■■■□ 3.12
SRPK1-210ENST00000508473 C8orf37Q96NL8 207 aa34.51■■■■□ 3.12
SRPK1-210ENST00000508473 SPATA31A3Q5VYP0 1347 aa34.51■■■■□ 3.11
SRPK1-210ENST00000508473 NUDT16Q96DE0 195 aaKnown RBP34.5■■■■□ 3.11
SRPK1-210ENST00000508473 ZNF772Q68DY9 489 aaPredicted RBP34.47■■■■□ 3.11
SRPK1-210ENST00000508473 AFF2P51816 1311 aa34.47■■■■□ 3.11
SRPK1-210ENST00000508473 NGDNQ8NEJ9 315 aaKnown RBP34.45■■■■□ 3.11
SRPK1-210ENST00000508473 ATP7BP35670 1465 aa34.45■■■■□ 3.1
SRPK1-210ENST00000508473 COL22A1Q8NFW1 1626 aaPredicted RBP34.44■■■■□ 3.1
SRPK1-210ENST00000508473 LMOD2Q6P5Q4 547 aa34.44■■■■□ 3.1
SRPK1-210ENST00000508473 PLEKHG5O94827 1062 aa34.43■■■■□ 3.1
SRPK1-210ENST00000508473 TNS3Q68CZ2 1445 aa34.42■■■■□ 3.1
SRPK1-210ENST00000508473 SRPK2P78362 688 aaKnown RBP34.42■■■■□ 3.1
SRPK1-210ENST00000508473 NGLY1Q96IV0 654 aa34.42■■■■□ 3.1
SRPK1-210ENST00000508473 SBNO1A3KN83 1393 aa34.41■■■■□ 3.1
SRPK1-210ENST00000508473 GPRASP1Q5JY77 1395 aa34.41■■■■□ 3.1
SRPK1-210ENST00000508473 CABP2Q9NPB3 220 aa34.4■■■■□ 3.1
SRPK1-210ENST00000508473 QRICH2Q9H0J4 1663 aa34.39■■■■□ 3.1
SRPK1-210ENST00000508473 CARD11Q9BXL7 1154 aa34.39■■■■□ 3.1
SRPK1-210ENST00000508473 CCDC61Q9Y6R9 512 aa34.38■■■■□ 3.09
SRPK1-210ENST00000508473 CABLES1Q8TDN4 633 aa34.36■■■■□ 3.09
SRPK1-210ENST00000508473 RALGAPBQ86X10 1494 aa34.34■■■■□ 3.09
SRPK1-210ENST00000508473 PAK3O75914 559 aaPredicted RBP34.33■■■■□ 3.09
SRPK1-210ENST00000508473 HAP1P54257 671 aaPredicted RBP34.33■■■■□ 3.09
SRPK1-210ENST00000508473 ARHGEF10O15013 1369 aa34.33■■■■□ 3.09
SRPK1-210ENST00000508473 ITSN1Q15811 1721 aa34.33■■■■□ 3.09
SRPK1-210ENST00000508473 ACEP12821 1306 aa34.3■■■■□ 3.08
SRPK1-210ENST00000508473 EVC2Q86UK5 1308 aa34.3■■■■□ 3.08
SRPK1-210ENST00000508473 PLEKHG3A1L390 1219 aa34.29■■■■□ 3.08
SRPK1-210ENST00000508473 QTRT2Q9H974 415 aaKnown RBP34.29■■■■□ 3.08
SRPK1-210ENST00000508473 USP21Q9UK80 565 aa34.29■■■■□ 3.08
SRPK1-210ENST00000508473 TRPM3Q9HCF6 1732 aaPredicted RBP34.29■■■■□ 3.08
SRPK1-210ENST00000508473 RXRBP28702 533 aa34.28■■■■□ 3.08
SRPK1-210ENST00000508473 TOPAZ1Q8N9V7 1692 aa34.28■■■■□ 3.08
SRPK1-210ENST00000508473 FNBP4Q8N3X1 1017 aaPredicted RBP34.27■■■■□ 3.08
SRPK1-210ENST00000508473 PPIP5K1Q6PFW1 1433 aa34.27■■■■□ 3.08
SRPK1-210ENST00000508473 POLR3AO14802 1390 aaPredicted RBP34.26■■■■□ 3.08
SRPK1-210ENST00000508473 CLSPNQ9HAW4 1339 aa34.24■■■■□ 3.07
SRPK1-210ENST00000508473 CABP1Q9NZU7 370 aa34.23■■■■□ 3.07
SRPK1-210ENST00000508473 CCER1Q8TC90 406 aaPredicted RBP34.21■■■■□ 3.07
SRPK1-210ENST00000508473 ALS2Q96Q42 1657 aa34.2■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms