RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 SREK1Q8WXA9 508 aaKnown RBP9.93□□□□□ -0.82
PDCD4-211ENST00000498367 RBM33Q96EV2 1170 aaKnown RBP9.93□□□□□ -0.82
PDCD4-211ENST00000498367 IRX2Q9BZI1 471 aaPredicted RBP9.93□□□□□ -0.82
PDCD4-211ENST00000498367 SEPT9Q9UHD8 586 aaPredicted RBP9.93□□□□□ -0.82
PDCD4-211ENST00000498367 SEMA3EO15041 775 aa9.92□□□□□ -0.82
PDCD4-211ENST00000498367 SPDYE16A6NNV3 312 aaPredicted RBP9.91□□□□□ -0.82
PDCD4-211ENST00000498367 FAM98CQ17RN3 349 aaKnown RBP9.91□□□□□ -0.82
PDCD4-211ENST00000498367 NYAP1Q6ZVC0 841 aa9.91□□□□□ -0.82
PDCD4-211ENST00000498367 HIRIP3Q9BW71 556 aaPredicted RBP9.91□□□□□ -0.82
PDCD4-211ENST00000498367 RBM47A0AV96 593 aaKnown RBP9.9□□□□□ -0.82
PDCD4-211ENST00000498367 PTMAP06454 111 aaKnown RBP9.9□□□□□ -0.82
PDCD4-211ENST00000498367 SND1Q7KZF4 910 aaKnown RBP eCLIP9.9□□□□□ -0.82
PDCD4-211ENST00000498367 FAM117AQ9C073 453 aa9.9□□□□□ -0.82
PDCD4-211ENST00000498367 GOPCQ9HD26 462 aa9.9□□□□□ -0.82
PDCD4-211ENST00000498367 WBP1LQ9NX94 342 aa9.9□□□□□ -0.82
PDCD4-211ENST00000498367 TSKSQ9UJT2 592 aa9.9□□□□□ -0.82
PDCD4-211ENST00000498367 TRIM66O15016 1216 aa9.89□□□□□ -0.83
PDCD4-211ENST00000498367 TPD52L2O43399 206 aaKnown RBP9.89□□□□□ -0.83
PDCD4-211ENST00000498367 GRIPAP1Q4V328 841 aa9.89□□□□□ -0.83
PDCD4-211ENST00000498367 UNCXA6NJT0 531 aa9.88□□□□□ -0.83
PDCD4-211ENST00000498367 PRIM1P49642 420 aaKnown RBP9.88□□□□□ -0.83
PDCD4-211ENST00000498367 C8orf37Q96NL8 207 aa9.88□□□□□ -0.83
PDCD4-211ENST00000498367 PRDM10Q9NQV6 1147 aa9.88□□□□□ -0.83
PDCD4-211ENST00000498367 TCF3P15923 654 aa9.87□□□□□ -0.83
PDCD4-211ENST00000498367 SPTY2D1Q68D10 685 aaPredicted RBP9.87□□□□□ -0.83
PDCD4-211ENST00000498367 UBXN4Q92575 508 aa9.87□□□□□ -0.83
PDCD4-211ENST00000498367 PPME1Q9Y570 386 aa9.87□□□□□ -0.83
PDCD4-211ENST00000498367 MAP3K7O43318 606 aa9.86□□□□□ -0.83
PDCD4-211ENST00000498367 E2F4Q16254 413 aa9.86□□□□□ -0.83
PDCD4-211ENST00000498367 ERCC3P19447 782 aa9.85□□□□□ -0.83
PDCD4-211ENST00000498367 MCM6Q14566 821 aa9.85□□□□□ -0.83
PDCD4-211ENST00000498367 CNPY4Q8N129 248 aa9.85□□□□□ -0.83
PDCD4-211ENST00000498367 FNBP4Q8N3X1 1017 aaPredicted RBP9.85□□□□□ -0.83
PDCD4-211ENST00000498367 MCCD1P59942 119 aaPredicted RBP9.84□□□□□ -0.83
PDCD4-211ENST00000498367 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.84□□□□□ -0.83
PDCD4-211ENST00000498367 FAM198AQ9UFP1 575 aa9.84□□□□□ -0.83
PDCD4-211ENST00000498367 TSR3Q9UJK0 312 aaKnown RBP9.84□□□□□ -0.83
PDCD4-211ENST00000498367 USTQ9Y2C2 406 aa9.84□□□□□ -0.83
PDCD4-211ENST00000498367 PACS2Q86VP3 889 aa9.83□□□□□ -0.84
PDCD4-211ENST00000498367 LRCH3Q96II8 777 aa9.83□□□□□ -0.84
PDCD4-211ENST00000498367 RBM27Q9P2N5 1060 aaKnown RBP9.83□□□□□ -0.84
PDCD4-211ENST00000498367 HPS5Q9UPZ3 1129 aa9.83□□□□□ -0.84
PDCD4-211ENST00000498367 LAS1LQ9Y4W2 734 aaKnown RBP9.83□□□□□ -0.84
PDCD4-211ENST00000498367 GLIPR1L2Q4G1C9 344 aa9.82□□□□□ -0.84
PDCD4-211ENST00000498367 CCDC181Q5TID7 509 aa9.82□□□□□ -0.84
PDCD4-211ENST00000498367 CCER1Q8TC90 406 aaPredicted RBP9.82□□□□□ -0.84
PDCD4-211ENST00000498367 CDCA7LQ96GN5 454 aa9.82□□□□□ -0.84
PDCD4-211ENST00000498367 UBA5Q9GZZ9 404 aa9.82□□□□□ -0.84
PDCD4-211ENST00000498367 C3orf80F5H4A9 247 aa9.81□□□□□ -0.84
PDCD4-211ENST00000498367 PRSS12P56730 875 aa9.81□□□□□ -0.84
PDCD4-211ENST00000498367 SF3A1Q15459 793 aaKnown RBP9.81□□□□□ -0.84
PDCD4-211ENST00000498367 MORC4Q8TE76 937 aa9.81□□□□□ -0.84
PDCD4-211ENST00000498367 PLEKHG3A1L390 1219 aa9.8□□□□□ -0.84
PDCD4-211ENST00000498367 OSBPP22059 807 aa9.8□□□□□ -0.84
PDCD4-211ENST00000498367 KCNC4Q03721 635 aa9.8□□□□□ -0.84
PDCD4-211ENST00000498367 CERKQ8TCT0 537 aa9.8□□□□□ -0.84
PDCD4-211ENST00000498367 MAGEC2Q9UBF1 373 aaPredicted RBP9.8□□□□□ -0.84
PDCD4-211ENST00000498367 RALBP1Q15311 655 aa9.79□□□□□ -0.84
PDCD4-211ENST00000498367 GPIHBP1Q8IV16 184 aa9.79□□□□□ -0.84
PDCD4-211ENST00000498367 MICAL1Q8TDZ2 1067 aa9.79□□□□□ -0.84
PDCD4-211ENST00000498367 MRRFQ96E11 262 aaKnown RBP9.79□□□□□ -0.84
PDCD4-211ENST00000498367 PCMTD1Q96MG8 357 aaPredicted RBP9.79□□□□□ -0.84
PDCD4-211ENST00000498367 METTL14Q9HCE5 456 aaKnown RBP9.79□□□□□ -0.84
PDCD4-211ENST00000498367 TMTC2Q8N394 836 aa9.78□□□□□ -0.84
PDCD4-211ENST00000498367 SMAPO00193 183 aa9.77□□□□□ -0.85
PDCD4-211ENST00000498367 FAM50AQ14320 339 aaKnown RBP9.77□□□□□ -0.85
PDCD4-211ENST00000498367 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.85
PDCD4-211ENST00000498367 TERF2IPQ9NYB0 399 aa9.77□□□□□ -0.85
PDCD4-211ENST00000498367 SUGT1Q9Y2Z0 365 aa9.77□□□□□ -0.85
PDCD4-211ENST00000498367 IVNS1ABPQ9Y6Y0 642 aa9.77□□□□□ -0.85
PDCD4-211ENST00000498367 GRXCR2A6NFK2 248 aa9.76□□□□□ -0.85
PDCD4-211ENST00000498367 SAMD7Q7Z3H4 446 aa9.76□□□□□ -0.85
PDCD4-211ENST00000498367 CSB-PGBD3P0DP91 1061 aa9.75□□□□□ -0.85
PDCD4-211ENST00000498367 TATDN2Q93075 761 aa9.75□□□□□ -0.85
PDCD4-211ENST00000498367 NBPF26B4DH59 902 aa9.74□□□□□ -0.85
PDCD4-211ENST00000498367 ZC3H6P61129 1189 aaKnown RBP9.74□□□□□ -0.85
PDCD4-211ENST00000498367 TJAP1Q5JTD0 557 aa9.74□□□□□ -0.85
PDCD4-211ENST00000498367 TTC13Q8NBP0 860 aa9.74□□□□□ -0.85
PDCD4-211ENST00000498367 KIAA1522Q9P206 1035 aaPredicted RBP9.73□□□□□ -0.85
PDCD4-211ENST00000498367 PPP1R1BQ9UD71 204 aaPredicted RBP9.73□□□□□ -0.85
PDCD4-211ENST00000498367 PPP4CP60510 307 aa9.72□□□□□ -0.85
PDCD4-211ENST00000498367 OS9Q13438 667 aaPredicted RBP9.72□□□□□ -0.85
PDCD4-211ENST00000498367 ERICH6BQ5W0A0 696 aa9.72□□□□□ -0.85
PDCD4-211ENST00000498367 ZNF330Q9Y3S2 320 aaPredicted RBP9.72□□□□□ -0.85
PDCD4-211ENST00000498367 Q6ZNB5 142 aa9.71□□□□□ -0.86
PDCD4-211ENST00000498367 SIRT1Q96EB6 747 aa9.71□□□□□ -0.86
PDCD4-211ENST00000498367 NPDC1Q9NQX5 325 aaPredicted RBP9.71□□□□□ -0.86
PDCD4-211ENST00000498367 PNMA3Q9UL41 463 aa9.71□□□□□ -0.86
PDCD4-211ENST00000498367 EIF3JO75822 258 aaKnown RBP9.7□□□□□ -0.86
PDCD4-211ENST00000498367 SMC5Q8IY18 1101 aa9.7□□□□□ -0.86
PDCD4-211ENST00000498367 RBM26Q5T8P6 1007 aaKnown RBP9.69□□□□□ -0.86
PDCD4-211ENST00000498367 NUDT18Q6ZVK8 323 aa9.69□□□□□ -0.86
PDCD4-211ENST00000498367 APBB1IPQ7Z5R6 666 aaPredicted RBP9.69□□□□□ -0.86
PDCD4-211ENST00000498367 RAB11FIP3O75154 756 aa9.68□□□□□ -0.86
PDCD4-211ENST00000498367 LONRF3Q496Y0 759 aa9.68□□□□□ -0.86
PDCD4-211ENST00000498367 PBXIP1Q96AQ6 731 aa9.68□□□□□ -0.86
PDCD4-211ENST00000498367 MTRQ99707 1265 aa9.68□□□□□ -0.86
PDCD4-211ENST00000498367 RBM10P98175 930 aaKnown RBP9.67□□□□□ -0.86
PDCD4-211ENST00000498367 WWC1Q8IX03 1113 aa9.67□□□□□ -0.86
PDCD4-211ENST00000498367 POM121Q96HA1 1249 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms