RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-222	ENST00000508238	ACIN1	Q9UKV3	1341 aa	Known RBP	11.92	□□□□□ -0.5
UBE2D3-222	ENST00000508238	TRPM2	O94759	1503 aa		11.92	□□□□□ -0.5
UBE2D3-222	ENST00000508238	ZNF326	Q5BKZ1	582 aa	Known RBP	11.9	□□□□□ -0.5
UBE2D3-222	ENST00000508238	MSH6	P52701	1360 aa		11.9	□□□□□ -0.5
UBE2D3-222	ENST00000508238	CLTCL1	P53675	1640 aa		11.89	□□□□□ -0.51
UBE2D3-222	ENST00000508238	RPGRIP1L	Q68CZ1	1315 aa		11.89	□□□□□ -0.51
UBE2D3-222	ENST00000508238	SETBP1	Q9Y6X0	1596 aa		11.89	□□□□□ -0.51
UBE2D3-222	ENST00000508238	KIF1B	O60333	1816 aa		11.89	□□□□□ -0.51
UBE2D3-222	ENST00000508238	RBM33	Q96EV2	1170 aa	Known RBP	11.89	□□□□□ -0.51
UBE2D3-222	ENST00000508238	DCAF8	Q5TAQ9	597 aa		11.88	□□□□□ -0.51
UBE2D3-222	ENST00000508238	ILDR2	Q71H61	639 aa		11.88	□□□□□ -0.51
UBE2D3-222	ENST00000508238	C19orf44	Q9H6X5	657 aa		11.88	□□□□□ -0.51
UBE2D3-222	ENST00000508238	SLAIN2	Q9P270	581 aa		11.88	□□□□□ -0.51
UBE2D3-222	ENST00000508238	AMOTL2	Q9Y2J4	779 aa		11.88	□□□□□ -0.51
UBE2D3-222	ENST00000508238	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.88	□□□□□ -0.51
UBE2D3-222	ENST00000508238	NRXN3	Q9Y4C0	1643 aa		11.87	□□□□□ -0.51
UBE2D3-222	ENST00000508238	VGF	O15240	615 aa	Predicted RBP	11.87	□□□□□ -0.51
UBE2D3-222	ENST00000508238	GSE1	Q14687	1217 aa		11.87	□□□□□ -0.51
UBE2D3-222	ENST00000508238	MPHOSPH9	Q99550	1183 aa		11.87	□□□□□ -0.51
UBE2D3-222	ENST00000508238	PTPRU	Q92729	1446 aa		11.86	□□□□□ -0.51
UBE2D3-222	ENST00000508238	NEXMIF	Q5QGS0	1516 aa		11.86	□□□□□ -0.51
UBE2D3-222	ENST00000508238	RASEF	Q8IZ41	740 aa		11.86	□□□□□ -0.51
UBE2D3-222	ENST00000508238	MET	P08581	1390 aa		11.85	□□□□□ -0.51
UBE2D3-222	ENST00000508238	CADPS2	Q86UW7	1296 aa		11.85	□□□□□ -0.51
UBE2D3-222	ENST00000508238	FAM212A	Q96EL1	285 aa		11.84	□□□□□ -0.51
UBE2D3-222	ENST00000508238	SETD5	Q9C0A6	1442 aa		11.84	□□□□□ -0.51
UBE2D3-222	ENST00000508238	EVX2	Q03828	476 aa		11.83	□□□□□ -0.52
UBE2D3-222	ENST00000508238	MED1	Q15648	1581 aa	Predicted RBP	11.83	□□□□□ -0.52
UBE2D3-222	ENST00000508238	XRN1	Q8IZH2	1706 aa	Known RBP	11.83	□□□□□ -0.52
UBE2D3-222	ENST00000508238	ROBO1	Q9Y6N7	1651 aa		11.82	□□□□□ -0.52
UBE2D3-222	ENST00000508238	SOCS7	O14512	581 aa		11.82	□□□□□ -0.52
UBE2D3-222	ENST00000508238	ATF3	P18847	181 aa		11.82	□□□□□ -0.52
UBE2D3-222	ENST00000508238	C14orf37	Q86TY3	774 aa		11.82	□□□□□ -0.52
UBE2D3-222	ENST00000508238	CCDC144A	A2RUR9	1427 aa		11.82	□□□□□ -0.52
UBE2D3-222	ENST00000508238	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.81	□□□□□ -0.52
UBE2D3-222	ENST00000508238	DCC	P43146	1447 aa		11.81	□□□□□ -0.52
UBE2D3-222	ENST00000508238	SPATA31E1	Q6ZUB1	1445 aa		11.81	□□□□□ -0.52
UBE2D3-222	ENST00000508238	HRC	P23327	699 aa		11.81	□□□□□ -0.52
UBE2D3-222	ENST00000508238	PRAG1	Q86YV5	1406 aa		11.8	□□□□□ -0.52
UBE2D3-222	ENST00000508238	RGL2	O15211	777 aa		11.8	□□□□□ -0.52
UBE2D3-222	ENST00000508238	PPL	O60437	1756 aa		11.79	□□□□□ -0.52
UBE2D3-222	ENST00000508238	ANKRD30B	Q9BXX2	1392 aa		11.79	□□□□□ -0.52
UBE2D3-222	ENST00000508238	RAB3GAP2	Q9H2M9	1393 aa		11.78	□□□□□ -0.52
UBE2D3-222	ENST00000508238	PTCH1	Q13635	1447 aa		11.77	□□□□□ -0.52
UBE2D3-222	ENST00000508238	SETD1A	O15047	1707 aa	Known RBP	11.77	□□□□□ -0.52
UBE2D3-222	ENST00000508238	ADGRL3	Q9HAR2	1447 aa		11.77	□□□□□ -0.53
UBE2D3-222	ENST00000508238	RGL3	Q3MIN7	710 aa		11.76	□□□□□ -0.53
UBE2D3-222	ENST00000508238	BRINP3	Q76B58	766 aa		11.76	□□□□□ -0.53
UBE2D3-222	ENST00000508238	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.76	□□□□□ -0.53
UBE2D3-222	ENST00000508238	ADGRF5	Q8IZF2	1346 aa		11.76	□□□□□ -0.53
UBE2D3-222	ENST00000508238	JCAD	Q9P266	1359 aa		11.76	□□□□□ -0.53
UBE2D3-222	ENST00000508238	RGS17	Q9UGC6	210 aa	Predicted RBP	11.75	□□□□□ -0.53
UBE2D3-222	ENST00000508238	ROBO2	Q9HCK4	1378 aa		11.75	□□□□□ -0.53
UBE2D3-222	ENST00000508238	MST1R	Q04912	1400 aa		11.75	□□□□□ -0.53
UBE2D3-222	ENST00000508238	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.75	□□□□□ -0.53
UBE2D3-222	ENST00000508238	PHLPP1	O60346	1717 aa		11.74	□□□□□ -0.53
UBE2D3-222	ENST00000508238	COL16A1	Q07092	1604 aa	Predicted RBP	11.74	□□□□□ -0.53
UBE2D3-222	ENST00000508238	IFT172	Q9UG01	1749 aa		11.73	□□□□□ -0.53
UBE2D3-222	ENST00000508238	TECPR2	O15040	1411 aa		11.72	□□□□□ -0.53
UBE2D3-222	ENST00000508238	PIK3C2G	O75747	1445 aa		11.72	□□□□□ -0.53
UBE2D3-222	ENST00000508238	ABCC11	Q96J66	1382 aa		11.72	□□□□□ -0.53
UBE2D3-222	ENST00000508238	SPATA31A6	Q5VVP1	1343 aa		11.72	□□□□□ -0.53
UBE2D3-222	ENST00000508238	C14orf93	Q9H972	538 aa	Known RBP	11.72	□□□□□ -0.53
UBE2D3-222	ENST00000508238	LRPPRC	P42704	1394 aa	Known RBP	11.71	□□□□□ -0.53
UBE2D3-222	ENST00000508238	SIRT1	Q96EB6	747 aa		11.71	□□□□□ -0.53
UBE2D3-222	ENST00000508238	ASXL1	Q8IXJ9	1541 aa		11.7	□□□□□ -0.54
UBE2D3-222	ENST00000508238	NRXN1	Q9ULB1	1477 aa		11.7	□□□□□ -0.54
UBE2D3-222	ENST00000508238	NALCN	Q8IZF0	1738 aa		11.7	□□□□□ -0.54
UBE2D3-222	ENST00000508238	STAC3	Q96MF2	364 aa		11.7	□□□□□ -0.54
UBE2D3-222	ENST00000508238	C1orf167	Q5SNV9	1468 aa		11.7	□□□□□ -0.54
UBE2D3-222	ENST00000508238	PYGB	P11216	843 aa		11.69	□□□□□ -0.54
UBE2D3-222	ENST00000508238	LRRC59	Q96AG4	307 aa	Known RBP	11.69	□□□□□ -0.54
UBE2D3-222	ENST00000508238	MYOM2	P54296	1465 aa		11.69	□□□□□ -0.54
UBE2D3-222	ENST00000508238	CHRM1	P11229	460 aa	Predicted RBP	11.68	□□□□□ -0.54
UBE2D3-222	ENST00000508238	TMEM132E	Q6IEE7	984 aa		11.68	□□□□□ -0.54
UBE2D3-222	ENST00000508238	RNF25	Q96BH1	459 aa	Predicted RBP	11.67	□□□□□ -0.54
UBE2D3-222	ENST00000508238	STK26	Q9P289	416 aa		11.67	□□□□□ -0.54
UBE2D3-222	ENST00000508238	SHPRH	Q149N8	1683 aa		11.67	□□□□□ -0.54
UBE2D3-222	ENST00000508238	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.67	□□□□□ -0.54
UBE2D3-222	ENST00000508238	LAMC1	P11047	1609 aa		11.67	□□□□□ -0.54
UBE2D3-222	ENST00000508238	NHSL1	Q5SYE7	1610 aa		11.67	□□□□□ -0.54
UBE2D3-222	ENST00000508238	POTEA	Q6S8J7	498 aa		11.66	□□□□□ -0.54
UBE2D3-222	ENST00000508238	WAPL	Q7Z5K2	1190 aa		11.66	□□□□□ -0.54
UBE2D3-222	ENST00000508238	ORAI2	Q96SN7	254 aa		11.66	□□□□□ -0.54
UBE2D3-222	ENST00000508238	SOS2	Q07890	1332 aa	Predicted RBP	11.65	□□□□□ -0.54
UBE2D3-222	ENST00000508238	CFAP70	Q5T0N1	1121 aa		11.65	□□□□□ -0.54
UBE2D3-222	ENST00000508238	CDC42BPG	Q6DT37	1551 aa		11.65	□□□□□ -0.54
UBE2D3-222	ENST00000508238	KNDC1	Q76NI1	1749 aa		11.65	□□□□□ -0.54
UBE2D3-222	ENST00000508238	DHX57	Q6P158	1386 aa	Known RBP	11.65	□□□□□ -0.55
UBE2D3-222	ENST00000508238	C19orf67	A6NJJ6	358 aa		11.64	□□□□□ -0.55
UBE2D3-222	ENST00000508238	PAK3	O75914	559 aa	Predicted RBP	11.64	□□□□□ -0.55
UBE2D3-222	ENST00000508238	DDX17	Q92841	729 aa	Known RBP	11.64	□□□□□ -0.55
UBE2D3-222	ENST00000508238	LRP6	O75581	1613 aa		11.64	□□□□□ -0.55
UBE2D3-222	ENST00000508238	RIOK3	O14730	519 aa	Known RBP	11.63	□□□□□ -0.55
UBE2D3-222	ENST00000508238	PLEKHH1	Q9ULM0	1364 aa		11.63	□□□□□ -0.55
UBE2D3-222	ENST00000508238	ESCO1	Q5FWF5	840 aa		11.62	□□□□□ -0.55
UBE2D3-222	ENST00000508238	ZNF772	Q68DY9	489 aa	Predicted RBP	11.62	□□□□□ -0.55
UBE2D3-222	ENST00000508238	DCAF11	Q8TEB1	546 aa		11.62	□□□□□ -0.55
UBE2D3-222	ENST00000508238	CCDC61	Q9Y6R9	512 aa		11.62	□□□□□ -0.55
UBE2D3-222	ENST00000508238	PNPLA6	Q8IY17	1366 aa		11.62	□□□□□ -0.55

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