RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 CTDSPL2Q05D32 466 aa10.75□□□□□ -0.69
AP001960.1-201ENST00000506494 IRF5Q13568 498 aa10.75□□□□□ -0.69
AP001960.1-201ENST00000506494 SWT1Q5T5J6 900 aaKnown RBP10.75□□□□□ -0.69
AP001960.1-201ENST00000506494 RFX1P22670 979 aa10.74□□□□□ -0.69
AP001960.1-201ENST00000506494 GUCA2AQ02747 115 aa10.74□□□□□ -0.69
AP001960.1-201ENST00000506494 TMCO4Q5TGY1 634 aa10.74□□□□□ -0.69
AP001960.1-201ENST00000506494 HMX1Q9NP08 348 aaPredicted RBP10.74□□□□□ -0.69
AP001960.1-201ENST00000506494 PCDHGC3Q9UN70 934 aa10.74□□□□□ -0.69
AP001960.1-201ENST00000506494 C6orf229H3BNL8 230 aa10.73□□□□□ -0.69
AP001960.1-201ENST00000506494 CSB-PGBD3P0DP91 1061 aa10.73□□□□□ -0.69
AP001960.1-201ENST00000506494 SLC10A3P09131 477 aa10.72□□□□□ -0.69
AP001960.1-201ENST00000506494 HOXB1P14653 301 aaPredicted RBP10.72□□□□□ -0.69
AP001960.1-201ENST00000506494 VAC14Q08AM6 782 aa10.72□□□□□ -0.69
AP001960.1-201ENST00000506494 GZF1Q9H116 711 aaPredicted RBP10.72□□□□□ -0.69
AP001960.1-201ENST00000506494 HLA-CQ95604 372 aa10.71□□□□□ -0.69
AP001960.1-201ENST00000506494 MARVELD3Q96A59 401 aa10.71□□□□□ -0.69
AP001960.1-201ENST00000506494 TRIM34Q9BYJ4 488 aa10.71□□□□□ -0.69
AP001960.1-201ENST00000506494 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.7□□□□□ -0.7
AP001960.1-201ENST00000506494 ADAMTS19Q8TE59 1207 aa10.7□□□□□ -0.7
AP001960.1-201ENST00000506494 LRRN4Q8WUT4 740 aa10.7□□□□□ -0.7
AP001960.1-201ENST00000506494 ZBED2Q9BTP6 218 aa10.7□□□□□ -0.7
AP001960.1-201ENST00000506494 USTQ9Y2C2 406 aa10.7□□□□□ -0.7
AP001960.1-201ENST00000506494 SLF2Q8IX21 1173 aa10.69□□□□□ -0.7
AP001960.1-201ENST00000506494 PPP1R12CQ9BZL4 782 aa10.69□□□□□ -0.7
AP001960.1-201ENST00000506494 SOX11P35716 441 aa10.68□□□□□ -0.7
AP001960.1-201ENST00000506494 PNMA1Q8ND90 353 aa10.68□□□□□ -0.7
AP001960.1-201ENST00000506494 RABGEF1Q9UJ41 708 aa10.68□□□□□ -0.7
AP001960.1-201ENST00000506494 CFAP99D6REC4 459 aa10.67□□□□□ -0.7
AP001960.1-201ENST00000506494 CFAP70Q5T0N1 1121 aa10.67□□□□□ -0.7
AP001960.1-201ENST00000506494 SEPT9Q9UHD8 586 aaPredicted RBP10.67□□□□□ -0.7
AP001960.1-201ENST00000506494 FUT2Q10981 343 aa10.66□□□□□ -0.7
AP001960.1-201ENST00000506494 BRD1O95696 1058 aa10.65□□□□□ -0.7
AP001960.1-201ENST00000506494 CFHP08603 1231 aa10.65□□□□□ -0.7
AP001960.1-201ENST00000506494 ALG2Q9H553 416 aa10.65□□□□□ -0.7
AP001960.1-201ENST00000506494 PALM3A6NDB9 673 aaPredicted RBP10.64□□□□□ -0.71
AP001960.1-201ENST00000506494 GPR37L1O60883 481 aa10.64□□□□□ -0.71
AP001960.1-201ENST00000506494 RNF40O75150 1001 aa10.64□□□□□ -0.71
AP001960.1-201ENST00000506494 LMOD1P29536 600 aaPredicted RBP10.64□□□□□ -0.71
AP001960.1-201ENST00000506494 ATP6V1AP38606 617 aa10.64□□□□□ -0.71
AP001960.1-201ENST00000506494 MFAP1P55081 439 aaKnown RBP10.64□□□□□ -0.71
AP001960.1-201ENST00000506494 KCNA1Q09470 495 aa10.64□□□□□ -0.71
AP001960.1-201ENST00000506494 SEMA3FQ13275 785 aa10.64□□□□□ -0.71
AP001960.1-201ENST00000506494 FAM98CQ17RN3 349 aaKnown RBP10.64□□□□□ -0.71
AP001960.1-201ENST00000506494 PSEN2P49810 448 aa10.63□□□□□ -0.71
AP001960.1-201ENST00000506494 EMP3P54852 163 aa10.63□□□□□ -0.71
AP001960.1-201ENST00000506494 PRR7Q8TB68 274 aa10.63□□□□□ -0.71
AP001960.1-201ENST00000506494 KMT5BQ4FZB7 885 aa10.62□□□□□ -0.71
AP001960.1-201ENST00000506494 EPS8L1Q8TE68 723 aa10.62□□□□□ -0.71
AP001960.1-201ENST00000506494 ARHGAP33O14559 1287 aa10.61□□□□□ -0.71
AP001960.1-201ENST00000506494 NR6A1Q15406 480 aa10.61□□□□□ -0.71
AP001960.1-201ENST00000506494 SAMD7Q7Z3H4 446 aa10.61□□□□□ -0.71
AP001960.1-201ENST00000506494 SLC4A5Q9BY07 1137 aa10.61□□□□□ -0.71
AP001960.1-201ENST00000506494 TFIP11Q9UBB9 837 aaKnown RBP10.61□□□□□ -0.71
AP001960.1-201ENST00000506494 EIF4G2P78344 907 aaKnown RBP eCLIP10.6□□□□□ -0.71
AP001960.1-201ENST00000506494 SYMPKQ92797 1274 aaKnown RBP10.6□□□□□ -0.71
AP001960.1-201ENST00000506494 SRPK2P78362 688 aaKnown RBP10.59□□□□□ -0.71
AP001960.1-201ENST00000506494 RETREG3Q86VR2 466 aa10.59□□□□□ -0.71
AP001960.1-201ENST00000506494 RGS22Q8NE09 1264 aa10.58□□□□□ -0.72
AP001960.1-201ENST00000506494 MTMR7Q9Y216 660 aa10.58□□□□□ -0.72
AP001960.1-201ENST00000506494 Q3C1V9 767 aa10.57□□□□□ -0.72
AP001960.1-201ENST00000506494 LAPTM4BQ86VI4 370 aa10.57□□□□□ -0.72
AP001960.1-201ENST00000506494 UCN2Q96RP3 112 aa10.57□□□□□ -0.72
AP001960.1-201ENST00000506494 NBPF3Q9H094 633 aa10.57□□□□□ -0.72
AP001960.1-201ENST00000506494 PER1O15534 1290 aaPredicted RBP10.55□□□□□ -0.72
AP001960.1-201ENST00000506494 ATG7O95352 703 aa10.55□□□□□ -0.72
AP001960.1-201ENST00000506494 CDCA8Q53HL2 280 aa10.55□□□□□ -0.72
AP001960.1-201ENST00000506494 MAFBQ9Y5Q3 323 aaPredicted RBP10.55□□□□□ -0.72
AP001960.1-201ENST00000506494 ERBB3P21860 1342 aa10.55□□□□□ -0.72
AP001960.1-201ENST00000506494 DESI1Q6ICB0 168 aa10.54□□□□□ -0.72
AP001960.1-201ENST00000506494 VRTNQ9H8Y1 702 aa10.53□□□□□ -0.72
AP001960.1-201ENST00000506494 CARNS1A5YM72 827 aa10.52□□□□□ -0.73
AP001960.1-201ENST00000506494 FAM205CA6NFA0 338 aa10.52□□□□□ -0.73
AP001960.1-201ENST00000506494 ATP9BO43861 1147 aa10.52□□□□□ -0.73
AP001960.1-201ENST00000506494 PBX2P40425 430 aa10.52□□□□□ -0.73
AP001960.1-201ENST00000506494 NR1H3Q13133 447 aa10.52□□□□□ -0.73
AP001960.1-201ENST00000506494 VARS2Q5ST30 1063 aaKnown RBP10.52□□□□□ -0.73
AP001960.1-201ENST00000506494 MORN1Q5T089 497 aa10.52□□□□□ -0.73
AP001960.1-201ENST00000506494 DMRTA1Q5VZB9 504 aa10.52□□□□□ -0.73
AP001960.1-201ENST00000506494 TBC1D9Q6ZT07 1266 aa10.52□□□□□ -0.73
AP001960.1-201ENST00000506494 PRR14Q9BWN1 585 aa10.52□□□□□ -0.73
AP001960.1-201ENST00000506494 VPS9D1Q9Y2B5 631 aa10.52□□□□□ -0.73
AP001960.1-201ENST00000506494 PUS10Q3MIT2 529 aaKnown RBP10.51□□□□□ -0.73
AP001960.1-201ENST00000506494 B4GALNT3Q6L9W6 998 aa10.51□□□□□ -0.73
AP001960.1-201ENST00000506494 SLC27A5Q9Y2P5 690 aa10.51□□□□□ -0.73
AP001960.1-201ENST00000506494 AXIN2Q9Y2T1 843 aa10.51□□□□□ -0.73
AP001960.1-201ENST00000506494 ACTN4O43707 911 aaKnown RBP10.5□□□□□ -0.73
AP001960.1-201ENST00000506494 LYPD8Q6UX82 237 aa10.5□□□□□ -0.73
AP001960.1-201ENST00000506494 HS3ST6Q96QI5 342 aa10.5□□□□□ -0.73
AP001960.1-201ENST00000506494 IVNS1ABPQ9Y6Y0 642 aa10.5□□□□□ -0.73
AP001960.1-201ENST00000506494 FOXD4L5Q5VV16 416 aaPredicted RBP10.49□□□□□ -0.73
AP001960.1-201ENST00000506494 FOXD4L4Q8WXT5 416 aaPredicted RBP10.49□□□□□ -0.73
AP001960.1-201ENST00000506494 LRCH3Q96II8 777 aa10.49□□□□□ -0.73
AP001960.1-201ENST00000506494 ZFRQ96KR1 1074 aaKnown RBP10.49□□□□□ -0.73
AP001960.1-201ENST00000506494 ZBBXA8MT70 800 aa10.48□□□□□ -0.73
AP001960.1-201ENST00000506494 TMEM88BA6NKF7 163 aa10.47□□□□□ -0.73
AP001960.1-201ENST00000506494 CCDC27Q2M243 656 aa10.47□□□□□ -0.73
AP001960.1-201ENST00000506494 POTEEQ6S8J3 1075 aa10.47□□□□□ -0.73
AP001960.1-201ENST00000506494 MRPL50Q8N5N7 158 aaKnown RBP10.47□□□□□ -0.73
AP001960.1-201ENST00000506494 FKBPLQ9UIM3 349 aa10.47□□□□□ -0.73
AP001960.1-201ENST00000506494 FBXO45P0C2W1 286 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms