RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 RGPD8O14715 1765 aaPredicted RBP20.06■□□□□ 0.8
HOXC6-203ENST00000504315 SPATA31A6Q5VVP1 1343 aa20.05■□□□□ 0.8
HOXC6-203ENST00000504315 CFAP70Q5T0N1 1121 aa20.05■□□□□ 0.8
HOXC6-203ENST00000504315 RGS17Q9UGC6 210 aaPredicted RBP20.05■□□□□ 0.8
HOXC6-203ENST00000504315 DHX57Q6P158 1386 aaKnown RBP20.05■□□□□ 0.8
HOXC6-203ENST00000504315 PLEKHH1Q9ULM0 1364 aa20.05■□□□□ 0.8
HOXC6-203ENST00000504315 LRP6O75581 1613 aa20.05■□□□□ 0.8
HOXC6-203ENST00000504315 KIAA1210Q9ULL0 1709 aa20.04■□□□□ 0.8
HOXC6-203ENST00000504315 STK26Q9P289 416 aa20.03■□□□□ 0.8
HOXC6-203ENST00000504315 WAPLQ7Z5K2 1190 aa20.02■□□□□ 0.8
HOXC6-203ENST00000504315 ADGRB2O60241 1585 aa20.01■□□□□ 0.79
HOXC6-203ENST00000504315 ARHGEF28Q8N1W1 1705 aaKnown RBP20.01■□□□□ 0.79
HOXC6-203ENST00000504315 KIF1AQ12756 1690 aa20■□□□□ 0.79
HOXC6-203ENST00000504315 DCAF11Q8TEB1 546 aa20■□□□□ 0.79
HOXC6-203ENST00000504315 ORAI2Q96SN7 254 aa19.99■□□□□ 0.79
HOXC6-203ENST00000504315 SOS2Q07890 1332 aaPredicted RBP19.99■□□□□ 0.79
HOXC6-203ENST00000504315 COL22A1Q8NFW1 1626 aaPredicted RBP19.98■□□□□ 0.79
HOXC6-203ENST00000504315 DDX17Q92841 729 aaKnown RBP19.98■□□□□ 0.79
HOXC6-203ENST00000504315 LRRC59Q96AG4 307 aaKnown RBP19.98■□□□□ 0.79
HOXC6-203ENST00000504315 PNPLA6Q8IY17 1366 aa19.97■□□□□ 0.79
HOXC6-203ENST00000504315 PXDNQ92626 1479 aa19.96■□□□□ 0.79
HOXC6-203ENST00000504315 KDM2AQ9Y2K7 1162 aa19.95■□□□□ 0.78
HOXC6-203ENST00000504315 USP32Q8NFA0 1604 aa19.94■□□□□ 0.78
HOXC6-203ENST00000504315 MARF1Q9Y4F3 1742 aaKnown RBP19.93■□□□□ 0.78
HOXC6-203ENST00000504315 PRAM1Q96QH2 718 aa19.93■□□□□ 0.78
HOXC6-203ENST00000504315 NPHP3Q7Z494 1330 aa19.92■□□□□ 0.78
HOXC6-203ENST00000504315 ESCO1Q5FWF5 840 aa19.91■□□□□ 0.78
HOXC6-203ENST00000504315 POTEAQ6S8J7 498 aa19.91■□□□□ 0.78
HOXC6-203ENST00000504315 ANKARQ7Z5J8 1434 aa19.89■□□□□ 0.77
HOXC6-203ENST00000504315 TRAK1Q9UPV9 953 aa19.88■□□□□ 0.77
HOXC6-203ENST00000504315 ITSN1Q15811 1721 aa19.88■□□□□ 0.77
HOXC6-203ENST00000504315 POGKQ9P215 609 aa19.87■□□□□ 0.77
HOXC6-203ENST00000504315 NUTM2FA1L443 756 aa19.86■□□□□ 0.77
HOXC6-203ENST00000504315 MEX3CQ5U5Q3 659 aaKnown RBP19.86■□□□□ 0.77
HOXC6-203ENST00000504315 TULP4Q9NRJ4 1543 aa19.86■□□□□ 0.77
HOXC6-203ENST00000504315 FOXO3O43524 673 aa19.85■□□□□ 0.77
HOXC6-203ENST00000504315 SAFB2Q14151 953 aaKnown RBP eCLIP19.85■□□□□ 0.77
HOXC6-203ENST00000504315 TRPM1Q7Z4N2 1603 aa19.84■□□□□ 0.77
HOXC6-203ENST00000504315 NUTM2BA6NNL0 878 aaPredicted RBP19.84■□□□□ 0.77
HOXC6-203ENST00000504315 NUTM2EB1AL46 878 aaPredicted RBP19.84■□□□□ 0.77
HOXC6-203ENST00000504315 ZNF772Q68DY9 489 aaPredicted RBP19.84■□□□□ 0.77
HOXC6-203ENST00000504315 NUTM2AQ8IVF1 878 aaPredicted RBP19.84■□□□□ 0.77
HOXC6-203ENST00000504315 TRPM3Q9HCF6 1732 aaPredicted RBP19.83■□□□□ 0.77
HOXC6-203ENST00000504315 EIF3AQ14152 1382 aaKnown RBP19.83■□□□□ 0.76
HOXC6-203ENST00000504315 ABCA3Q99758 1704 aa19.82■□□□□ 0.76
HOXC6-203ENST00000504315 TOPAZ1Q8N9V7 1692 aa19.81■□□□□ 0.76
HOXC6-203ENST00000504315 PHF8Q9UPP1 1060 aa19.81■□□□□ 0.76
HOXC6-203ENST00000504315 ALS2Q96Q42 1657 aa19.79■□□□□ 0.76
HOXC6-203ENST00000504315 QRICH2Q9H0J4 1663 aa19.79■□□□□ 0.76
HOXC6-203ENST00000504315 XPCQ01831 940 aaPredicted RBP19.79■□□□□ 0.76
HOXC6-203ENST00000504315 L3MBTL2Q969R5 705 aa19.79■□□□□ 0.76
HOXC6-203ENST00000504315 AFF2P51816 1311 aa19.78■□□□□ 0.76
HOXC6-203ENST00000504315 SPATA31A3Q5VYP0 1347 aa19.78■□□□□ 0.76
HOXC6-203ENST00000504315 MINK1Q8N4C8 1332 aaPredicted RBP19.78■□□□□ 0.76
HOXC6-203ENST00000504315 TNS3Q68CZ2 1445 aa19.78■□□□□ 0.76
HOXC6-203ENST00000504315 WASLO00401 505 aaPredicted RBP19.78■□□□□ 0.76
HOXC6-203ENST00000504315 NBPF1Q3BBV0 1214 aa19.78■□□□□ 0.76
HOXC6-203ENST00000504315 SIN3AQ96ST3 1273 aa19.78■□□□□ 0.76
HOXC6-203ENST00000504315 HIRIP3Q9BW71 556 aaPredicted RBP19.78■□□□□ 0.76
HOXC6-203ENST00000504315 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.78■□□□□ 0.76
HOXC6-203ENST00000504315 ATP7BP35670 1465 aa19.78■□□□□ 0.76
HOXC6-203ENST00000504315 PRR36Q9H6K5 1346 aa19.77■□□□□ 0.76
HOXC6-203ENST00000504315 TRIM26Q12899 539 aaPredicted RBP19.77■□□□□ 0.76
HOXC6-203ENST00000504315 C8orf37Q96NL8 207 aa19.77■□□□□ 0.76
HOXC6-203ENST00000504315 SBNO1A3KN83 1393 aa19.77■□□□□ 0.76
HOXC6-203ENST00000504315 CDK12Q9NYV4 1490 aaPredicted RBP19.77■□□□□ 0.76
HOXC6-203ENST00000504315 KRT28Q7Z3Y7 464 aa19.75■□□□□ 0.75
HOXC6-203ENST00000504315 CRYBG1Q9Y4K1 1723 aa19.75■□□□□ 0.75
HOXC6-203ENST00000504315 ADAMTS2O95450 1211 aa19.73■□□□□ 0.75
HOXC6-203ENST00000504315 PSME1Q06323 249 aa19.73■□□□□ 0.75
HOXC6-203ENST00000504315 FNBP4Q8N3X1 1017 aaPredicted RBP19.72■□□□□ 0.75
HOXC6-203ENST00000504315 NWD2Q9ULI1 1742 aa19.71■□□□□ 0.75
HOXC6-203ENST00000504315 ARHGEF10O15013 1369 aa19.7■□□□□ 0.74
HOXC6-203ENST00000504315 RXRBP28702 533 aa19.7■□□□□ 0.74
HOXC6-203ENST00000504315 NEUROD1Q13562 356 aa19.7■□□□□ 0.74
HOXC6-203ENST00000504315 PMFBP1Q8TBY8 1022 aa19.7■□□□□ 0.74
HOXC6-203ENST00000504315 NGLY1Q96IV0 654 aa19.7■□□□□ 0.74
HOXC6-203ENST00000504315 PLCH1Q4KWH8 1693 aa19.69■□□□□ 0.74
HOXC6-203ENST00000504315 ATRNO75882 1429 aa19.68■□□□□ 0.74
HOXC6-203ENST00000504315 BCL9LQ86UU0 1499 aa19.68■□□□□ 0.74
HOXC6-203ENST00000504315 CENPJQ9HC77 1338 aaPredicted RBP19.68■□□□□ 0.74
HOXC6-203ENST00000504315 GPRASP1Q5JY77 1395 aa19.68■□□□□ 0.74
HOXC6-203ENST00000504315 SLIT2O94813 1529 aa19.67■□□□□ 0.74
HOXC6-203ENST00000504315 NUDT16Q96DE0 195 aaKnown RBP19.67■□□□□ 0.74
HOXC6-203ENST00000504315 CDK19Q9BWU1 502 aa19.67■□□□□ 0.74
HOXC6-203ENST00000504315 QTRT2Q9H974 415 aaKnown RBP19.67■□□□□ 0.74
HOXC6-203ENST00000504315 POLR3AO14802 1390 aaPredicted RBP19.67■□□□□ 0.74
HOXC6-203ENST00000504315 RBM6P78332 1123 aaKnown RBP19.66■□□□□ 0.74
HOXC6-203ENST00000504315 USP21Q9UK80 565 aa19.66■□□□□ 0.74
HOXC6-203ENST00000504315 RGS12O14924 1447 aa19.66■□□□□ 0.74
HOXC6-203ENST00000504315 ROCK2O75116 1388 aaKnown RBP19.65■□□□□ 0.74
HOXC6-203ENST00000504315 TRPC5Q9UL62 973 aaPredicted RBP19.64■□□□□ 0.73
HOXC6-203ENST00000504315 NRAPQ86VF7 1730 aa19.63■□□□□ 0.73
HOXC6-203ENST00000504315 PHRF1Q9P1Y6 1649 aaKnown RBP19.63■□□□□ 0.73
HOXC6-203ENST00000504315 NBPF8Q3BBV2 869 aa19.63■□□□□ 0.73
HOXC6-203ENST00000504315 CCDC61Q9Y6R9 512 aa19.63■□□□□ 0.73
HOXC6-203ENST00000504315 NGDNQ8NEJ9 315 aaKnown RBP19.62■□□□□ 0.73
HOXC6-203ENST00000504315 COL14A1Q05707 1796 aaKnown RBP19.62■□□□□ 0.73
HOXC6-203ENST00000504315 RALGAPBQ86X10 1494 aa19.61■□□□□ 0.73
HOXC6-203ENST00000504315 PLEKHG3A1L390 1219 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms