RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 MED14O60244 1454 aa9.7□□□□□ -0.86
GPATCH4-209ENST00000498641 ZNF142P52746 1687 aaPredicted RBP9.7□□□□□ -0.86
GPATCH4-209ENST00000498641 ARHGEF28Q8N1W1 1705 aaKnown RBP9.7□□□□□ -0.86
GPATCH4-209ENST00000498641 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
GPATCH4-209ENST00000498641 FAM135BQ49AJ0 1406 aa9.69□□□□□ -0.86
GPATCH4-209ENST00000498641 CC2D1BQ5T0F9 858 aaKnown RBP9.69□□□□□ -0.86
GPATCH4-209ENST00000498641 KTN1Q86UP2 1357 aaKnown RBP9.69□□□□□ -0.86
GPATCH4-209ENST00000498641 TECPR2O15040 1411 aa9.68□□□□□ -0.86
GPATCH4-209ENST00000498641 NPHP4O75161 1426 aaPredicted RBP9.68□□□□□ -0.86
GPATCH4-209ENST00000498641 ROBO2Q9HCK4 1378 aa9.68□□□□□ -0.86
GPATCH4-209ENST00000498641 RALBP1Q15311 655 aa9.68□□□□□ -0.86
GPATCH4-209ENST00000498641 SLC12A5Q9H2X9 1139 aa9.68□□□□□ -0.86
GPATCH4-209ENST00000498641 SETD1AO15047 1707 aaKnown RBP9.68□□□□□ -0.86
GPATCH4-209ENST00000498641 DIP2AQ14689 1571 aa9.67□□□□□ -0.86
GPATCH4-209ENST00000498641 TULP4Q9NRJ4 1543 aa9.67□□□□□ -0.86
GPATCH4-209ENST00000498641 PTPRUQ92729 1446 aa9.67□□□□□ -0.86
GPATCH4-209ENST00000498641 ATAD2Q6PL18 1390 aa9.67□□□□□ -0.86
GPATCH4-209ENST00000498641 PIK3R4Q99570 1358 aa9.67□□□□□ -0.86
GPATCH4-209ENST00000498641 SETD1BQ9UPS6 1966 aaKnown RBP9.67□□□□□ -0.86
GPATCH4-209ENST00000498641 WASLO00401 505 aaPredicted RBP9.67□□□□□ -0.86
GPATCH4-209ENST00000498641 KCNA6P17658 529 aa9.66□□□□□ -0.86
GPATCH4-209ENST00000498641 HSPA2P54652 639 aa9.66□□□□□ -0.86
GPATCH4-209ENST00000498641 MRS2Q9HD23 443 aa9.66□□□□□ -0.86
GPATCH4-209ENST00000498641 TERF2IPQ9NYB0 399 aa9.66□□□□□ -0.86
GPATCH4-209ENST00000498641 CPS1P31327 1500 aa9.66□□□□□ -0.86
GPATCH4-209ENST00000498641 NINLQ9Y2I6 1382 aa9.65□□□□□ -0.86
GPATCH4-209ENST00000498641 HDGFL2Q7Z4V5 671 aaPredicted RBP9.65□□□□□ -0.86
GPATCH4-209ENST00000498641 CARD14Q9BXL6 1004 aa9.65□□□□□ -0.86
GPATCH4-209ENST00000498641 CABP1Q9NZU7 370 aa9.65□□□□□ -0.86
GPATCH4-209ENST00000498641 MYBBP1AQ9BQG0 1328 aaKnown RBP9.64□□□□□ -0.87
GPATCH4-209ENST00000498641 NUDT16Q96DE0 195 aaKnown RBP9.64□□□□□ -0.87
GPATCH4-209ENST00000498641 PTCH1Q13635 1447 aa9.64□□□□□ -0.87
GPATCH4-209ENST00000498641 KNDC1Q76NI1 1749 aa9.63□□□□□ -0.87
GPATCH4-209ENST00000498641 CENPBP07199 599 aaPredicted RBP9.63□□□□□ -0.87
GPATCH4-209ENST00000498641 CCDC184Q52MB2 194 aa9.63□□□□□ -0.87
GPATCH4-209ENST00000498641 AMER1Q5JTC6 1135 aaPredicted RBP9.63□□□□□ -0.87
GPATCH4-209ENST00000498641 ANKRD36BQ8N2N9 1353 aa9.63□□□□□ -0.87
GPATCH4-209ENST00000498641 PARD3Q8TEW0 1356 aa9.63□□□□□ -0.87
GPATCH4-209ENST00000498641 CGNL1Q0VF96 1302 aa9.62□□□□□ -0.87
GPATCH4-209ENST00000498641 C14orf37Q86TY3 774 aa9.62□□□□□ -0.87
GPATCH4-209ENST00000498641 CCDC61Q9Y6R9 512 aa9.62□□□□□ -0.87
GPATCH4-209ENST00000498641 NSD3Q9BZ95 1437 aa9.62□□□□□ -0.87
GPATCH4-209ENST00000498641 MYOM1P52179 1685 aa9.61□□□□□ -0.87
GPATCH4-209ENST00000498641 NUTM2FA1L443 756 aa9.61□□□□□ -0.87
GPATCH4-209ENST00000498641 MORC1Q86VD1 984 aa9.61□□□□□ -0.87
GPATCH4-209ENST00000498641 NLRP13Q86W25 1043 aa9.61□□□□□ -0.87
GPATCH4-209ENST00000498641 FAM9BQ8IZU0 186 aa9.61□□□□□ -0.87
GPATCH4-209ENST00000498641 NPC1L1Q9UHC9 1359 aa9.61□□□□□ -0.87
GPATCH4-209ENST00000498641 PPIP5K1Q6PFW1 1433 aa9.6□□□□□ -0.87
GPATCH4-209ENST00000498641 PROSER2Q86WR7 435 aaPredicted RBP9.6□□□□□ -0.87
GPATCH4-209ENST00000498641 RBM33Q96EV2 1170 aaKnown RBP9.6□□□□□ -0.87
GPATCH4-209ENST00000498641 A0A1W2PP64 1363 aa9.6□□□□□ -0.87
GPATCH4-209ENST00000498641 BRD4O60885 1362 aaPredicted RBP9.6□□□□□ -0.87
GPATCH4-209ENST00000498641 PPP2R1AP30153 589 aa9.59□□□□□ -0.87
GPATCH4-209ENST00000498641 LMTK3Q96Q04 1460 aa9.59□□□□□ -0.87
GPATCH4-209ENST00000498641 PRR36Q9H6K5 1346 aa9.58□□□□□ -0.88
GPATCH4-209ENST00000498641 ZNF692Q9BU19 519 aaPredicted RBP9.58□□□□□ -0.88
GPATCH4-209ENST00000498641 XRN1Q8IZH2 1706 aaKnown RBP9.58□□□□□ -0.88
GPATCH4-209ENST00000498641 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.57□□□□□ -0.88
GPATCH4-209ENST00000498641 TNNT2P45379 298 aaPredicted RBP9.57□□□□□ -0.88
GPATCH4-209ENST00000498641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.57□□□□□ -0.88
GPATCH4-209ENST00000498641 NSD2O96028 1365 aa9.57□□□□□ -0.88
GPATCH4-209ENST00000498641 ATP7BP35670 1465 aa9.57□□□□□ -0.88
GPATCH4-209ENST00000498641 ADGRB2O60241 1585 aa9.57□□□□□ -0.88
GPATCH4-209ENST00000498641 PLEKHG3A1L390 1219 aa9.56□□□□□ -0.88
GPATCH4-209ENST00000498641 NGDNQ8NEJ9 315 aaKnown RBP9.56□□□□□ -0.88
GPATCH4-209ENST00000498641 PNISRQ8TF01 805 aaKnown RBP9.56□□□□□ -0.88
GPATCH4-209ENST00000498641 GGNBP2Q9H3C7 697 aa9.56□□□□□ -0.88
GPATCH4-209ENST00000498641 ACEP12821 1306 aa9.56□□□□□ -0.88
GPATCH4-209ENST00000498641 CD163L1Q9NR16 1453 aa9.55□□□□□ -0.88
GPATCH4-209ENST00000498641 FYB1O15117 783 aa9.55□□□□□ -0.88
GPATCH4-209ENST00000498641 HNRNPUQ00839 825 aaKnown RBP eCLIP9.55□□□□□ -0.88
GPATCH4-209ENST00000498641 PMFBP1Q8TBY8 1022 aa9.55□□□□□ -0.88
GPATCH4-209ENST00000498641 CPSF1Q10570 1443 aaKnown RBP9.55□□□□□ -0.88
GPATCH4-209ENST00000498641 CHD2O14647 1828 aaKnown RBP9.54□□□□□ -0.88
GPATCH4-209ENST00000498641 DMRT2Q9Y5R5 561 aa9.54□□□□□ -0.88
GPATCH4-209ENST00000498641 EDC4Q6P2E9 1401 aaKnown RBP9.54□□□□□ -0.88
GPATCH4-209ENST00000498641 ANKARQ7Z5J8 1434 aa9.54□□□□□ -0.88
GPATCH4-209ENST00000498641 ADGRL3Q9HAR2 1447 aa9.54□□□□□ -0.88
GPATCH4-209ENST00000498641 ATF3P18847 181 aa9.53□□□□□ -0.88
GPATCH4-209ENST00000498641 WDR43Q15061 677 aaKnown RBP eCLIP9.53□□□□□ -0.88
GPATCH4-209ENST00000498641 C19orf44Q9H6X5 657 aa9.53□□□□□ -0.88
GPATCH4-209ENST00000498641 NKTRP30414 1462 aaKnown RBP9.53□□□□□ -0.88
GPATCH4-209ENST00000498641 NWD1Q149M9 1564 aa9.52□□□□□ -0.89
GPATCH4-209ENST00000498641 ESCO1Q5FWF5 840 aa9.52□□□□□ -0.89
GPATCH4-209ENST00000498641 CDC42BPGQ6DT37 1551 aa9.52□□□□□ -0.89
GPATCH4-209ENST00000498641 NME9Q86XW9 330 aa9.52□□□□□ -0.89
GPATCH4-209ENST00000498641 COG3Q96JB2 828 aa9.52□□□□□ -0.89
GPATCH4-209ENST00000498641 CFAP53Q96M91 514 aa9.52□□□□□ -0.89
GPATCH4-209ENST00000498641 PHF8Q9UPP1 1060 aa9.52□□□□□ -0.89
GPATCH4-209ENST00000498641 USP32Q8NFA0 1604 aa9.52□□□□□ -0.89
GPATCH4-209ENST00000498641 TTC21BQ7Z4L5 1316 aa9.52□□□□□ -0.89
GPATCH4-209ENST00000498641 TMEM94Q12767 1356 aa9.51□□□□□ -0.89
GPATCH4-209ENST00000498641 MTHFSP49914 203 aa9.51□□□□□ -0.89
GPATCH4-209ENST00000498641 MSH5O43196 834 aa9.5□□□□□ -0.89
GPATCH4-209ENST00000498641 ZRANB1Q9UGI0 708 aa9.5□□□□□ -0.89
GPATCH4-209ENST00000498641 ZNF335Q9H4Z2 1342 aaPredicted RBP9.5□□□□□ -0.89
GPATCH4-209ENST00000498641 POLR3AO14802 1390 aaPredicted RBP9.5□□□□□ -0.89
GPATCH4-209ENST00000498641 USP6P35125 1406 aa9.49□□□□□ -0.89
GPATCH4-209ENST00000498641 NCOA3Q9Y6Q9 1424 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms