RNA–Protein interactions for RNA: ENST00000499125.3

HMGN1P12-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 12, humanhuman

BASIC

Gene HMGN1P12, Length 195 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P12-201ENST00000499125 POTECB2RU33 542 aa8.61□□□□□ -1.03
HMGN1P12-201ENST00000499125 AAASQ9NRG9 546 aa8.61□□□□□ -1.03
HMGN1P12-201ENST00000499125 ST8SIA5O15466 376 aa8.6□□□□□ -1.03
HMGN1P12-201ENST00000499125 USP46P62068 366 aa8.6□□□□□ -1.03
HMGN1P12-201ENST00000499125 USB1Q9BQ65 265 aaKnown RBP8.6□□□□□ -1.03
HMGN1P12-201ENST00000499125 TOR4AQ9NXH8 423 aa8.6□□□□□ -1.03
HMGN1P12-201ENST00000499125 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
HMGN1P12-201ENST00000499125 CCDC102AQ96A19 550 aa8.59□□□□□ -1.03
HMGN1P12-201ENST00000499125 TTC24A2A3L6 582 aaPredicted RBP8.58□□□□□ -1.04
HMGN1P12-201ENST00000499125 MMP16P51512 607 aa8.58□□□□□ -1.04
HMGN1P12-201ENST00000499125 CLCN1P35523 988 aa8.57□□□□□ -1.04
HMGN1P12-201ENST00000499125 GPCPD1Q9NPB8 672 aa8.57□□□□□ -1.04
HMGN1P12-201ENST00000499125 TRIM32Q13049 653 aa8.56□□□□□ -1.04
HMGN1P12-201ENST00000499125 HLA-CQ95604 372 aa8.56□□□□□ -1.04
HMGN1P12-201ENST00000499125 WNT7AO00755 349 aa8.55□□□□□ -1.04
HMGN1P12-201ENST00000499125 AXIN1O15169 862 aa8.55□□□□□ -1.04
HMGN1P12-201ENST00000499125 HOXA2O43364 376 aa8.55□□□□□ -1.04
HMGN1P12-201ENST00000499125 DXOO77932 396 aaKnown RBP8.55□□□□□ -1.04
HMGN1P12-201ENST00000499125 AVPP01185 164 aa8.55□□□□□ -1.04
HMGN1P12-201ENST00000499125 NUTM1Q86Y26 1132 aa8.55□□□□□ -1.04
HMGN1P12-201ENST00000499125 CCDC24Q8N4L8 307 aa8.55□□□□□ -1.04
HMGN1P12-201ENST00000499125 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.54□□□□□ -1.04
HMGN1P12-201ENST00000499125 CRIPAKQ8N1N5 446 aa8.54□□□□□ -1.04
HMGN1P12-201ENST00000499125 FAM217BQ9NTX9 383 aaPredicted RBP8.54□□□□□ -1.04
HMGN1P12-201ENST00000499125 CTC1Q2NKJ3 1217 aa8.53□□□□□ -1.04
HMGN1P12-201ENST00000499125 SNIP1Q8TAD8 396 aaKnown RBP8.53□□□□□ -1.04
HMGN1P12-201ENST00000499125 GUCA2AQ02747 115 aa8.52□□□□□ -1.05
HMGN1P12-201ENST00000499125 DACH1Q9UI36 760 aa8.52□□□□□ -1.05
HMGN1P12-201ENST00000499125 SYMPKQ92797 1274 aaKnown RBP8.51□□□□□ -1.05
HMGN1P12-201ENST00000499125 MRGPRX2Q96LB1 330 aa8.51□□□□□ -1.05
HMGN1P12-201ENST00000499125 SMPD1P17405 629 aa8.49□□□□□ -1.05
HMGN1P12-201ENST00000499125 SMCPP49901 116 aaPredicted RBP8.49□□□□□ -1.05
HMGN1P12-201ENST00000499125 REPIN1Q9BWE0 567 aaKnown RBP8.49□□□□□ -1.05
HMGN1P12-201ENST00000499125 GMPR2Q9P2T1 348 aaKnown RBP8.49□□□□□ -1.05
HMGN1P12-201ENST00000499125 C11orf95C9JLR9 678 aaPredicted RBP8.48□□□□□ -1.05
HMGN1P12-201ENST00000499125 JUNDP17535 347 aa8.48□□□□□ -1.05
HMGN1P12-201ENST00000499125 RETREG3Q86VR2 466 aa8.48□□□□□ -1.05
HMGN1P12-201ENST00000499125 J3QL48 77 aa8.47□□□□□ -1.05
HMGN1P12-201ENST00000499125 FDX1P10109 184 aa8.47□□□□□ -1.05
HMGN1P12-201ENST00000499125 SSTR3P32745 418 aaPredicted RBP8.47□□□□□ -1.05
HMGN1P12-201ENST00000499125 RC3H1Q5TC82 1133 aaKnown RBP8.47□□□□□ -1.05
HMGN1P12-201ENST00000499125 C6orf229H3BNL8 230 aa8.46□□□□□ -1.06
HMGN1P12-201ENST00000499125 WNT7BP56706 349 aa8.46□□□□□ -1.06
HMGN1P12-201ENST00000499125 SKOR1P84550 965 aa8.45□□□□□ -1.06
HMGN1P12-201ENST00000499125 TTLL12Q14166 644 aaPredicted RBP8.45□□□□□ -1.06
HMGN1P12-201ENST00000499125 TREML4Q6UXN2 200 aa8.45□□□□□ -1.06
HMGN1P12-201ENST00000499125 NUDT12Q9BQG2 462 aa8.45□□□□□ -1.06
HMGN1P12-201ENST00000499125 BARGINQ6ZT62 677 aa8.44□□□□□ -1.06
HMGN1P12-201ENST00000499125 SPIRE2Q8WWL2 714 aa8.44□□□□□ -1.06
HMGN1P12-201ENST00000499125 PCDHGC3Q9UN70 934 aa8.44□□□□□ -1.06
HMGN1P12-201ENST00000499125 HPS1Q92902 700 aa8.43□□□□□ -1.06
HMGN1P12-201ENST00000499125 ZMYND10O75800 440 aa8.42□□□□□ -1.06
HMGN1P12-201ENST00000499125 ALDH1A1P00352 501 aa8.42□□□□□ -1.06
HMGN1P12-201ENST00000499125 MS4A1P11836 297 aa8.42□□□□□ -1.06
HMGN1P12-201ENST00000499125 PTCRAQ6ISU1 281 aaPredicted RBP8.42□□□□□ -1.06
HMGN1P12-201ENST00000499125 ATP13A2Q9NQ11 1180 aa8.42□□□□□ -1.06
HMGN1P12-201ENST00000499125 MOXD2PA6NHM9 499 aa8.41□□□□□ -1.06
HMGN1P12-201ENST00000499125 NDUFV2P19404 249 aa8.41□□□□□ -1.06
HMGN1P12-201ENST00000499125 CCNYL3P0C7X3 344 aa8.4□□□□□ -1.06
HMGN1P12-201ENST00000499125 EHBP1Q8NDI1 1231 aa8.4□□□□□ -1.06
HMGN1P12-201ENST00000499125 ZC3H15Q8WU90 426 aaKnown RBP8.4□□□□□ -1.06
HMGN1P12-201ENST00000499125 AMHR2Q16671 573 aa8.39□□□□□ -1.07
HMGN1P12-201ENST00000499125 GIGYF2Q6Y7W6 1299 aaKnown RBP8.39□□□□□ -1.07
HMGN1P12-201ENST00000499125 SENP2Q9HC62 589 aa8.39□□□□□ -1.07
HMGN1P12-201ENST00000499125 WFS1O76024 890 aa8.38□□□□□ -1.07
HMGN1P12-201ENST00000499125 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
HMGN1P12-201ENST00000499125 PRR7Q8TB68 274 aa8.38□□□□□ -1.07
HMGN1P12-201ENST00000499125 BEGAINQ9BUH8 593 aa8.38□□□□□ -1.07
HMGN1P12-201ENST00000499125 SPDYE5A6NIY4 337 aa8.37□□□□□ -1.07
HMGN1P12-201ENST00000499125 SNRPBP14678 240 aaKnown RBP8.37□□□□□ -1.07
HMGN1P12-201ENST00000499125 MTMR2Q13614 643 aa8.37□□□□□ -1.07
HMGN1P12-201ENST00000499125 PTPRNQ16849 979 aa8.37□□□□□ -1.07
HMGN1P12-201ENST00000499125 EVA1BQ9NVM1 165 aa8.37□□□□□ -1.07
HMGN1P12-201ENST00000499125 SIAH2O43255 324 aa8.36□□□□□ -1.07
HMGN1P12-201ENST00000499125 SH3BP2P78314 561 aa8.36□□□□□ -1.07
HMGN1P12-201ENST00000499125 TRIM47Q96LD4 638 aa8.36□□□□□ -1.07
HMGN1P12-201ENST00000499125 WASF2Q9Y6W5 498 aa8.36□□□□□ -1.07
HMGN1P12-201ENST00000499125 DIXDC1Q155Q3 683 aa8.35□□□□□ -1.07
HMGN1P12-201ENST00000499125 KIFC2Q96AC6 838 aa8.35□□□□□ -1.07
HMGN1P12-201ENST00000499125 UNC93B1Q9H1C4 597 aa8.35□□□□□ -1.07
HMGN1P12-201ENST00000499125 KCNH2Q12809 1159 aa8.34□□□□□ -1.07
HMGN1P12-201ENST00000499125 DESI1Q6ICB0 168 aa8.34□□□□□ -1.07
HMGN1P12-201ENST00000499125 BAP1Q92560 729 aa8.34□□□□□ -1.07
HMGN1P12-201ENST00000499125 NFX1Q12986 1120 aaKnown RBP8.33□□□□□ -1.08
HMGN1P12-201ENST00000499125 LINC01559Q495D7 138 aa8.33□□□□□ -1.08
HMGN1P12-201ENST00000499125 TBC1D2Q9BYX2 928 aa8.33□□□□□ -1.08
HMGN1P12-201ENST00000499125 GJA5P36382 358 aa8.32□□□□□ -1.08
HMGN1P12-201ENST00000499125 PARP9Q8IXQ6 854 aa8.32□□□□□ -1.08
HMGN1P12-201ENST00000499125 TRIM66O15016 1216 aa8.31□□□□□ -1.08
HMGN1P12-201ENST00000499125 CAPN5O15484 640 aaPredicted RBP8.31□□□□□ -1.08
HMGN1P12-201ENST00000499125 CTHP32929 405 aa8.31□□□□□ -1.08
HMGN1P12-201ENST00000499125 RSBN1LQ6PCB5 846 aaPredicted RBP8.31□□□□□ -1.08
HMGN1P12-201ENST00000499125 AK7Q96M32 723 aa8.31□□□□□ -1.08
HMGN1P12-201ENST00000499125 TERTO14746 1132 aaKnown RBP8.3□□□□□ -1.08
HMGN1P12-201ENST00000499125 ZNF511Q8NB15 262 aa8.3□□□□□ -1.08
HMGN1P12-201ENST00000499125 PCDHB15Q9Y5E8 787 aa8.3□□□□□ -1.08
HMGN1P12-201ENST00000499125 PLEKHG3A1L390 1219 aa8.29□□□□□ -1.08
HMGN1P12-201ENST00000499125 VARSP26640 1264 aaKnown RBP8.29□□□□□ -1.08
HMGN1P12-201ENST00000499125 LYPD8Q6UX82 237 aa8.29□□□□□ -1.08
HMGN1P12-201ENST00000499125 SPTLC1O15269 473 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms