RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 TRPM1Q7Z4N2 1603 aa15.43■□□□□ 0.06
UBE2D3-212ENST00000502563 NEUROD1Q13562 356 aa15.42■□□□□ 0.06
UBE2D3-212ENST00000502563 TMEM132EQ6IEE7 984 aa15.42■□□□□ 0.06
UBE2D3-212ENST00000502563 ADGRB2O60241 1585 aa15.41■□□□□ 0.06
UBE2D3-212ENST00000502563 ILDR1Q86SU0 546 aaPredicted RBP15.41■□□□□ 0.06
UBE2D3-212ENST00000502563 ATF3P18847 181 aa15.39■□□□□ 0.05
UBE2D3-212ENST00000502563 MST1RQ04912 1400 aa15.39■□□□□ 0.05
UBE2D3-212ENST00000502563 ARHGEF28Q8N1W1 1705 aaKnown RBP15.39■□□□□ 0.05
UBE2D3-212ENST00000502563 RALGAPBQ86X10 1494 aa15.39■□□□□ 0.05
UBE2D3-212ENST00000502563 SLAIN2Q9P270 581 aa15.38■□□□□ 0.05
UBE2D3-212ENST00000502563 C14orf37Q86TY3 774 aa15.37■□□□□ 0.05
UBE2D3-212ENST00000502563 RBM33Q96EV2 1170 aaKnown RBP15.36■□□□□ 0.05
UBE2D3-212ENST00000502563 PLEKHH1Q9ULM0 1364 aa15.36■□□□□ 0.05
UBE2D3-212ENST00000502563 STK26Q9P289 416 aa15.35■□□□□ 0.05
UBE2D3-212ENST00000502563 ROCK2O75116 1388 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-212ENST00000502563 ROBO1Q9Y6N7 1651 aa15.35■□□□□ 0.05
UBE2D3-212ENST00000502563 C1orf167Q5SNV9 1468 aa15.34■□□□□ 0.05
UBE2D3-212ENST00000502563 NBPF1Q3BBV0 1214 aa15.34■□□□□ 0.05
UBE2D3-212ENST00000502563 WAPLQ7Z5K2 1190 aa15.34■□□□□ 0.05
UBE2D3-212ENST00000502563 CCER1Q8TC90 406 aaPredicted RBP15.34■□□□□ 0.05
UBE2D3-212ENST00000502563 PRAM1Q96QH2 718 aa15.34■□□□□ 0.05
UBE2D3-212ENST00000502563 AHDC1Q5TGY3 1603 aaPredicted RBP15.34■□□□□ 0.05
UBE2D3-212ENST00000502563 EIF3AQ14152 1382 aaKnown RBP15.34■□□□□ 0.05
UBE2D3-212ENST00000502563 NBPF8Q3BBV2 869 aa15.33■□□□□ 0.04
UBE2D3-212ENST00000502563 TRAK1Q9UPV9 953 aa15.33■□□□□ 0.04
UBE2D3-212ENST00000502563 SBNO2Q9Y2G9 1366 aa15.33■□□□□ 0.04
UBE2D3-212ENST00000502563 ANKARQ7Z5J8 1434 aa15.33■□□□□ 0.04
UBE2D3-212ENST00000502563 FMN2Q9NZ56 1722 aa15.32■□□□□ 0.04
UBE2D3-212ENST00000502563 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
UBE2D3-212ENST00000502563 POGKQ9P215 609 aa15.31■□□□□ 0.04
UBE2D3-212ENST00000502563 PIP4K2BP78356 416 aa15.3■□□□□ 0.04
UBE2D3-212ENST00000502563 BRINP3Q76B58 766 aa15.3■□□□□ 0.04
UBE2D3-212ENST00000502563 NHSL1Q5SYE7 1610 aa15.29■□□□□ 0.04
UBE2D3-212ENST00000502563 TULP4Q9NRJ4 1543 aa15.28■□□□□ 0.04
UBE2D3-212ENST00000502563 CENPJQ9HC77 1338 aaPredicted RBP15.28■□□□□ 0.04
UBE2D3-212ENST00000502563 SLC24A1O60721 1099 aa15.28■□□□□ 0.04
UBE2D3-212ENST00000502563 KIF1AQ12756 1690 aa15.28■□□□□ 0.04
UBE2D3-212ENST00000502563 RNF216Q9NWF9 866 aaPredicted RBP15.27■□□□□ 0.04
UBE2D3-212ENST00000502563 COL16A1Q07092 1604 aaPredicted RBP15.26■□□□□ 0.03
UBE2D3-212ENST00000502563 WASLO00401 505 aaPredicted RBP15.26■□□□□ 0.03
UBE2D3-212ENST00000502563 HSPA1LP34931 641 aa15.25■□□□□ 0.03
UBE2D3-212ENST00000502563 CARD11Q9BXL7 1154 aa15.25■□□□□ 0.03
UBE2D3-212ENST00000502563 QRICH2Q9H0J4 1663 aa15.25■□□□□ 0.03
UBE2D3-212ENST00000502563 USP32Q8NFA0 1604 aa15.24■□□□□ 0.03
UBE2D3-212ENST00000502563 PHLPP1O60346 1717 aa15.23■□□□□ 0.03
UBE2D3-212ENST00000502563 SOS2Q07890 1332 aaPredicted RBP15.23■□□□□ 0.03
UBE2D3-212ENST00000502563 NPHP3Q7Z494 1330 aa15.23■□□□□ 0.03
UBE2D3-212ENST00000502563 ATP7BP35670 1465 aa15.23■□□□□ 0.03
UBE2D3-212ENST00000502563 PUS7Q96PZ0 661 aaKnown RBP15.23■□□□□ 0.03
UBE2D3-212ENST00000502563 ITSN1Q15811 1721 aa15.22■□□□□ 0.03
UBE2D3-212ENST00000502563 SAFB2Q14151 953 aaKnown RBP eCLIP15.21■□□□□ 0.03
UBE2D3-212ENST00000502563 TOPAZ1Q8N9V7 1692 aa15.21■□□□□ 0.03
UBE2D3-212ENST00000502563 MINK1Q8N4C8 1332 aaPredicted RBP15.2■□□□□ 0.02
UBE2D3-212ENST00000502563 ORAI2Q96SN7 254 aa15.2■□□□□ 0.02
UBE2D3-212ENST00000502563 JCADQ9P266 1359 aa15.2■□□□□ 0.02
UBE2D3-212ENST00000502563 PXDNQ92626 1479 aa15.2■□□□□ 0.02
UBE2D3-212ENST00000502563 EVC2Q86UK5 1308 aa15.19■□□□□ 0.02
UBE2D3-212ENST00000502563 SHPRHQ149N8 1683 aa15.19■□□□□ 0.02
UBE2D3-212ENST00000502563 ESCO1Q5FWF5 840 aa15.19■□□□□ 0.02
UBE2D3-212ENST00000502563 C1QBPQ07021 282 aaKnown RBP15.18■□□□□ 0.02
UBE2D3-212ENST00000502563 LRRC59Q96AG4 307 aaKnown RBP15.18■□□□□ 0.02
UBE2D3-212ENST00000502563 HIRIP3Q9BW71 556 aaPredicted RBP15.18■□□□□ 0.02
UBE2D3-212ENST00000502563 CDK19Q9BWU1 502 aa15.18■□□□□ 0.02
UBE2D3-212ENST00000502563 PHF8Q9UPP1 1060 aa15.18■□□□□ 0.02
UBE2D3-212ENST00000502563 CCDC61Q9Y6R9 512 aa15.18■□□□□ 0.02
UBE2D3-212ENST00000502563 POLR3AO14802 1390 aaPredicted RBP15.18■□□□□ 0.02
UBE2D3-212ENST00000502563 PRR36Q9H6K5 1346 aa15.17■□□□□ 0.02
UBE2D3-212ENST00000502563 BRD4O60885 1362 aaPredicted RBP15.17■□□□□ 0.02
UBE2D3-212ENST00000502563 ATAD2Q6PL18 1390 aa15.17■□□□□ 0.02
UBE2D3-212ENST00000502563 USP47Q96K76 1375 aa15.17■□□□□ 0.02
UBE2D3-212ENST00000502563 SPATA31A6Q5VVP1 1343 aa15.17■□□□□ 0.02
UBE2D3-212ENST00000502563 RGPD8O14715 1765 aaPredicted RBP15.16■□□□□ 0.02
UBE2D3-212ENST00000502563 SBNO1A3KN83 1393 aa15.16■□□□□ 0.02
UBE2D3-212ENST00000502563 PLEKHG3A1L390 1219 aa15.16■□□□□ 0.02
UBE2D3-212ENST00000502563 NUDT16Q96DE0 195 aaKnown RBP15.16■□□□□ 0.02
UBE2D3-212ENST00000502563 TESK2Q96S53 571 aa15.16■□□□□ 0.02
UBE2D3-212ENST00000502563 COL22A1Q8NFW1 1626 aaPredicted RBP15.15■□□□□ 0.02
UBE2D3-212ENST00000502563 NINLQ9Y2I6 1382 aa15.13■□□□□ 0.01
UBE2D3-212ENST00000502563 FOXO3O43524 673 aa15.13■□□□□ 0.01
UBE2D3-212ENST00000502563 PSME1Q06323 249 aa15.13■□□□□ 0.01
UBE2D3-212ENST00000502563 PNPLA6Q8IY17 1366 aa15.12■□□□□ 0.01
UBE2D3-212ENST00000502563 ST20-MTHFSA0A0A6YYL1 179 aa15.12■□□□□ 0.01
UBE2D3-212ENST00000502563 TNS3Q68CZ2 1445 aa15.11■□□□□ 0.01
UBE2D3-212ENST00000502563 NUTM2FA1L443 756 aa15.11■□□□□ 0.01
UBE2D3-212ENST00000502563 SRPK2P78362 688 aaKnown RBP15.11■□□□□ 0.01
UBE2D3-212ENST00000502563 TRPM3Q9HCF6 1732 aaPredicted RBP15.11■□□□□ 0.01
UBE2D3-212ENST00000502563 SPATA31A3Q5VYP0 1347 aa15.11■□□□□ 0.01
UBE2D3-212ENST00000502563 ARHGEF10O15013 1369 aa15.11■□□□□ 0.01
UBE2D3-212ENST00000502563 PPIP5K1Q6PFW1 1433 aa15.1■□□□□ 0.01
UBE2D3-212ENST00000502563 CDCA8Q53HL2 280 aa15.09■□□□□ 0.01
UBE2D3-212ENST00000502563 MED1Q15648 1581 aaPredicted RBP15.09■□□□□ 0.01
UBE2D3-212ENST00000502563 TMF1P82094 1093 aa15.08■□□□□ 0
UBE2D3-212ENST00000502563 KRT28Q7Z3Y7 464 aa15.08■□□□□ 0
UBE2D3-212ENST00000502563 ZNF692Q9BU19 519 aaPredicted RBP15.08■□□□□ 0
UBE2D3-212ENST00000502563 CABP2Q9NPB3 220 aa15.08■□□□□ 0
UBE2D3-212ENST00000502563 ALS2Q96Q42 1657 aa15.08■□□□□ 0
UBE2D3-212ENST00000502563 CPSF1Q10570 1443 aaKnown RBP15.08■□□□□ 0
UBE2D3-212ENST00000502563 EIF4G2P78344 907 aaKnown RBP eCLIP15.07■□□□□ 0
UBE2D3-212ENST00000502563 NGDNQ8NEJ9 315 aaKnown RBP15.07■□□□□ 0
UBE2D3-212ENST00000502563 DDX17Q92841 729 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms