RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 RARSP54136 660 aaKnown RBP16.48■□□□□ 0.23
SPCS3-201ENST00000503362 UHRF1BP1Q6BDS2 1440 aa16.47■□□□□ 0.23
SPCS3-201ENST00000503362 GNAI1P63096 354 aa16.47■□□□□ 0.23
SPCS3-201ENST00000503362 NINLQ9Y2I6 1382 aa16.47■□□□□ 0.23
SPCS3-201ENST00000503362 RNF123Q5XPI4 1314 aa16.47■□□□□ 0.23
SPCS3-201ENST00000503362 NGDNQ8NEJ9 315 aaKnown RBP16.46■□□□□ 0.23
SPCS3-201ENST00000503362 API5Q9BZZ5 524 aaKnown RBP16.46■□□□□ 0.23
SPCS3-201ENST00000503362 CYB5RLQ6IPT4 315 aa16.46■□□□□ 0.23
SPCS3-201ENST00000503362 ARHGEF12Q9NZN5 1544 aa16.46■□□□□ 0.23
SPCS3-201ENST00000503362 AMPHP49418 695 aa16.46■□□□□ 0.23
SPCS3-201ENST00000503362 FOXD4L5Q5VV16 416 aaPredicted RBP16.46■□□□□ 0.23
SPCS3-201ENST00000503362 FOXD4L4Q8WXT5 416 aaPredicted RBP16.46■□□□□ 0.23
SPCS3-201ENST00000503362 SYCP2Q9BX26 1530 aa16.45■□□□□ 0.22
SPCS3-201ENST00000503362 DDX49Q9Y6V7 483 aaKnown RBP16.45■□□□□ 0.22
SPCS3-201ENST00000503362 RAPGEF3O95398 923 aa16.45■□□□□ 0.22
SPCS3-201ENST00000503362 ATF7IPQ6VMQ6 1270 aa16.45■□□□□ 0.22
SPCS3-201ENST00000503362 ST18O60284 1047 aa16.45■□□□□ 0.22
SPCS3-201ENST00000503362 LTV1Q96GA3 475 aaPredicted RBP16.45■□□□□ 0.22
SPCS3-201ENST00000503362 C1orf115Q9H7X2 142 aa16.45■□□□□ 0.22
SPCS3-201ENST00000503362 IGHDP01880 384 aa16.44■□□□□ 0.22
SPCS3-201ENST00000503362 CABP1Q9NZU7 370 aa16.44■□□□□ 0.22
SPCS3-201ENST00000503362 ADGRL2O95490 1459 aa16.44■□□□□ 0.22
SPCS3-201ENST00000503362 PLEKHH1Q9ULM0 1364 aa16.43■□□□□ 0.22
SPCS3-201ENST00000503362 KIAA1211Q6ZU35 1233 aa16.43■□□□□ 0.22
SPCS3-201ENST00000503362 TMPOP42166 694 aaKnown RBP16.42■□□□□ 0.22
SPCS3-201ENST00000503362 SHANK2Q9UPX8 1470 aa16.42■□□□□ 0.22
SPCS3-201ENST00000503362 PBRM1Q86U86 1689 aa16.42■□□□□ 0.22
SPCS3-201ENST00000503362 CDK19Q9BWU1 502 aa16.4■□□□□ 0.22
SPCS3-201ENST00000503362 RILPL2Q969X0 211 aa16.4■□□□□ 0.22
SPCS3-201ENST00000503362 CT47B1P0C2W7 299 aaPredicted RBP16.4■□□□□ 0.22
SPCS3-201ENST00000503362 RPGRIP1LQ68CZ1 1315 aa16.39■□□□□ 0.21
SPCS3-201ENST00000503362 TRAK2O60296 914 aa16.39■□□□□ 0.21
SPCS3-201ENST00000503362 FGD1P98174 961 aa16.39■□□□□ 0.21
SPCS3-201ENST00000503362 SKOR2Q2VWA4 1001 aaPredicted RBP16.39■□□□□ 0.21
SPCS3-201ENST00000503362 SSH1Q8WYL5 1049 aa16.39■□□□□ 0.21
SPCS3-201ENST00000503362 NECTIN2Q92692 538 aa16.38■□□□□ 0.21
SPCS3-201ENST00000503362 NUP160Q12769 1436 aa16.38■□□□□ 0.21
SPCS3-201ENST00000503362 TMEM57Q8N5G2 664 aa16.38■□□□□ 0.21
SPCS3-201ENST00000503362 TWISTNBQ3B726 338 aaPredicted RBP16.38■□□□□ 0.21
SPCS3-201ENST00000503362 A2MP01023 1474 aa16.37■□□□□ 0.21
SPCS3-201ENST00000503362 RSPH6AQ9H0K4 717 aa16.37■□□□□ 0.21
SPCS3-201ENST00000503362 SLC52A1Q9NWF4 448 aa16.37■□□□□ 0.21
SPCS3-201ENST00000503362 COL17A1Q9UMD9 1497 aaPredicted RBP16.37■□□□□ 0.21
SPCS3-201ENST00000503362 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
SPCS3-201ENST00000503362 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
SPCS3-201ENST00000503362 NOS1P29475 1434 aa16.37■□□□□ 0.21
SPCS3-201ENST00000503362 ADGRL1O94910 1474 aa16.37■□□□□ 0.21
SPCS3-201ENST00000503362 FOXD4L6Q3SYB3 417 aaPredicted RBP16.37■□□□□ 0.21
SPCS3-201ENST00000503362 FOXD4L3Q6VB84 417 aaPredicted RBP16.37■□□□□ 0.21
SPCS3-201ENST00000503362 EIF4G3O43432 1585 aaKnown RBP16.37■□□□□ 0.21
SPCS3-201ENST00000503362 EID1Q9Y6B2 187 aa16.36■□□□□ 0.21
SPCS3-201ENST00000503362 ASXL1Q8IXJ9 1541 aa16.36■□□□□ 0.21
SPCS3-201ENST00000503362 GOLGA6L4A6NEF3 574 aa16.36■□□□□ 0.21
SPCS3-201ENST00000503362 PLCH2O75038 1416 aa16.36■□□□□ 0.21
SPCS3-201ENST00000503362 DUOX2Q9NRD8 1548 aa16.36■□□□□ 0.21
SPCS3-201ENST00000503362 C8orf34Q49A92 452 aa16.36■□□□□ 0.21
SPCS3-201ENST00000503362 THUMPD2Q9BTF0 503 aaKnown RBP16.36■□□□□ 0.21
SPCS3-201ENST00000503362 TRAPPC8Q9Y2L5 1435 aa16.36■□□□□ 0.21
SPCS3-201ENST00000503362 REC8O95072 547 aa16.35■□□□□ 0.21
SPCS3-201ENST00000503362 CDC45O75419 566 aa16.35■□□□□ 0.21
SPCS3-201ENST00000503362 FAM69CQ0P6D2 419 aa16.35■□□□□ 0.21
SPCS3-201ENST00000503362 ANO8Q9HCE9 1232 aaPredicted RBP16.35■□□□□ 0.21
SPCS3-201ENST00000503362 CARD14Q9BXL6 1004 aa16.34■□□□□ 0.21
SPCS3-201ENST00000503362 NAP1L2Q9ULW6 460 aaPredicted RBP16.34■□□□□ 0.21
SPCS3-201ENST00000503362 CHD1LQ86WJ1 897 aa16.33■□□□□ 0.21
SPCS3-201ENST00000503362 C14orf93Q9H972 538 aaKnown RBP16.33■□□□□ 0.21
SPCS3-201ENST00000503362 PCDHB15Q9Y5E8 787 aa16.33■□□□□ 0.21
SPCS3-201ENST00000503362 INTS3Q68E01 1043 aaKnown RBP16.33■□□□□ 0.2
SPCS3-201ENST00000503362 GCC1Q96CN9 775 aa16.33■□□□□ 0.2
SPCS3-201ENST00000503362 TAOK2Q9UL54 1235 aa16.33■□□□□ 0.2
SPCS3-201ENST00000503362 FKBP5Q13451 457 aaPredicted RBP16.33■□□□□ 0.2
SPCS3-201ENST00000503362 TXNDC2Q86VQ3 553 aa16.33■□□□□ 0.2
SPCS3-201ENST00000503362 GPRASP1Q5JY77 1395 aa16.32■□□□□ 0.2
SPCS3-201ENST00000503362 A0A0G2JS52 829 aa16.32■□□□□ 0.2
SPCS3-201ENST00000503362 SYAP1Q96A49 352 aaPredicted RBP16.32■□□□□ 0.2
SPCS3-201ENST00000503362 FANCAO15360 1455 aa16.32■□□□□ 0.2
SPCS3-201ENST00000503362 TRIM27P14373 513 aa16.32■□□□□ 0.2
SPCS3-201ENST00000503362 TSPYL4Q9UJ04 414 aa16.32■□□□□ 0.2
SPCS3-201ENST00000503362 ATAD2Q6PL18 1390 aa16.32■□□□□ 0.2
SPCS3-201ENST00000503362 DENND4BO75064 1496 aaPredicted RBP16.32■□□□□ 0.2
SPCS3-201ENST00000503362 FCHSD2O94868 740 aa16.32■□□□□ 0.2
SPCS3-201ENST00000503362 MCM4P33991 863 aa16.31■□□□□ 0.2
SPCS3-201ENST00000503362 TNNQ9UQP3 1299 aa16.31■□□□□ 0.2
SPCS3-201ENST00000503362 TBC1D2Q9BYX2 928 aa16.31■□□□□ 0.2
SPCS3-201ENST00000503362 MRE11P49959 708 aa16.31■□□□□ 0.2
SPCS3-201ENST00000503362 IDI1Q13907 227 aa16.31■□□□□ 0.2
SPCS3-201ENST00000503362 ZRSR1Q15695 479 aaKnown RBP16.31■□□□□ 0.2
SPCS3-201ENST00000503362 MCTP1Q6DN14 999 aa16.3■□□□□ 0.2
SPCS3-201ENST00000503362 ANO2Q9NQ90 1003 aa16.3■□□□□ 0.2
SPCS3-201ENST00000503362 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
SPCS3-201ENST00000503362 EIF2S2P20042 333 aaKnown RBP16.29■□□□□ 0.2
SPCS3-201ENST00000503362 RRS1Q15050 365 aaKnown RBP16.29■□□□□ 0.2
SPCS3-201ENST00000503362 SULT6B1Q6IMI4 303 aa16.29■□□□□ 0.2
SPCS3-201ENST00000503362 KDM5BQ9UGL1 1544 aa16.29■□□□□ 0.2
SPCS3-201ENST00000503362 NUCB2P80303 420 aa16.28■□□□□ 0.2
SPCS3-201ENST00000503362 WAPLQ7Z5K2 1190 aa16.28■□□□□ 0.2
SPCS3-201ENST00000503362 PIK3C2GO75747 1445 aa16.28■□□□□ 0.2
SPCS3-201ENST00000503362 RLBP1P12271 317 aa16.28■□□□□ 0.2
SPCS3-201ENST00000503362 EIF2AK4Q9P2K8 1649 aaKnown RBP16.28■□□□□ 0.2
SPCS3-201ENST00000503362 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms