RNA–Protein interactions for RNA: ENST00000497865.5

RND3-209, Transcript of Rho family GTPase 3, humanhuman

TSL 2

Gene RND3, Length 880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RND3-209ENST00000497865 FECHP22830 423 aa11.32□□□□□ -0.6
RND3-209ENST00000497865 NFX1Q12986 1120 aaKnown RBP11.31□□□□□ -0.6
RND3-209ENST00000497865 PRDM9Q9NQV7 894 aa11.31□□□□□ -0.6
RND3-209ENST00000497865 WIPF1O43516 503 aa11.3□□□□□ -0.6
RND3-209ENST00000497865 Q3C1V9 767 aa11.3□□□□□ -0.6
RND3-209ENST00000497865 TESPA1A2RU30 521 aaPredicted RBP11.29□□□□□ -0.6
RND3-209ENST00000497865 SENP2Q9HC62 589 aa11.29□□□□□ -0.6
RND3-209ENST00000497865 SMPD1P17405 629 aa11.28□□□□□ -0.6
RND3-209ENST00000497865 ATP13A2Q9NQ11 1180 aa11.28□□□□□ -0.6
RND3-209ENST00000497865 TRIM32Q13049 653 aa11.27□□□□□ -0.61
RND3-209ENST00000497865 RNF19BQ6ZMZ0 732 aa11.27□□□□□ -0.61
RND3-209ENST00000497865 NLRP7Q8WX94 980 aa11.26□□□□□ -0.61
RND3-209ENST00000497865 REPIN1Q9BWE0 567 aaKnown RBP11.25□□□□□ -0.61
RND3-209ENST00000497865 MMP16P51512 607 aa11.24□□□□□ -0.61
RND3-209ENST00000497865 MRGPRX2Q96LB1 330 aa11.24□□□□□ -0.61
RND3-209ENST00000497865 TERTO14746 1132 aaKnown RBP11.23□□□□□ -0.61
RND3-209ENST00000497865 KIFC2Q96AC6 838 aa11.23□□□□□ -0.61
RND3-209ENST00000497865 TRIM47Q96LD4 638 aa11.23□□□□□ -0.61
RND3-209ENST00000497865 J3QL48 77 aa11.22□□□□□ -0.61
RND3-209ENST00000497865 GPR37O15354 613 aa11.22□□□□□ -0.61
RND3-209ENST00000497865 SNRPBP14678 240 aaKnown RBP11.22□□□□□ -0.61
RND3-209ENST00000497865 PHOX2BQ99453 314 aa11.21□□□□□ -0.61
RND3-209ENST00000497865 USB1Q9BQ65 265 aaKnown RBP11.21□□□□□ -0.61
RND3-209ENST00000497865 DXOO77932 396 aaKnown RBP11.17□□□□□ -0.62
RND3-209ENST00000497865 HPS1Q92902 700 aa11.17□□□□□ -0.62
RND3-209ENST00000497865 KDM4AO75164 1064 aa11.16□□□□□ -0.62
RND3-209ENST00000497865 WNT7BP56706 349 aa11.16□□□□□ -0.62
RND3-209ENST00000497865 RC3H1Q5TC82 1133 aaKnown RBP11.16□□□□□ -0.62
RND3-209ENST00000497865 CCDC24Q8N4L8 307 aa11.16□□□□□ -0.62
RND3-209ENST00000497865 CD46P15529 392 aa11.15□□□□□ -0.62
RND3-209ENST00000497865 SLC16A10Q8TF71 515 aa11.15□□□□□ -0.62
RND3-209ENST00000497865 USP46P62068 366 aa11.14□□□□□ -0.63
RND3-209ENST00000497865 GPIHBP1Q8IV16 184 aa11.14□□□□□ -0.63
RND3-209ENST00000497865 FAM181BA6NEQ2 426 aa11.13□□□□□ -0.63
RND3-209ENST00000497865 LCE2CQ5TA81 110 aa11.1□□□□□ -0.63
RND3-209ENST00000497865 ALDH1A1P00352 501 aa11.09□□□□□ -0.63
RND3-209ENST00000497865 SKOR1P84550 965 aa11.09□□□□□ -0.63
RND3-209ENST00000497865 NXF1Q9UBU9 619 aaKnown RBP11.08□□□□□ -0.64
RND3-209ENST00000497865 NPAS3Q8IXF0 933 aa11.06□□□□□ -0.64
RND3-209ENST00000497865 JUNDP17535 347 aa11.05□□□□□ -0.64
RND3-209ENST00000497865 MAP2K5Q13163 448 aa11.05□□□□□ -0.64
RND3-209ENST00000497865 HOXA2O43364 376 aa11.03□□□□□ -0.64
RND3-209ENST00000497865 EHBP1Q8NDI1 1231 aa11.03□□□□□ -0.64
RND3-209ENST00000497865 IRF7Q92985 503 aa11.03□□□□□ -0.64
RND3-209ENST00000497865 WASF2Q9Y6W5 498 aa11.03□□□□□ -0.64
RND3-209ENST00000497865 CAPN5O15484 640 aaPredicted RBP11.02□□□□□ -0.65
RND3-209ENST00000497865 SIAH2O43255 324 aa11.02□□□□□ -0.65
RND3-209ENST00000497865 HLA-CQ95604 372 aa11.02□□□□□ -0.65
RND3-209ENST00000497865 IRF6O14896 467 aa11.01□□□□□ -0.65
RND3-209ENST00000497865 MDM2Q00987 491 aaPredicted RBP11.01□□□□□ -0.65
RND3-209ENST00000497865 ZSCAN1Q8NBB4 408 aa11□□□□□ -0.65
RND3-209ENST00000497865 NUDT12Q9BQG2 462 aa11□□□□□ -0.65
RND3-209ENST00000497865 RETREG3Q86VR2 466 aa10.99□□□□□ -0.65
RND3-209ENST00000497865 GMPRP36959 345 aa10.98□□□□□ -0.65
RND3-209ENST00000497865 MINK1Q8N4C8 1332 aaPredicted RBP10.98□□□□□ -0.65
RND3-209ENST00000497865 PTCRAQ6ISU1 281 aaPredicted RBP10.97□□□□□ -0.65
RND3-209ENST00000497865 TRIM46Q7Z4K8 759 aa10.97□□□□□ -0.65
RND3-209ENST00000497865 NUTM1Q86Y26 1132 aa10.97□□□□□ -0.65
RND3-209ENST00000497865 SYMPKQ92797 1274 aaKnown RBP10.97□□□□□ -0.65
RND3-209ENST00000497865 TULP1O00294 542 aaPredicted RBP10.96□□□□□ -0.65
RND3-209ENST00000497865 BMP1P13497 986 aa10.96□□□□□ -0.65
RND3-209ENST00000497865 GUCA2AQ02747 115 aa10.96□□□□□ -0.65
RND3-209ENST00000497865 CLCN1P35523 988 aa10.94□□□□□ -0.66
RND3-209ENST00000497865 GPCPD1Q9NPB8 672 aa10.94□□□□□ -0.66
RND3-209ENST00000497865 H3BM21 787 aa10.93□□□□□ -0.66
RND3-209ENST00000497865 SH3BP2P78314 561 aa10.93□□□□□ -0.66
RND3-209ENST00000497865 PLEKHG3A1L390 1219 aa10.92□□□□□ -0.66
RND3-209ENST00000497865 CCNYL3P0C7X3 344 aa10.92□□□□□ -0.66
RND3-209ENST00000497865 MS4A1P11836 297 aa10.92□□□□□ -0.66
RND3-209ENST00000497865 KRI1Q8N9T8 703 aaKnown RBP10.92□□□□□ -0.66
RND3-209ENST00000497865 FAM217BQ9NTX9 383 aaPredicted RBP10.91□□□□□ -0.66
RND3-209ENST00000497865 C6orf229H3BNL8 230 aa10.9□□□□□ -0.66
RND3-209ENST00000497865 FDX1P10109 184 aa10.9□□□□□ -0.66
RND3-209ENST00000497865 LORP23490 312 aaPredicted RBP10.9□□□□□ -0.66
RND3-209ENST00000497865 VEGFBP49765 207 aa10.9□□□□□ -0.66
RND3-209ENST00000497865 PLCB2Q00722 1185 aa10.9□□□□□ -0.66
RND3-209ENST00000497865 ZFP42Q96MM3 310 aa10.9□□□□□ -0.66
RND3-209ENST00000497865 EVA1BQ9NVM1 165 aa10.89□□□□□ -0.67
RND3-209ENST00000497865 SCARF1Q14162 830 aa10.88□□□□□ -0.67
RND3-209ENST00000497865 PTPRNQ16849 979 aa10.88□□□□□ -0.67
RND3-209ENST00000497865 MPNDQ8N594 471 aa10.88□□□□□ -0.67
RND3-209ENST00000497865 VARSP26640 1264 aaKnown RBP10.87□□□□□ -0.67
RND3-209ENST00000497865 CCDC102AQ96A19 550 aa10.87□□□□□ -0.67
RND3-209ENST00000497865 UNC93B1Q9H1C4 597 aa10.87□□□□□ -0.67
RND3-209ENST00000497865 BAP1Q92560 729 aa10.86□□□□□ -0.67
RND3-209ENST00000497865 ERBB4Q15303 1308 aa10.85□□□□□ -0.67
RND3-209ENST00000497865 KCNH2Q12809 1159 aa10.85□□□□□ -0.67
RND3-209ENST00000497865 PCDHGC3Q9UN70 934 aa10.85□□□□□ -0.67
RND3-209ENST00000497865 MRPL14Q6P1L8 145 aaKnown RBP10.84□□□□□ -0.67
RND3-209ENST00000497865 NNTQ13423 1086 aa10.83□□□□□ -0.68
RND3-209ENST00000497865 LINC01559Q495D7 138 aa10.83□□□□□ -0.68
RND3-209ENST00000497865 ZNF511Q8NB15 262 aa10.82□□□□□ -0.68
RND3-209ENST00000497865 TLL2Q9Y6L7 1015 aa10.82□□□□□ -0.68
RND3-209ENST00000497865 SPDYE5A6NIY4 337 aa10.81□□□□□ -0.68
RND3-209ENST00000497865 ADH1CP00326 375 aa10.8□□□□□ -0.68
RND3-209ENST00000497865 DESI1Q6ICB0 168 aa10.8□□□□□ -0.68
RND3-209ENST00000497865 PURBQ96QR8 312 aaKnown RBP10.8□□□□□ -0.68
RND3-209ENST00000497865 SSTR3P32745 418 aaPredicted RBP10.79□□□□□ -0.68
RND3-209ENST00000497865 WDR4P57081 412 aaKnown RBP10.79□□□□□ -0.68
RND3-209ENST00000497865 PRR7Q8TB68 274 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms