RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 RNF19BQ6ZMZ0 732 aa9.52□□□□□ -0.89
CD46-218ENST00000496723 PRDM9Q9NQV7 894 aa9.52□□□□□ -0.89
CD46-218ENST00000496723 AAASQ9NRG9 546 aa9.52□□□□□ -0.89
CD46-218ENST00000496723 MMP16P51512 607 aa9.51□□□□□ -0.89
CD46-218ENST00000496723 CYP4X1Q8N118 509 aa9.51□□□□□ -0.89
CD46-218ENST00000496723 AVPP01185 164 aa9.5□□□□□ -0.89
CD46-218ENST00000496723 USB1Q9BQ65 265 aaKnown RBP9.49□□□□□ -0.89
CD46-218ENST00000496723 POTECB2RU33 542 aa9.48□□□□□ -0.89
CD46-218ENST00000496723 MDM2Q00987 491 aaPredicted RBP9.48□□□□□ -0.89
CD46-218ENST00000496723 CTC1Q2NKJ3 1217 aa9.48□□□□□ -0.89
CD46-218ENST00000496723 WNT7AO00755 349 aa9.47□□□□□ -0.89
CD46-218ENST00000496723 ST8SIA5O15466 376 aa9.47□□□□□ -0.89
CD46-218ENST00000496723 DXOO77932 396 aaKnown RBP9.46□□□□□ -0.9
CD46-218ENST00000496723 CLCN1P35523 988 aa9.45□□□□□ -0.9
CD46-218ENST00000496723 SMCPP49901 116 aaPredicted RBP9.45□□□□□ -0.9
CD46-218ENST00000496723 TRIM32Q13049 653 aa9.45□□□□□ -0.9
CD46-218ENST00000496723 TTC24A2A3L6 582 aaPredicted RBP9.44□□□□□ -0.9
CD46-218ENST00000496723 AXIN1O15169 862 aa9.44□□□□□ -0.9
CD46-218ENST00000496723 CCDC102AQ96A19 550 aa9.44□□□□□ -0.9
CD46-218ENST00000496723 GPCPD1Q9NPB8 672 aa9.44□□□□□ -0.9
CD46-218ENST00000496723 HOXA2O43364 376 aa9.43□□□□□ -0.9
CD46-218ENST00000496723 SNIP1Q8TAD8 396 aaKnown RBP9.43□□□□□ -0.9
CD46-218ENST00000496723 REPIN1Q9BWE0 567 aaKnown RBP9.42□□□□□ -0.9
CD46-218ENST00000496723 FAM217BQ9NTX9 383 aaPredicted RBP9.42□□□□□ -0.9
CD46-218ENST00000496723 KRI1Q8N9T8 703 aaKnown RBP9.41□□□□□ -0.9
CD46-218ENST00000496723 NUTM1Q86Y26 1132 aa9.39□□□□□ -0.91
CD46-218ENST00000496723 HLA-CQ95604 372 aa9.39□□□□□ -0.91
CD46-218ENST00000496723 MRGPRX2Q96LB1 330 aa9.39□□□□□ -0.91
CD46-218ENST00000496723 SMPD1P17405 629 aa9.38□□□□□ -0.91
CD46-218ENST00000496723 WNT7BP56706 349 aa9.38□□□□□ -0.91
CD46-218ENST00000496723 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
CD46-218ENST00000496723 DACH1Q9UI36 760 aa9.38□□□□□ -0.91
CD46-218ENST00000496723 JUNDP17535 347 aa9.37□□□□□ -0.91
CD46-218ENST00000496723 TREML4Q6UXN2 200 aa9.37□□□□□ -0.91
CD46-218ENST00000496723 CCDC24Q8N4L8 307 aa9.37□□□□□ -0.91
CD46-218ENST00000496723 C11orf95C9JLR9 678 aaPredicted RBP9.36□□□□□ -0.91
CD46-218ENST00000496723 RETREG3Q86VR2 466 aa9.36□□□□□ -0.91
CD46-218ENST00000496723 GMPR2Q9P2T1 348 aaKnown RBP9.35□□□□□ -0.91
CD46-218ENST00000496723 GUCA2AQ02747 115 aa9.34□□□□□ -0.91
CD46-218ENST00000496723 LCE2AQ5TA79 106 aaPredicted RBP9.34□□□□□ -0.91
CD46-218ENST00000496723 RC3H1Q5TC82 1133 aaKnown RBP9.34□□□□□ -0.91
CD46-218ENST00000496723 J3QL48 77 aa9.33□□□□□ -0.92
CD46-218ENST00000496723 FDX1P10109 184 aa9.32□□□□□ -0.92
CD46-218ENST00000496723 SSTR3P32745 418 aaPredicted RBP9.32□□□□□ -0.92
CD46-218ENST00000496723 SKOR1P84550 965 aa9.31□□□□□ -0.92
CD46-218ENST00000496723 SYMPKQ92797 1274 aaKnown RBP9.31□□□□□ -0.92
CD46-218ENST00000496723 NUDT12Q9BQG2 462 aa9.31□□□□□ -0.92
CD46-218ENST00000496723 SENP2Q9HC62 589 aa9.31□□□□□ -0.92
CD46-218ENST00000496723 ATP13A2Q9NQ11 1180 aa9.31□□□□□ -0.92
CD46-218ENST00000496723 BARGINQ6ZT62 677 aa9.3□□□□□ -0.92
CD46-218ENST00000496723 C6orf229H3BNL8 230 aa9.29□□□□□ -0.92
CD46-218ENST00000496723 BCANQ96GW7 911 aa9.29□□□□□ -0.92
CD46-218ENST00000496723 PCDHGC3Q9UN70 934 aa9.29□□□□□ -0.92
CD46-218ENST00000496723 ZMYND10O75800 440 aa9.28□□□□□ -0.92
CD46-218ENST00000496723 WFS1O76024 890 aa9.28□□□□□ -0.92
CD46-218ENST00000496723 MS4A1P11836 297 aa9.28□□□□□ -0.92
CD46-218ENST00000496723 AMHR2Q16671 573 aa9.28□□□□□ -0.92
CD46-218ENST00000496723 SPIRE2Q8WWL2 714 aa9.28□□□□□ -0.92
CD46-218ENST00000496723 HPS1Q92902 700 aa9.28□□□□□ -0.92
CD46-218ENST00000496723 TRIM47Q96LD4 638 aa9.28□□□□□ -0.92
CD46-218ENST00000496723 SPDYE5A6NIY4 337 aa9.27□□□□□ -0.93
CD46-218ENST00000496723 CCNYL3P0C7X3 344 aa9.27□□□□□ -0.93
CD46-218ENST00000496723 TTLL12Q14166 644 aaPredicted RBP9.27□□□□□ -0.93
CD46-218ENST00000496723 ALDH1A1P00352 501 aa9.26□□□□□ -0.93
CD46-218ENST00000496723 PTPRNQ16849 979 aa9.26□□□□□ -0.93
CD46-218ENST00000496723 PTCRAQ6ISU1 281 aaPredicted RBP9.26□□□□□ -0.93
CD46-218ENST00000496723 EHBP1Q8NDI1 1231 aa9.26□□□□□ -0.93
CD46-218ENST00000496723 KIFC2Q96AC6 838 aa9.26□□□□□ -0.93
CD46-218ENST00000496723 SIAH2O43255 324 aa9.25□□□□□ -0.93
CD46-218ENST00000496723 GJA5P36382 358 aa9.25□□□□□ -0.93
CD46-218ENST00000496723 DESI1Q6ICB0 168 aa9.25□□□□□ -0.93
CD46-218ENST00000496723 EVA1BQ9NVM1 165 aa9.25□□□□□ -0.93
CD46-218ENST00000496723 NFX1Q12986 1120 aaKnown RBP9.24□□□□□ -0.93
CD46-218ENST00000496723 DIXDC1Q155Q3 683 aa9.24□□□□□ -0.93
CD46-218ENST00000496723 MOXD2PA6NHM9 499 aa9.23□□□□□ -0.93
CD46-218ENST00000496723 SNRPBP14678 240 aaKnown RBP9.23□□□□□ -0.93
CD46-218ENST00000496723 GIGYF2Q6Y7W6 1299 aaKnown RBP9.23□□□□□ -0.93
CD46-218ENST00000496723 NDUFV2P19404 249 aa9.22□□□□□ -0.93
CD46-218ENST00000496723 MTMR2Q13614 643 aa9.22□□□□□ -0.93
CD46-218ENST00000496723 PRR7Q8TB68 274 aa9.22□□□□□ -0.93
CD46-218ENST00000496723 ZC3H15Q8WU90 426 aaKnown RBP9.22□□□□□ -0.93
CD46-218ENST00000496723 SH3BP2P78314 561 aa9.21□□□□□ -0.94
CD46-218ENST00000496723 BEGAINQ9BUH8 593 aa9.21□□□□□ -0.94
CD46-218ENST00000496723 WASF2Q9Y6W5 498 aa9.21□□□□□ -0.94
CD46-218ENST00000496723 WIPF1O43516 503 aa9.2□□□□□ -0.94
CD46-218ENST00000496723 KCNH2Q12809 1159 aa9.2□□□□□ -0.94
CD46-218ENST00000496723 UNC93B1Q9H1C4 597 aa9.2□□□□□ -0.94
CD46-218ENST00000496723 TERTO14746 1132 aaKnown RBP9.19□□□□□ -0.94
CD46-218ENST00000496723 MPNDQ8N594 471 aa9.19□□□□□ -0.94
CD46-218ENST00000496723 PLEKHG3A1L390 1219 aa9.17□□□□□ -0.94
CD46-218ENST00000496723 CAPN5O15484 640 aaPredicted RBP9.17□□□□□ -0.94
CD46-218ENST00000496723 VARSP26640 1264 aaKnown RBP9.17□□□□□ -0.94
CD46-218ENST00000496723 BAP1Q92560 729 aa9.17□□□□□ -0.94
CD46-218ENST00000496723 INSM1Q01101 510 aaPredicted RBP9.16□□□□□ -0.94
CD46-218ENST00000496723 RSBN1LQ6PCB5 846 aaPredicted RBP9.16□□□□□ -0.94
CD46-218ENST00000496723 ZNF511Q8NB15 262 aa9.16□□□□□ -0.94
CD46-218ENST00000496723 TBC1D2Q9BYX2 928 aa9.16□□□□□ -0.94
CD46-218ENST00000496723 LYPD8Q6UX82 237 aa9.15□□□□□ -0.94
CD46-218ENST00000496723 STK17AQ9UEE5 414 aa9.15□□□□□ -0.94
CD46-218ENST00000496723 SPTLC1O15269 473 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms