RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, human

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4-208	ENST00000508342	KRI1	Q8N9T8	703 aa	Known RBP	3.88	□□□□□ -1.79
NEDD4-208	ENST00000508342	RPRD2	Q5VT52	1461 aa	Known RBP	3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	HSPA1L	P34931	641 aa		3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	HSP90AA1	P07900	732 aa	Known RBP	3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	BAG6	P46379	1132 aa		3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	ABCC1	P33527	1531 aa		3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	MYO3A	Q8NEV4	1616 aa		3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	ABCA6	Q8N139	1617 aa		3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	SETD5	Q9C0A6	1442 aa		3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	NLRP2	Q9NX02	1062 aa		3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	MAPK8IP3	Q9UPT6	1336 aa		3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	MYCN	P04198	464 aa	Predicted RBP	3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	DDX54	Q8TDD1	881 aa	Known RBP	3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	PRDM11	Q9NQV5	511 aa		3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	MIA2	Q96PC5	1412 aa		3.87	□□□□□ -1.79
NEDD4-208	ENST00000508342	ANKRD50	Q9ULJ7	1429 aa		3.86	□□□□□ -1.79
NEDD4-208	ENST00000508342	DHX29	Q7Z478	1369 aa	Known RBP	3.86	□□□□□ -1.79
NEDD4-208	ENST00000508342	RNF17	Q9BXT8	1623 aa	Known RBP	3.86	□□□□□ -1.79
NEDD4-208	ENST00000508342	NUDC	Q9Y266	331 aa		3.86	□□□□□ -1.79
NEDD4-208	ENST00000508342	PRAM1	Q96QH2	718 aa		3.86	□□□□□ -1.79
NEDD4-208	ENST00000508342	CWC22	Q9HCG8	908 aa	Known RBP	3.86	□□□□□ -1.79
NEDD4-208	ENST00000508342	FGD6	Q6ZV73	1430 aa		3.86	□□□□□ -1.79
NEDD4-208	ENST00000508342	PHF14	O94880	888 aa		3.86	□□□□□ -1.79
NEDD4-208	ENST00000508342	MORC1	Q86VD1	984 aa		3.86	□□□□□ -1.79
NEDD4-208	ENST00000508342	RTEL1-TNFRSF6B	F6WH68	1400 aa		3.86	□□□□□ -1.79
NEDD4-208	ENST00000508342	SPHKAP	Q2M3C7	1700 aa		3.86	□□□□□ -1.79
NEDD4-208	ENST00000508342	MROH2A	A6NES4	1674 aa		3.86	□□□□□ -1.79
NEDD4-208	ENST00000508342	ANP32C	O43423	234 aa		3.86	□□□□□ -1.79
NEDD4-208	ENST00000508342	GLIPR1L2	Q4G1C9	344 aa		3.86	□□□□□ -1.79
NEDD4-208	ENST00000508342	CC2D1B	Q5T0F9	858 aa	Known RBP	3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	ARAP3	Q8WWN8	1544 aa		3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	SCAF11	Q99590	1463 aa	Known RBP	3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	LRRIQ1	Q96JM4	1722 aa		3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	GPR162	Q16538	588 aa		3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	TTC5	Q8N0Z6	440 aa		3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	RAPGEF4	Q8WZA2	1011 aa		3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	APBA3	O96018	575 aa		3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	ERICH6B	Q5W0A0	696 aa		3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	TMEM132E	Q6IEE7	984 aa		3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	RBM42	Q9BTD8	480 aa	Known RBP	3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	STK32B	Q9NY57	414 aa		3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	ROCK1	Q13464	1354 aa		3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	TSHZ2	Q9NRE2	1034 aa		3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	CDK19	Q9BWU1	502 aa		3.85	□□□□□ -1.79
NEDD4-208	ENST00000508342	EFCAB6	Q5THR3	1501 aa		3.84	□□□□□ -1.79
NEDD4-208	ENST00000508342	NLRP13	Q86W25	1043 aa		3.84	□□□□□ -1.79
NEDD4-208	ENST00000508342	AK7	Q96M32	723 aa		3.84	□□□□□ -1.79
NEDD4-208	ENST00000508342	BCCIP	Q9P287	314 aa	Known RBP eCLIP	3.84	□□□□□ -1.79
NEDD4-208	ENST00000508342	TRPC5	Q9UL62	973 aa	Predicted RBP	3.84	□□□□□ -1.79
NEDD4-208	ENST00000508342	CPS1	P31327	1500 aa		3.84	□□□□□ -1.79
NEDD4-208	ENST00000508342	GPATCH8	Q9UKJ3	1502 aa	Known RBP	3.84	□□□□□ -1.79
NEDD4-208	ENST00000508342	NLRP1	Q9C000	1473 aa		3.84	□□□□□ -1.79
NEDD4-208	ENST00000508342	VASP	P50552	380 aa	Predicted RBP	3.84	□□□□□ -1.79
NEDD4-208	ENST00000508342	CABP2	Q9NPB3	220 aa		3.84	□□□□□ -1.79
NEDD4-208	ENST00000508342	DNMT1	P26358	1616 aa	Known RBP	3.84	□□□□□ -1.79
NEDD4-208	ENST00000508342	NLRP6	P59044	892 aa		3.84	□□□□□ -1.79
NEDD4-208	ENST00000508342	ZC3H6	P61129	1189 aa	Known RBP	3.84	□□□□□ -1.79
NEDD4-208	ENST00000508342	NPHP3	Q7Z494	1330 aa		3.84	□□□□□ -1.8
NEDD4-208	ENST00000508342	SLAIN2	Q9P270	581 aa		3.84	□□□□□ -1.8
NEDD4-208	ENST00000508342	PPRC1	Q5VV67	1664 aa	Known RBP	3.84	□□□□□ -1.8
NEDD4-208	ENST00000508342	TAT	P17735	454 aa	Predicted RBP	3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	PUS7	Q96PZ0	661 aa	Known RBP	3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	ATAD2	Q6PL18	1390 aa		3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	EIF2AK4	Q9P2K8	1649 aa	Known RBP	3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	FAM98C	Q17RN3	349 aa	Known RBP	3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	ISY1	Q9ULR0	285 aa	Known RBP	3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	PDIA4	P13667	645 aa	Known RBP	3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	ACSBG1	Q96GR2	724 aa		3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	MYH16	Q9H6N6	1097 aa		3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	RPGRIP1L	Q68CZ1	1315 aa		3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	HMGB1P1	B2RPK0	211 aa	Predicted RBP	3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	KIF6	Q6ZMV9	814 aa		3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	C19orf44	Q9H6X5	657 aa		3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	A2ML1	A8K2U0	1454 aa		3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	ARHGEF5	Q12774	1597 aa		3.83	□□□□□ -1.8
NEDD4-208	ENST00000508342	SETD1B	Q9UPS6	1966 aa	Known RBP	3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	GRM1	Q13255	1194 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	TAF7L	Q5H9L4	462 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	DDX17	Q92841	729 aa	Known RBP	3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	SPG7	Q9UQ90	795 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	DIP2C	Q9Y2E4	1556 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	AFF2	P51816	1311 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	EXOC5	O00471	708 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	KCNA6	P17658	529 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	CABP4	P57796	275 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	AIDA	Q96BJ3	306 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	CLEC11A	Q9Y240	323 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	CHMP3	Q9Y3E7	222 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	NPAT	Q14207	1427 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	FOXO3	O43524	673 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	ZPR1	O75312	459 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	NEUROD2	Q15784	382 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	WAPL	Q7Z5K2	1190 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	NGEF	Q8N5V2	710 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	ANP32B	Q92688	251 aa	Known RBP	3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	UPF2	Q9HAU5	1272 aa	Known RBP	3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	PIK3C2B	O00750	1634 aa		3.82	□□□□□ -1.8
NEDD4-208	ENST00000508342	KAT6B	Q8WYB5	2073 aa		3.82	□□□□□ -1.8

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