RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 MORN1Q5T089 497 aa7.11□□□□□ -1.27
HMGB3P17-201ENST00000504195 ALDH1A1P00352 501 aa7.1□□□□□ -1.27
HMGB3P17-201ENST00000504195 FECHP22830 423 aa7.1□□□□□ -1.27
HMGB3P17-201ENST00000504195 FAM161AQ3B820 660 aa7.1□□□□□ -1.27
HMGB3P17-201ENST00000504195 CAPN5O15484 640 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P17-201ENST00000504195 GSK3AP49840 483 aa7.09□□□□□ -1.27
HMGB3P17-201ENST00000504195 PTGDRQ13258 359 aa7.09□□□□□ -1.27
HMGB3P17-201ENST00000504195 MSS51Q4VC12 460 aa7.09□□□□□ -1.27
HMGB3P17-201ENST00000504195 XP32Q5T750 250 aa7.09□□□□□ -1.27
HMGB3P17-201ENST00000504195 TRIM46Q7Z4K8 759 aa7.09□□□□□ -1.27
HMGB3P17-201ENST00000504195 RDH13Q8NBN7 331 aa7.09□□□□□ -1.27
HMGB3P17-201ENST00000504195 ATP6V1AP38606 617 aa7.08□□□□□ -1.28
HMGB3P17-201ENST00000504195 FUT2Q10981 343 aa7.08□□□□□ -1.28
HMGB3P17-201ENST00000504195 RC3H1Q5TC82 1133 aaKnown RBP7.07□□□□□ -1.28
HMGB3P17-201ENST00000504195 GPAT2Q6NUI2 795 aa7.07□□□□□ -1.28
HMGB3P17-201ENST00000504195 SLC27A5Q9Y2P5 690 aa7.07□□□□□ -1.28
HMGB3P17-201ENST00000504195 SALL2Q9Y467 1007 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P17-201ENST00000504195 WASF2Q9Y6W5 498 aa7.07□□□□□ -1.28
HMGB3P17-201ENST00000504195 IGHA1P01876 353 aa7.06□□□□□ -1.28
HMGB3P17-201ENST00000504195 VSIG8P0DPA2 414 aa7.05□□□□□ -1.28
HMGB3P17-201ENST00000504195 OATP04181 439 aa7.04□□□□□ -1.28
HMGB3P17-201ENST00000504195 WNT7BP56706 349 aa7.04□□□□□ -1.28
HMGB3P17-201ENST00000504195 BRICD5Q6PL45 260 aa7.04□□□□□ -1.28
HMGB3P17-201ENST00000504195 ZFP42Q96MM3 310 aa7.04□□□□□ -1.28
HMGB3P17-201ENST00000504195 CCDC24Q8N4L8 307 aa7.03□□□□□ -1.28
HMGB3P17-201ENST00000504195 BBXQ8WY36 941 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P17-201ENST00000504195 DNMT3AQ9Y6K1 912 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P17-201ENST00000504195 NUTM2FA1L443 756 aa7.02□□□□□ -1.29
HMGB3P17-201ENST00000504195 PXYLP1Q8TE99 480 aa7.02□□□□□ -1.29
HMGB3P17-201ENST00000504195 SCARF1Q14162 830 aa7.01□□□□□ -1.29
HMGB3P17-201ENST00000504195 GRIPAP1Q4V328 841 aa7.01□□□□□ -1.29
HMGB3P17-201ENST00000504195 RNF19BQ6ZMZ0 732 aa7.01□□□□□ -1.29
HMGB3P17-201ENST00000504195 DDX11L8A8MPP1 907 aa7□□□□□ -1.29
HMGB3P17-201ENST00000504195 MMP16P51512 607 aa7□□□□□ -1.29
HMGB3P17-201ENST00000504195 SKOR1P84550 965 aa7□□□□□ -1.29
HMGB3P17-201ENST00000504195 FOXK2Q01167 660 aa7□□□□□ -1.29
HMGB3P17-201ENST00000504195 Q3C1V9 767 aa7□□□□□ -1.29
HMGB3P17-201ENST00000504195 EHBP1Q8NDI1 1231 aa6.99□□□□□ -1.29
HMGB3P17-201ENST00000504195 ADAMTS8Q9UP79 889 aa6.99□□□□□ -1.29
HMGB3P17-201ENST00000504195 FCHSD2O94868 740 aa6.97□□□□□ -1.29
HMGB3P17-201ENST00000504195 SPRYD3Q8NCJ5 442 aa6.97□□□□□ -1.29
HMGB3P17-201ENST00000504195 MLLT3P42568 568 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P17-201ENST00000504195 MRPL14Q6P1L8 145 aaKnown RBP6.96□□□□□ -1.3
HMGB3P17-201ENST00000504195 METTL3Q86U44 580 aaKnown RBP6.96□□□□□ -1.3
HMGB3P17-201ENST00000504195 SULF1Q8IWU6 871 aa6.96□□□□□ -1.3
HMGB3P17-201ENST00000504195 PURBQ96QR8 312 aaKnown RBP6.96□□□□□ -1.3
HMGB3P17-201ENST00000504195 KRTAP4-8Q9BYQ9 185 aa6.96□□□□□ -1.3
HMGB3P17-201ENST00000504195 DAXXQ9UER7 740 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P17-201ENST00000504195 SOBPA7XYQ1 873 aa6.95□□□□□ -1.3
HMGB3P17-201ENST00000504195 DXOO77932 396 aaKnown RBP6.95□□□□□ -1.3
HMGB3P17-201ENST00000504195 IRS1P35568 1242 aa6.95□□□□□ -1.3
HMGB3P17-201ENST00000504195 GCGRP47871 477 aa6.95□□□□□ -1.3
HMGB3P17-201ENST00000504195 SVOPQ8N4V2 548 aa6.94□□□□□ -1.3
HMGB3P17-201ENST00000504195 MAN1A2O60476 641 aa6.93□□□□□ -1.3
HMGB3P17-201ENST00000504195 KANK3Q6NY19 840 aa6.93□□□□□ -1.3
HMGB3P17-201ENST00000504195 USB1Q9BQ65 265 aaKnown RBP6.93□□□□□ -1.3
HMGB3P17-201ENST00000504195 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P17-201ENST00000504195 SIAH2O43255 324 aa6.92□□□□□ -1.3
HMGB3P17-201ENST00000504195 PPFIA3O75145 1194 aa6.91□□□□□ -1.3
HMGB3P17-201ENST00000504195 CNTNAP3BQ96NU0 1288 aa6.91□□□□□ -1.3
HMGB3P17-201ENST00000504195 CNTNAP3Q9BZ76 1288 aa6.91□□□□□ -1.3
HMGB3P17-201ENST00000504195 ADAM23O75077 832 aa6.9□□□□□ -1.3
HMGB3P17-201ENST00000504195 MARSP56192 900 aaKnown RBP6.9□□□□□ -1.3
HMGB3P17-201ENST00000504195 PSMG3-AS1Q96PY0 264 aa6.9□□□□□ -1.3
HMGB3P17-201ENST00000504195 PLEKHG3A1L390 1219 aa6.88□□□□□ -1.31
HMGB3P17-201ENST00000504195 NNTQ13423 1086 aa6.88□□□□□ -1.31
HMGB3P17-201ENST00000504195 SCARF2Q96GP6 870 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P17-201ENST00000504195 MSTNO14793 375 aa6.87□□□□□ -1.31
HMGB3P17-201ENST00000504195 ADH1CP00326 375 aa6.87□□□□□ -1.31
HMGB3P17-201ENST00000504195 ARHGEF1Q92888 912 aaKnown RBP6.87□□□□□ -1.31
HMGB3P17-201ENST00000504195 WDR4P57081 412 aaKnown RBP6.86□□□□□ -1.31
HMGB3P17-201ENST00000504195 HIC1Q14526 733 aa6.86□□□□□ -1.31
HMGB3P17-201ENST00000504195 ZNF385CQ66K41 422 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P17-201ENST00000504195 TLL2Q9Y6L7 1015 aa6.86□□□□□ -1.31
HMGB3P17-201ENST00000504195 KRT76Q01546 638 aa6.85□□□□□ -1.31
HMGB3P17-201ENST00000504195 TIMP2P16035 220 aa6.84□□□□□ -1.31
HMGB3P17-201ENST00000504195 JUNDP17535 347 aa6.84□□□□□ -1.31
HMGB3P17-201ENST00000504195 C6orf118Q5T5N4 469 aa6.84□□□□□ -1.31
HMGB3P17-201ENST00000504195 GALNT6Q8NCL4 622 aa6.84□□□□□ -1.31
HMGB3P17-201ENST00000504195 NUDT12Q9BQG2 462 aa6.84□□□□□ -1.31
HMGB3P17-201ENST00000504195 UPP2O95045 317 aa6.83□□□□□ -1.32
HMGB3P17-201ENST00000504195 NLRP7Q8WX94 980 aa6.83□□□□□ -1.32
HMGB3P17-201ENST00000504195 COL25A1Q9BXS0 654 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P17-201ENST00000504195 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P17-201ENST00000504195 SH3BP2P78314 561 aa6.82□□□□□ -1.32
HMGB3P17-201ENST00000504195 KRTAP9-2Q9BYQ4 174 aa6.82□□□□□ -1.32
HMGB3P17-201ENST00000504195 BMP2P12643 396 aa6.81□□□□□ -1.32
HMGB3P17-201ENST00000504195 GPR161Q8N6U8 529 aaKnown RBP6.8□□□□□ -1.32
HMGB3P17-201ENST00000504195 KRTAP9-6A0A140TA67 174 aa6.79□□□□□ -1.32
HMGB3P17-201ENST00000504195 Q8N3U1 123 aa6.79□□□□□ -1.32
HMGB3P17-201ENST00000504195 CFAP44Q96MT7 982 aa6.79□□□□□ -1.32
HMGB3P17-201ENST00000504195 SPOCK3Q9BQ16 436 aa6.79□□□□□ -1.32
HMGB3P17-201ENST00000504195 K7ELQ4 463 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P17-201ENST00000504195 KDM4AO75164 1064 aa6.78□□□□□ -1.32
HMGB3P17-201ENST00000504195 ARHGEF15O94989 841 aa6.78□□□□□ -1.32
HMGB3P17-201ENST00000504195 VARSP26640 1264 aaKnown RBP6.78□□□□□ -1.32
HMGB3P17-201ENST00000504195 MAP3K10Q02779 954 aa6.78□□□□□ -1.32
HMGB3P17-201ENST00000504195 PLA2G4EQ3MJ16 856 aa6.78□□□□□ -1.32
HMGB3P17-201ENST00000504195 LINC01559Q495D7 138 aa6.78□□□□□ -1.32
HMGB3P17-201ENST00000504195 PTCRAQ6ISU1 281 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms