RNA–Protein interactions for RNA: ENST00000504246.5

LINC00461-203, long intergenic non-protein coding RNA 461, humanhuman

TSL 2 BASIC

Gene LINC00461, Length 2,300 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-203ENST00000504246 NPATQ14207 1427 aa23.94■■□□□ 1.42
LINC00461-203ENST00000504246 MLH3Q9UHC1 1453 aa23.94■■□□□ 1.42
LINC00461-203ENST00000504246 TRAK1Q9UPV9 953 aa23.94■■□□□ 1.42
LINC00461-203ENST00000504246 HECW2Q9P2P5 1572 aa23.94■■□□□ 1.42
LINC00461-203ENST00000504246 RUNDC1Q96C34 613 aa23.93■■□□□ 1.42
LINC00461-203ENST00000504246 RPGRIP1LQ68CZ1 1315 aa23.93■■□□□ 1.42
LINC00461-203ENST00000504246 CANXP27824 592 aaKnown RBP23.92■■□□□ 1.42
LINC00461-203ENST00000504246 IQSEC2Q5JU85 1478 aa23.91■■□□□ 1.42
LINC00461-203ENST00000504246 CD109Q6YHK3 1445 aa23.91■■□□□ 1.42
LINC00461-203ENST00000504246 NPM1P06748 294 aaKnown RBP eCLIP23.9■■□□□ 1.42
LINC00461-203ENST00000504246 CLUAP1Q96AJ1 413 aa23.9■■□□□ 1.42
LINC00461-203ENST00000504246 SLC12A5Q9H2X9 1139 aa23.9■■□□□ 1.42
LINC00461-203ENST00000504246 MAPK8IP3Q9UPT6 1336 aa23.88■■□□□ 1.41
LINC00461-203ENST00000504246 ABCC3O15438 1527 aa23.88■■□□□ 1.41
LINC00461-203ENST00000504246 AAMPQ13685 434 aa23.88■■□□□ 1.41
LINC00461-203ENST00000504246 PUS7Q96PZ0 661 aaKnown RBP23.88■■□□□ 1.41
LINC00461-203ENST00000504246 IGHDP01880 384 aa23.87■■□□□ 1.41
LINC00461-203ENST00000504246 CFAP53Q96M91 514 aa23.87■■□□□ 1.41
LINC00461-203ENST00000504246 PHF23Q9BUL5 403 aaPredicted RBP23.87■■□□□ 1.41
LINC00461-203ENST00000504246 WDR63Q8IWG1 891 aa23.87■■□□□ 1.41
LINC00461-203ENST00000504246 TNNT2P45379 298 aaPredicted RBP23.85■■□□□ 1.41
LINC00461-203ENST00000504246 TCP11L2Q8N4U5 519 aa23.85■■□□□ 1.41
LINC00461-203ENST00000504246 CFAP65Q6ZU64 1925 aaKnown RBP23.85■■□□□ 1.41
LINC00461-203ENST00000504246 VIRMAQ69YN4 1812 aaKnown RBP23.85■■□□□ 1.41
LINC00461-203ENST00000504246 NSD2O96028 1365 aa23.85■■□□□ 1.41
LINC00461-203ENST00000504246 CAMSAP1Q5T5Y3 1602 aa23.85■■□□□ 1.41
LINC00461-203ENST00000504246 SLC4A3P48751 1232 aa23.84■■□□□ 1.41
LINC00461-203ENST00000504246 CCDC27Q2M243 656 aa23.84■■□□□ 1.41
LINC00461-203ENST00000504246 GGT6Q6P531 493 aa23.84■■□□□ 1.41
LINC00461-203ENST00000504246 PANK1Q8TE04 598 aa23.84■■□□□ 1.41
LINC00461-203ENST00000504246 COG6Q9Y2V7 657 aa23.84■■□□□ 1.41
LINC00461-203ENST00000504246 RARSP54136 660 aaKnown RBP23.83■■□□□ 1.41
LINC00461-203ENST00000504246 NFKBIBQ15653 356 aa23.83■■□□□ 1.41
LINC00461-203ENST00000504246 NCBP3Q53F19 620 aaKnown RBP23.83■■□□□ 1.41
LINC00461-203ENST00000504246 TMEM132EQ6IEE7 984 aa23.83■■□□□ 1.41
LINC00461-203ENST00000504246 GLI2P10070 1586 aa23.83■■□□□ 1.41
LINC00461-203ENST00000504246 NEUROD2Q15784 382 aa23.83■■□□□ 1.4
LINC00461-203ENST00000504246 MTHFSP49914 203 aa23.82■■□□□ 1.4
LINC00461-203ENST00000504246 EVC2Q86UK5 1308 aa23.82■■□□□ 1.4
LINC00461-203ENST00000504246 RRP7AQ9Y3A4 280 aaKnown RBP23.82■■□□□ 1.4
LINC00461-203ENST00000504246 ANKRD36BQ8N2N9 1353 aa23.81■■□□□ 1.4
LINC00461-203ENST00000504246 FRAT1Q92837 279 aaPredicted RBP23.81■■□□□ 1.4
LINC00461-203ENST00000504246 PMFBP1Q8TBY8 1022 aa23.81■■□□□ 1.4
LINC00461-203ENST00000504246 PIK3C2BO00750 1634 aa23.8■■□□□ 1.4
LINC00461-203ENST00000504246 SIGLEC1Q9BZZ2 1709 aa23.79■■□□□ 1.4
LINC00461-203ENST00000504246 TULP4Q9NRJ4 1543 aa23.78■■□□□ 1.4
LINC00461-203ENST00000504246 ARHGEF28Q8N1W1 1705 aaKnown RBP23.78■■□□□ 1.4
LINC00461-203ENST00000504246 VGFO15240 615 aaPredicted RBP23.78■■□□□ 1.4
LINC00461-203ENST00000504246 MYH16Q9H6N6 1097 aa23.77■■□□□ 1.4
LINC00461-203ENST00000504246 NEO1Q92859 1461 aa23.77■■□□□ 1.4
LINC00461-203ENST00000504246 ZMYM3Q14202 1370 aa23.76■■□□□ 1.39
LINC00461-203ENST00000504246 NEXMIFQ5QGS0 1516 aa23.75■■□□□ 1.39
LINC00461-203ENST00000504246 GSE1Q14687 1217 aa23.75■■□□□ 1.39
LINC00461-203ENST00000504246 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
LINC00461-203ENST00000504246 DIP2CQ9Y2E4 1556 aa23.74■■□□□ 1.39
LINC00461-203ENST00000504246 ADGRB2O60241 1585 aa23.73■■□□□ 1.39
LINC00461-203ENST00000504246 USP19O94966 1318 aa23.72■■□□□ 1.39
LINC00461-203ENST00000504246 U2AF1L5P0DN76 240 aaPredicted RBP23.71■■□□□ 1.39
LINC00461-203ENST00000504246 U2AF1Q01081 240 aaKnown RBP eCLIP23.71■■□□□ 1.39
LINC00461-203ENST00000504246 ARHGAP31Q2M1Z3 1444 aa23.7■■□□□ 1.38
LINC00461-203ENST00000504246 CT47B1P0C2W7 299 aaPredicted RBP23.7■■□□□ 1.38
LINC00461-203ENST00000504246 RLBP1P12271 317 aa23.7■■□□□ 1.38
LINC00461-203ENST00000504246 PCDHB15Q9Y5E8 787 aa23.68■■□□□ 1.38
LINC00461-203ENST00000504246 ZFYVE9O95405 1425 aa23.68■■□□□ 1.38
LINC00461-203ENST00000504246 RWDD1Q9H446 243 aaPredicted RBP23.68■■□□□ 1.38
LINC00461-203ENST00000504246 ABCC11Q96J66 1382 aa23.68■■□□□ 1.38
LINC00461-203ENST00000504246 BECN1Q14457 450 aa23.67■■□□□ 1.38
LINC00461-203ENST00000504246 BCL2L13Q9BXK5 485 aa23.67■■□□□ 1.38
LINC00461-203ENST00000504246 CABP2Q9NPB3 220 aa23.67■■□□□ 1.38
LINC00461-203ENST00000504246 RAPGEF3O95398 923 aa23.66■■□□□ 1.38
LINC00461-203ENST00000504246 NUTM2DQ5VT03 806 aaPredicted RBP23.66■■□□□ 1.38
LINC00461-203ENST00000504246 TNNQ9UQP3 1299 aa23.65■■□□□ 1.38
LINC00461-203ENST00000504246 RICTORQ6R327 1708 aa23.65■■□□□ 1.38
LINC00461-203ENST00000504246 MVPQ14764 893 aaKnown RBP23.65■■□□□ 1.38
LINC00461-203ENST00000504246 UPF2Q9HAU5 1272 aaKnown RBP23.65■■□□□ 1.38
LINC00461-203ENST00000504246 A0A1W2PP64 1363 aa23.65■■□□□ 1.38
LINC00461-203ENST00000504246 NLRP1Q9C000 1473 aa23.64■■□□□ 1.38
LINC00461-203ENST00000504246 SEC24BO95487 1268 aa23.64■■□□□ 1.38
LINC00461-203ENST00000504246 ZKSCAN2Q63HK3 967 aa23.64■■□□□ 1.38
LINC00461-203ENST00000504246 PDZRN3Q9UPQ7 1066 aa23.64■■□□□ 1.37
LINC00461-203ENST00000504246 SLC52A1Q9NWF4 448 aa23.62■■□□□ 1.37
LINC00461-203ENST00000504246 ATAD2Q6PL18 1390 aa23.61■■□□□ 1.37
LINC00461-203ENST00000504246 FRAT2O75474 233 aaPredicted RBP23.61■■□□□ 1.37
LINC00461-203ENST00000504246 FTSJ3Q8IY81 847 aaKnown RBP23.61■■□□□ 1.37
LINC00461-203ENST00000504246 IL27Q8NEV9 243 aa23.61■■□□□ 1.37
LINC00461-203ENST00000504246 DZIP1LQ8IYY4 767 aaKnown RBP23.61■■□□□ 1.37
LINC00461-203ENST00000504246 SRPK2P78362 688 aaKnown RBP23.6■■□□□ 1.37
LINC00461-203ENST00000504246 MED14O60244 1454 aa23.6■■□□□ 1.37
LINC00461-203ENST00000504246 COL3A1P02461 1466 aaPredicted RBP23.6■■□□□ 1.37
LINC00461-203ENST00000504246 IDI1Q13907 227 aa23.6■■□□□ 1.37
LINC00461-203ENST00000504246 SAFB2Q14151 953 aaKnown RBP eCLIP23.59■■□□□ 1.37
LINC00461-203ENST00000504246 PLEKHF1Q96S99 279 aa23.59■■□□□ 1.37
LINC00461-203ENST00000504246 TERF2IPQ9NYB0 399 aa23.59■■□□□ 1.37
LINC00461-203ENST00000504246 U2SURPO15042 1029 aaKnown RBP23.58■■□□□ 1.37
LINC00461-203ENST00000504246 ANKRD26Q9UPS8 1709 aa23.58■■□□□ 1.37
LINC00461-203ENST00000504246 TMPOP42166 694 aaKnown RBP23.58■■□□□ 1.36
LINC00461-203ENST00000504246 PREX1Q8TCU6 1659 aa23.57■■□□□ 1.36
LINC00461-203ENST00000504246 IL16Q14005 1332 aa23.57■■□□□ 1.36
LINC00461-203ENST00000504246 SMC4Q9NTJ3 1288 aa23.57■■□□□ 1.36
LINC00461-203ENST00000504246 MYO5BQ9ULV0 1848 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms