RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 NSD3Q9BZ95 1437 aa31.48■■■□□ 2.63
DDX41-202ENST00000503078 RUNDC1Q96C34 613 aa31.48■■■□□ 2.63
DDX41-202ENST00000503078 AAMPQ13685 434 aa31.48■■■□□ 2.63
DDX41-202ENST00000503078 MORC1Q86VD1 984 aa31.48■■■□□ 2.63
DDX41-202ENST00000503078 SETBP1Q9Y6X0 1596 aa31.46■■■□□ 2.63
DDX41-202ENST00000503078 ZNF518AQ6AHZ1 1483 aa31.46■■■□□ 2.63
DDX41-202ENST00000503078 RARSP54136 660 aaKnown RBP31.46■■■□□ 2.63
DDX41-202ENST00000503078 ANO8Q9HCE9 1232 aaPredicted RBP31.46■■■□□ 2.63
DDX41-202ENST00000503078 IQSEC2Q5JU85 1478 aa31.45■■■□□ 2.63
DDX41-202ENST00000503078 SEC24BO95487 1268 aa31.45■■■□□ 2.62
DDX41-202ENST00000503078 CD109Q6YHK3 1445 aa31.45■■■□□ 2.62
DDX41-202ENST00000503078 PMFBP1Q8TBY8 1022 aa31.44■■■□□ 2.62
DDX41-202ENST00000503078 PHF23Q9BUL5 403 aaPredicted RBP31.43■■■□□ 2.62
DDX41-202ENST00000503078 NEUROD2Q15784 382 aa31.43■■■□□ 2.62
DDX41-202ENST00000503078 CFAP74Q9C0B2 1584 aa31.42■■■□□ 2.62
DDX41-202ENST00000503078 BECN1Q14457 450 aa31.42■■■□□ 2.62
DDX41-202ENST00000503078 WDR63Q8IWG1 891 aa31.42■■■□□ 2.62
DDX41-202ENST00000503078 TCP11L2Q8N4U5 519 aa31.42■■■□□ 2.62
DDX41-202ENST00000503078 PPRC1Q5VV67 1664 aaKnown RBP31.41■■■□□ 2.62
DDX41-202ENST00000503078 RRP7AQ9Y3A4 280 aaKnown RBP31.41■■■□□ 2.62
DDX41-202ENST00000503078 NOS1P29475 1434 aa31.41■■■□□ 2.62
DDX41-202ENST00000503078 NLRP1Q9C000 1473 aa31.41■■■□□ 2.62
DDX41-202ENST00000503078 ZC3H13Q5T200 1668 aaKnown RBP31.4■■■□□ 2.62
DDX41-202ENST00000503078 ADGRB3O60242 1522 aa31.39■■■□□ 2.62
DDX41-202ENST00000503078 ZMYM3Q14202 1370 aa31.39■■■□□ 2.61
DDX41-202ENST00000503078 TNNT2P45379 298 aaPredicted RBP31.38■■■□□ 2.61
DDX41-202ENST00000503078 SLC12A5Q9H2X9 1139 aa31.37■■■□□ 2.61
DDX41-202ENST00000503078 QRICH2Q9H0J4 1663 aa31.37■■■□□ 2.61
DDX41-202ENST00000503078 LMTK2Q8IWU2 1503 aa31.37■■■□□ 2.61
DDX41-202ENST00000503078 POGZQ7Z3K3 1410 aa31.37■■■□□ 2.61
DDX41-202ENST00000503078 USP32Q8NFA0 1604 aa31.36■■■□□ 2.61
DDX41-202ENST00000503078 PCDHB15Q9Y5E8 787 aa31.36■■■□□ 2.61
DDX41-202ENST00000503078 CCDC27Q2M243 656 aa31.36■■■□□ 2.61
DDX41-202ENST00000503078 TRAK1Q9UPV9 953 aa31.36■■■□□ 2.61
DDX41-202ENST00000503078 RLBP1P12271 317 aa31.35■■■□□ 2.61
DDX41-202ENST00000503078 C14orf93Q9H972 538 aaKnown RBP31.32■■■□□ 2.6
DDX41-202ENST00000503078 MLH3Q9UHC1 1453 aa31.31■■■□□ 2.6
DDX41-202ENST00000503078 MTHFSP49914 203 aa31.31■■■□□ 2.6
DDX41-202ENST00000503078 CFAP53Q96M91 514 aa31.31■■■□□ 2.6
DDX41-202ENST00000503078 TNNQ9UQP3 1299 aa31.31■■■□□ 2.6
DDX41-202ENST00000503078 UPF2Q9HAU5 1272 aaKnown RBP31.31■■■□□ 2.6
DDX41-202ENST00000503078 PDZRN3Q9UPQ7 1066 aa31.3■■■□□ 2.6
DDX41-202ENST00000503078 ADGRB1O14514 1584 aa31.3■■■□□ 2.6
DDX41-202ENST00000503078 CHGAP10645 457 aaKnown RBP31.3■■■□□ 2.6
DDX41-202ENST00000503078 PPLO60437 1756 aa31.3■■■□□ 2.6
DDX41-202ENST00000503078 NCBP3Q53F19 620 aaKnown RBP31.29■■■□□ 2.6
DDX41-202ENST00000503078 BCL2L13Q9BXK5 485 aa31.29■■■□□ 2.6
DDX41-202ENST00000503078 RWDD1Q9H446 243 aaPredicted RBP31.29■■■□□ 2.6
DDX41-202ENST00000503078 MYH16Q9H6N6 1097 aa31.28■■■□□ 2.6
DDX41-202ENST00000503078 TBC1D32Q96NH3 1257 aa31.27■■■□□ 2.6
DDX41-202ENST00000503078 HECW2Q9P2P5 1572 aa31.26■■■□□ 2.6
DDX41-202ENST00000503078 FRMPD1Q5SYB0 1578 aa31.25■■■□□ 2.59
DDX41-202ENST00000503078 SLKQ9H2G2 1235 aaPredicted RBP31.25■■■□□ 2.59
DDX41-202ENST00000503078 NEO1Q92859 1461 aa31.24■■■□□ 2.59
DDX41-202ENST00000503078 ANTXR1Q9H6X2 564 aa31.23■■■□□ 2.59
DDX41-202ENST00000503078 MVPQ14764 893 aaKnown RBP31.22■■■□□ 2.59
DDX41-202ENST00000503078 TMEM132EQ6IEE7 984 aa31.22■■■□□ 2.59
DDX41-202ENST00000503078 NSD2O96028 1365 aa31.2■■■□□ 2.59
DDX41-202ENST00000503078 POGKQ9P215 609 aa31.2■■■□□ 2.59
DDX41-202ENST00000503078 NPATQ14207 1427 aa31.2■■■□□ 2.58
DDX41-202ENST00000503078 PUS7Q96PZ0 661 aaKnown RBP31.2■■■□□ 2.58
DDX41-202ENST00000503078 ADGRB2O60241 1585 aa31.19■■■□□ 2.58
DDX41-202ENST00000503078 RPGRIP1LQ68CZ1 1315 aa31.19■■■□□ 2.58
DDX41-202ENST00000503078 ZKSCAN2Q63HK3 967 aa31.18■■■□□ 2.58
DDX41-202ENST00000503078 U2AF1L5P0DN76 240 aaPredicted RBP31.17■■■□□ 2.58
DDX41-202ENST00000503078 U2AF1Q01081 240 aaKnown RBP eCLIP31.17■■■□□ 2.583e-7■■■■□ 19.9
DDX41-202ENST00000503078 TBC1D2Q9BYX2 928 aa31.17■■■□□ 2.58
DDX41-202ENST00000503078 ANKRD36BQ8N2N9 1353 aa31.17■■■□□ 2.58
DDX41-202ENST00000503078 CT47B1P0C2W7 299 aaPredicted RBP31.16■■■□□ 2.58
DDX41-202ENST00000503078 EVC2Q86UK5 1308 aa31.15■■■□□ 2.58
DDX41-202ENST00000503078 DZIP1LQ8IYY4 767 aaKnown RBP31.15■■■□□ 2.58
DDX41-202ENST00000503078 FTSJ3Q8IY81 847 aaKnown RBP31.14■■■□□ 2.58
DDX41-202ENST00000503078 CFAP65Q6ZU64 1925 aaKnown RBP31.14■■■□□ 2.58
DDX41-202ENST00000503078 GLI2P10070 1586 aa31.13■■■□□ 2.57
DDX41-202ENST00000503078 TULP4Q9NRJ4 1543 aa31.12■■■□□ 2.57
DDX41-202ENST00000503078 RAPGEF3O95398 923 aa31.12■■■□□ 2.57
DDX41-202ENST00000503078 FAM43AQ8N2R8 423 aa31.12■■■□□ 2.57
DDX41-202ENST00000503078 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.11■■■□□ 2.57
DDX41-202ENST00000503078 ARHGEF28Q8N1W1 1705 aaKnown RBP31.1■■■□□ 2.57
DDX41-202ENST00000503078 GGT6Q6P531 493 aa31.08■■■□□ 2.57
DDX41-202ENST00000503078 TSR2Q969E8 191 aaKnown RBP31.07■■■□□ 2.56
DDX41-202ENST00000503078 SMC4Q9NTJ3 1288 aa31.06■■■□□ 2.56
DDX41-202ENST00000503078 HDAC1Q13547 482 aaPredicted RBP31.06■■■□□ 2.56
DDX41-202ENST00000503078 L1TD1Q5T7N2 865 aaKnown RBP31.05■■■□□ 2.56
DDX41-202ENST00000503078 CYB5RLQ6IPT4 315 aa31.05■■■□□ 2.56
DDX41-202ENST00000503078 RICTORQ6R327 1708 aa31.05■■■□□ 2.56
DDX41-202ENST00000503078 DIP2CQ9Y2E4 1556 aa31.05■■■□□ 2.56
DDX41-202ENST00000503078 ABCC3O15438 1527 aa31.05■■■□□ 2.56
DDX41-202ENST00000503078 EXOSC9Q06265 439 aaKnown RBP31.04■■■□□ 2.56
DDX41-202ENST00000503078 PLEKHF1Q96S99 279 aa31.03■■■□□ 2.56
DDX41-202ENST00000503078 TRIM27P14373 513 aa31.03■■■□□ 2.56
DDX41-202ENST00000503078 DDX19BQ9UMR2 479 aa31.03■■■□□ 2.56
DDX41-202ENST00000503078 C22orf23Q9BZE7 217 aa31.02■■■□□ 2.56
DDX41-202ENST00000503078 CABP2Q9NPB3 220 aa31.02■■■□□ 2.56
DDX41-202ENST00000503078 TMPOP42166 694 aaKnown RBP31.01■■■□□ 2.56
DDX41-202ENST00000503078 ABCC11Q96J66 1382 aa31.01■■■□□ 2.55
DDX41-202ENST00000503078 VGFO15240 615 aaPredicted RBP31■■■□□ 2.55
DDX41-202ENST00000503078 SSH1Q8WYL5 1049 aa31■■■□□ 2.55
DDX41-202ENST00000503078 TRIM35Q9UPQ4 493 aa31■■■□□ 2.55
DDX41-202ENST00000503078 CAMSAP1Q5T5Y3 1602 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms