RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 CD46P15529 392 aa10.79□□□□□ -0.68
SPCS3-202ENST00000507001 MAP2K5Q13163 448 aa10.79□□□□□ -0.68
SPCS3-202ENST00000507001 RNF19BQ6ZMZ0 732 aa10.79□□□□□ -0.68
SPCS3-202ENST00000507001 MMP16P51512 607 aa10.78□□□□□ -0.68
SPCS3-202ENST00000507001 CTC1Q2NKJ3 1217 aa10.78□□□□□ -0.68
SPCS3-202ENST00000507001 ZBTB24O43167 697 aaPredicted RBP10.77□□□□□ -0.69
SPCS3-202ENST00000507001 SMCPP49901 116 aaPredicted RBP10.77□□□□□ -0.69
SPCS3-202ENST00000507001 CYP4X1Q8N118 509 aa10.77□□□□□ -0.69
SPCS3-202ENST00000507001 TULP1O00294 542 aaPredicted RBP10.76□□□□□ -0.69
SPCS3-202ENST00000507001 WNT7AO00755 349 aa10.74□□□□□ -0.69
SPCS3-202ENST00000507001 USP46P62068 366 aa10.74□□□□□ -0.69
SPCS3-202ENST00000507001 KDM4AO75164 1064 aa10.73□□□□□ -0.69
SPCS3-202ENST00000507001 AXIN1O15169 862 aa10.72□□□□□ -0.69
SPCS3-202ENST00000507001 DXOO77932 396 aaKnown RBP10.72□□□□□ -0.69
SPCS3-202ENST00000507001 IRF6O14896 467 aa10.71□□□□□ -0.69
SPCS3-202ENST00000507001 TRIM32Q13049 653 aa10.71□□□□□ -0.69
SPCS3-202ENST00000507001 LCE2AQ5TA79 106 aaPredicted RBP10.71□□□□□ -0.69
SPCS3-202ENST00000507001 TREML4Q6UXN2 200 aa10.71□□□□□ -0.69
SPCS3-202ENST00000507001 MINK1Q8N4C8 1332 aaPredicted RBP10.71□□□□□ -0.69
SPCS3-202ENST00000507001 USB1Q9BQ65 265 aaKnown RBP10.71□□□□□ -0.69
SPCS3-202ENST00000507001 TTC24A2A3L6 582 aaPredicted RBP10.69□□□□□ -0.7
SPCS3-202ENST00000507001 SNIP1Q8TAD8 396 aaKnown RBP10.69□□□□□ -0.7
SPCS3-202ENST00000507001 REPIN1Q9BWE0 567 aaKnown RBP10.68□□□□□ -0.7
SPCS3-202ENST00000507001 DACH1Q9UI36 760 aa10.68□□□□□ -0.7
SPCS3-202ENST00000507001 HOXA2O43364 376 aa10.67□□□□□ -0.7
SPCS3-202ENST00000507001 SMPD1P17405 629 aa10.66□□□□□ -0.7
SPCS3-202ENST00000507001 MDM2Q00987 491 aaPredicted RBP10.66□□□□□ -0.7
SPCS3-202ENST00000507001 GMPR2Q9P2T1 348 aaKnown RBP10.66□□□□□ -0.7
SPCS3-202ENST00000507001 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.65□□□□□ -0.7
SPCS3-202ENST00000507001 WNT7BP56706 349 aa10.64□□□□□ -0.71
SPCS3-202ENST00000507001 MRGPRX2Q96LB1 330 aa10.64□□□□□ -0.71
SPCS3-202ENST00000507001 GPCPD1Q9NPB8 672 aa10.64□□□□□ -0.71
SPCS3-202ENST00000507001 CLCN1P35523 988 aa10.63□□□□□ -0.71
SPCS3-202ENST00000507001 CCDC102AQ96A19 550 aa10.63□□□□□ -0.71
SPCS3-202ENST00000507001 C11orf95C9JLR9 678 aaPredicted RBP10.62□□□□□ -0.71
SPCS3-202ENST00000507001 HLA-CQ95604 372 aa10.61□□□□□ -0.71
SPCS3-202ENST00000507001 FAM217BQ9NTX9 383 aaPredicted RBP10.61□□□□□ -0.71
SPCS3-202ENST00000507001 JUNDP17535 347 aa10.6□□□□□ -0.71
SPCS3-202ENST00000507001 ATP13A2Q9NQ11 1180 aa10.59□□□□□ -0.71
SPCS3-202ENST00000507001 J3QL48 77 aa10.58□□□□□ -0.72
SPCS3-202ENST00000507001 SKOR1P84550 965 aa10.58□□□□□ -0.72
SPCS3-202ENST00000507001 WFS1O76024 890 aa10.57□□□□□ -0.72
SPCS3-202ENST00000507001 RC3H1Q5TC82 1133 aaKnown RBP10.57□□□□□ -0.72
SPCS3-202ENST00000507001 RETREG3Q86VR2 466 aa10.57□□□□□ -0.72
SPCS3-202ENST00000507001 CCDC24Q8N4L8 307 aa10.57□□□□□ -0.72
SPCS3-202ENST00000507001 SENP2Q9HC62 589 aa10.57□□□□□ -0.72
SPCS3-202ENST00000507001 NFX1Q12986 1120 aaKnown RBP10.56□□□□□ -0.72
SPCS3-202ENST00000507001 GUCA2AQ02747 115 aa10.55□□□□□ -0.72
SPCS3-202ENST00000507001 TRIM47Q96LD4 638 aa10.55□□□□□ -0.72
SPCS3-202ENST00000507001 NUTM1Q86Y26 1132 aa10.54□□□□□ -0.72
SPCS3-202ENST00000507001 WIPF1O43516 503 aa10.53□□□□□ -0.72
SPCS3-202ENST00000507001 HPS1Q92902 700 aa10.53□□□□□ -0.72
SPCS3-202ENST00000507001 KIFC2Q96AC6 838 aa10.53□□□□□ -0.72
SPCS3-202ENST00000507001 NUDT12Q9BQG2 462 aa10.53□□□□□ -0.72
SPCS3-202ENST00000507001 SYMPKQ92797 1274 aaKnown RBP10.51□□□□□ -0.73
SPCS3-202ENST00000507001 FDX1P10109 184 aa10.5□□□□□ -0.73
SPCS3-202ENST00000507001 KRI1Q8N9T8 703 aaKnown RBP10.5□□□□□ -0.73
SPCS3-202ENST00000507001 SIAH2O43255 324 aa10.49□□□□□ -0.73
SPCS3-202ENST00000507001 SNRPBP14678 240 aaKnown RBP10.49□□□□□ -0.73
SPCS3-202ENST00000507001 ZC3H15Q8WU90 426 aaKnown RBP10.48□□□□□ -0.73
SPCS3-202ENST00000507001 PCDHGC3Q9UN70 934 aa10.48□□□□□ -0.73
SPCS3-202ENST00000507001 TERTO14746 1132 aaKnown RBP10.47□□□□□ -0.73
SPCS3-202ENST00000507001 ALDH1A1P00352 501 aa10.47□□□□□ -0.73
SPCS3-202ENST00000507001 CCNYL3P0C7X3 344 aa10.47□□□□□ -0.73
SPCS3-202ENST00000507001 MS4A1P11836 297 aa10.47□□□□□ -0.73
SPCS3-202ENST00000507001 PTPRNQ16849 979 aa10.47□□□□□ -0.73
SPCS3-202ENST00000507001 PTCRAQ6ISU1 281 aaPredicted RBP10.47□□□□□ -0.73
SPCS3-202ENST00000507001 EHBP1Q8NDI1 1231 aa10.46□□□□□ -0.73
SPCS3-202ENST00000507001 STK17AQ9UEE5 414 aa10.46□□□□□ -0.73
SPCS3-202ENST00000507001 C6orf229H3BNL8 230 aa10.45□□□□□ -0.74
SPCS3-202ENST00000507001 SSTR3P32745 418 aaPredicted RBP10.45□□□□□ -0.74
SPCS3-202ENST00000507001 INSM1Q01101 510 aaPredicted RBP10.45□□□□□ -0.74
SPCS3-202ENST00000507001 SPIRE2Q8WWL2 714 aa10.45□□□□□ -0.74
SPCS3-202ENST00000507001 AMHR2Q16671 573 aa10.44□□□□□ -0.74
SPCS3-202ENST00000507001 DESI1Q6ICB0 168 aa10.44□□□□□ -0.74
SPCS3-202ENST00000507001 SPDYE5A6NIY4 337 aa10.43□□□□□ -0.74
SPCS3-202ENST00000507001 SH3BP2P78314 561 aa10.43□□□□□ -0.74
SPCS3-202ENST00000507001 EVA1BQ9NVM1 165 aa10.43□□□□□ -0.74
SPCS3-202ENST00000507001 ZMYND10O75800 440 aa10.42□□□□□ -0.74
SPCS3-202ENST00000507001 GJA5P36382 358 aa10.42□□□□□ -0.74
SPCS3-202ENST00000507001 LCE2CQ5TA81 110 aa10.42□□□□□ -0.74
SPCS3-202ENST00000507001 BARGINQ6ZT62 677 aa10.42□□□□□ -0.74
SPCS3-202ENST00000507001 MPNDQ8N594 471 aa10.42□□□□□ -0.74
SPCS3-202ENST00000507001 UNC93B1Q9H1C4 597 aa10.41□□□□□ -0.74
SPCS3-202ENST00000507001 WASF2Q9Y6W5 498 aa10.41□□□□□ -0.74
SPCS3-202ENST00000507001 KCNH2Q12809 1159 aa10.4□□□□□ -0.74
SPCS3-202ENST00000507001 MOXD2PA6NHM9 499 aa10.39□□□□□ -0.75
SPCS3-202ENST00000507001 MTMR2Q13614 643 aa10.39□□□□□ -0.75
SPCS3-202ENST00000507001 TTLL12Q14166 644 aaPredicted RBP10.39□□□□□ -0.75
SPCS3-202ENST00000507001 NPAS3Q8IXF0 933 aa10.39□□□□□ -0.75
SPCS3-202ENST00000507001 PRR7Q8TB68 274 aa10.39□□□□□ -0.75
SPCS3-202ENST00000507001 CAPN5O15484 640 aaPredicted RBP10.38□□□□□ -0.75
SPCS3-202ENST00000507001 NDUFV2P19404 249 aa10.38□□□□□ -0.75
SPCS3-202ENST00000507001 DIXDC1Q155Q3 683 aa10.38□□□□□ -0.75
SPCS3-202ENST00000507001 VARSP26640 1264 aaKnown RBP10.37□□□□□ -0.75
SPCS3-202ENST00000507001 GIGYF2Q6Y7W6 1299 aaKnown RBP10.37□□□□□ -0.75
SPCS3-202ENST00000507001 TRIM46Q7Z4K8 759 aa10.37□□□□□ -0.75
SPCS3-202ENST00000507001 PLEKHG3A1L390 1219 aa10.36□□□□□ -0.75
SPCS3-202ENST00000507001 ZNF511Q8NB15 262 aa10.36□□□□□ -0.75
SPCS3-202ENST00000507001 SLC16A10Q8TF71 515 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms