RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 L3MBTL2Q969R5 705 aa11.15□□□□□ -0.62
SKP2-203ENST00000504386 TIMELESSQ9UNS1 1208 aa11.15□□□□□ -0.62
SKP2-203ENST00000504386 CDC42BPGQ6DT37 1551 aa11.15□□□□□ -0.62
SKP2-203ENST00000504386 KIAA1210Q9ULL0 1709 aa11.15□□□□□ -0.63
SKP2-203ENST00000504386 SIN3AQ96ST3 1273 aa11.14□□□□□ -0.63
SKP2-203ENST00000504386 ASXL1Q8IXJ9 1541 aa11.14□□□□□ -0.63
SKP2-203ENST00000504386 ADGRB1O14514 1584 aa11.13□□□□□ -0.63
SKP2-203ENST00000504386 MST1RQ04912 1400 aa11.13□□□□□ -0.63
SKP2-203ENST00000504386 PRAM1Q96QH2 718 aa11.13□□□□□ -0.63
SKP2-203ENST00000504386 ROBO1Q9Y6N7 1651 aa11.12□□□□□ -0.63
SKP2-203ENST00000504386 KCNA4P22459 653 aa11.12□□□□□ -0.63
SKP2-203ENST00000504386 TRAK1Q9UPV9 953 aa11.12□□□□□ -0.63
SKP2-203ENST00000504386 C1orf167Q5SNV9 1468 aa11.12□□□□□ -0.63
SKP2-203ENST00000504386 BRINP3Q76B58 766 aa11.11□□□□□ -0.63
SKP2-203ENST00000504386 WAPLQ7Z5K2 1190 aa11.11□□□□□ -0.63
SKP2-203ENST00000504386 NALCNQ8IZF0 1738 aa11.1□□□□□ -0.63
SKP2-203ENST00000504386 SLC24A1O60721 1099 aa11.1□□□□□ -0.63
SKP2-203ENST00000504386 CNKSR2Q8WXI2 1034 aa11.1□□□□□ -0.63
SKP2-203ENST00000504386 ROCK2O75116 1388 aaKnown RBP11.1□□□□□ -0.63
SKP2-203ENST00000504386 JCADQ9P266 1359 aa11.1□□□□□ -0.63
SKP2-203ENST00000504386 NPHP3Q7Z494 1330 aa11.09□□□□□ -0.63
SKP2-203ENST00000504386 ANKARQ7Z5J8 1434 aa11.09□□□□□ -0.63
SKP2-203ENST00000504386 AHDC1Q5TGY3 1603 aaPredicted RBP11.09□□□□□ -0.63
SKP2-203ENST00000504386 CCER1Q8TC90 406 aaPredicted RBP11.09□□□□□ -0.63
SKP2-203ENST00000504386 LRRC59Q96AG4 307 aaKnown RBP11.09□□□□□ -0.63
SKP2-203ENST00000504386 ESCO1Q5FWF5 840 aa11.08□□□□□ -0.64
SKP2-203ENST00000504386 SPATA31A6Q5VVP1 1343 aa11.08□□□□□ -0.64
SKP2-203ENST00000504386 CENPJQ9HC77 1338 aaPredicted RBP11.08□□□□□ -0.64
SKP2-203ENST00000504386 ADGRB2O60241 1585 aa11.07□□□□□ -0.64
SKP2-203ENST00000504386 PLEKHH1Q9ULM0 1364 aa11.07□□□□□ -0.64
SKP2-203ENST00000504386 SAFB2Q14151 953 aaKnown RBP eCLIP11.07□□□□□ -0.64
SKP2-203ENST00000504386 PHLPP1O60346 1717 aa11.06□□□□□ -0.64
SKP2-203ENST00000504386 GPRASP1Q5JY77 1395 aa11.06□□□□□ -0.64
SKP2-203ENST00000504386 MINK1Q8N4C8 1332 aaPredicted RBP11.06□□□□□ -0.64
SKP2-203ENST00000504386 WASLO00401 505 aaPredicted RBP11.05□□□□□ -0.64
SKP2-203ENST00000504386 PSME1Q06323 249 aa11.05□□□□□ -0.64
SKP2-203ENST00000504386 NBPF1Q3BBV0 1214 aa11.05□□□□□ -0.64
SKP2-203ENST00000504386 CARD11Q9BXL7 1154 aa11.05□□□□□ -0.64
SKP2-203ENST00000504386 KIF1AQ12756 1690 aa11.04□□□□□ -0.64
SKP2-203ENST00000504386 PHF8Q9UPP1 1060 aa11.04□□□□□ -0.64
SKP2-203ENST00000504386 RALGAPBQ86X10 1494 aa11.04□□□□□ -0.64
SKP2-203ENST00000504386 TULP4Q9NRJ4 1543 aa11.04□□□□□ -0.64
SKP2-203ENST00000504386 FMN2Q9NZ56 1722 aa11.04□□□□□ -0.64
SKP2-203ENST00000504386 DISP3Q9P2K9 1392 aa11.03□□□□□ -0.64
SKP2-203ENST00000504386 TRPM1Q7Z4N2 1603 aa11.03□□□□□ -0.64
SKP2-203ENST00000504386 ORAI2Q96SN7 254 aa11.03□□□□□ -0.64
SKP2-203ENST00000504386 ARHGEF28Q8N1W1 1705 aaKnown RBP11.03□□□□□ -0.64
SKP2-203ENST00000504386 SOS2Q07890 1332 aaPredicted RBP11.03□□□□□ -0.64
SKP2-203ENST00000504386 EVC2Q86UK5 1308 aa11.03□□□□□ -0.64
SKP2-203ENST00000504386 COL16A1Q07092 1604 aaPredicted RBP11.02□□□□□ -0.64
SKP2-203ENST00000504386 NHSL1Q5SYE7 1610 aa11.02□□□□□ -0.64
SKP2-203ENST00000504386 HIRIP3Q9BW71 556 aaPredicted RBP11.02□□□□□ -0.65
SKP2-203ENST00000504386 SBNO2Q9Y2G9 1366 aa11.02□□□□□ -0.65
SKP2-203ENST00000504386 FOXO3O43524 673 aa11.01□□□□□ -0.65
SKP2-203ENST00000504386 SRPK2P78362 688 aaKnown RBP11.01□□□□□ -0.65
SKP2-203ENST00000504386 MEX3CQ5U5Q3 659 aaKnown RBP11.01□□□□□ -0.65
SKP2-203ENST00000504386 CCDC61Q9Y6R9 512 aa11.01□□□□□ -0.65
SKP2-203ENST00000504386 MED1Q15648 1581 aaPredicted RBP11□□□□□ -0.65
SKP2-203ENST00000504386 NUTM2FA1L443 756 aa11□□□□□ -0.65
SKP2-203ENST00000504386 CACNB1Q02641 598 aaPredicted RBP11□□□□□ -0.65
SKP2-203ENST00000504386 NBPF8Q3BBV2 869 aa11□□□□□ -0.65
SKP2-203ENST00000504386 NGDNQ8NEJ9 315 aaKnown RBP11□□□□□ -0.65
SKP2-203ENST00000504386 CDK19Q9BWU1 502 aa11□□□□□ -0.65
SKP2-203ENST00000504386 SBNO1A3KN83 1393 aa11□□□□□ -0.65
SKP2-203ENST00000504386 ARHGEF10O15013 1369 aa11□□□□□ -0.65
SKP2-203ENST00000504386 SHPRHQ149N8 1683 aa10.99□□□□□ -0.65
SKP2-203ENST00000504386 NUDT16Q96DE0 195 aaKnown RBP10.99□□□□□ -0.65
SKP2-203ENST00000504386 BRD4O60885 1362 aaPredicted RBP10.99□□□□□ -0.65
SKP2-203ENST00000504386 ATAD2Q6PL18 1390 aa10.99□□□□□ -0.65
SKP2-203ENST00000504386 KRT28Q7Z3Y7 464 aa10.98□□□□□ -0.65
SKP2-203ENST00000504386 PNPLA6Q8IY17 1366 aa10.98□□□□□ -0.65
SKP2-203ENST00000504386 CDCA8Q53HL2 280 aa10.97□□□□□ -0.65
SKP2-203ENST00000504386 PUS7Q96PZ0 661 aaKnown RBP10.97□□□□□ -0.65
SKP2-203ENST00000504386 PXDNQ92626 1479 aa10.97□□□□□ -0.65
SKP2-203ENST00000504386 ITSN1Q15811 1721 aa10.97□□□□□ -0.65
SKP2-203ENST00000504386 ATP7BP35670 1465 aa10.96□□□□□ -0.65
SKP2-203ENST00000504386 TNS3Q68CZ2 1445 aa10.96□□□□□ -0.65
SKP2-203ENST00000504386 SPATA31A3Q5VYP0 1347 aa10.96□□□□□ -0.65
SKP2-203ENST00000504386 PLEKHG3A1L390 1219 aa10.96□□□□□ -0.65
SKP2-203ENST00000504386 HAP1P54257 671 aaPredicted RBP10.96□□□□□ -0.65
SKP2-203ENST00000504386 ZNF772Q68DY9 489 aaPredicted RBP10.96□□□□□ -0.65
SKP2-203ENST00000504386 QRICH2Q9H0J4 1663 aa10.95□□□□□ -0.66
SKP2-203ENST00000504386 DDX17Q92841 729 aaKnown RBP10.95□□□□□ -0.66
SKP2-203ENST00000504386 ZNF692Q9BU19 519 aaPredicted RBP10.95□□□□□ -0.66
SKP2-203ENST00000504386 POLR3AO14802 1390 aaPredicted RBP10.94□□□□□ -0.66
SKP2-203ENST00000504386 NINLQ9Y2I6 1382 aa10.94□□□□□ -0.66
SKP2-203ENST00000504386 PRR36Q9H6K5 1346 aa10.94□□□□□ -0.66
SKP2-203ENST00000504386 NUTM2BA6NNL0 878 aaPredicted RBP10.94□□□□□ -0.66
SKP2-203ENST00000504386 NUTM2EB1AL46 878 aaPredicted RBP10.94□□□□□ -0.66
SKP2-203ENST00000504386 NPM3O75607 178 aaKnown RBP10.94□□□□□ -0.66
SKP2-203ENST00000504386 NUTM2AQ8IVF1 878 aaPredicted RBP10.94□□□□□ -0.66
SKP2-203ENST00000504386 PMFBP1Q8TBY8 1022 aa10.94□□□□□ -0.66
SKP2-203ENST00000504386 PPIP5K1Q6PFW1 1433 aa10.93□□□□□ -0.66
SKP2-203ENST00000504386 USP47Q96K76 1375 aa10.93□□□□□ -0.66
SKP2-203ENST00000504386 XPCQ01831 940 aaPredicted RBP10.93□□□□□ -0.66
SKP2-203ENST00000504386 LMOD2Q6P5Q4 547 aa10.93□□□□□ -0.66
SKP2-203ENST00000504386 USP32Q8NFA0 1604 aa10.92□□□□□ -0.66
SKP2-203ENST00000504386 COL22A1Q8NFW1 1626 aaPredicted RBP10.92□□□□□ -0.66
SKP2-203ENST00000504386 ACEP12821 1306 aa10.92□□□□□ -0.66
SKP2-203ENST00000504386 PAK3O75914 559 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms