RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 BRINP3Q76B58 766 aa26.5■■□□□ 1.83
COPS6-210ENST00000496358 L3MBTL2Q969R5 705 aa26.49■■□□□ 1.83
COPS6-210ENST00000496358 CDC42BPGQ6DT37 1551 aa26.47■■□□□ 1.83
COPS6-210ENST00000496358 TRAK1Q9UPV9 953 aa26.47■■□□□ 1.83
COPS6-210ENST00000496358 DLC1Q96QB1 1528 aa26.46■■□□□ 1.83
COPS6-210ENST00000496358 KIAA1210Q9ULL0 1709 aa26.46■■□□□ 1.83
COPS6-210ENST00000496358 PRAM1Q96QH2 718 aa26.46■■□□□ 1.83
COPS6-210ENST00000496358 POGKQ9P215 609 aa26.46■■□□□ 1.83
COPS6-210ENST00000496358 C1orf167Q5SNV9 1468 aa26.46■■□□□ 1.83
COPS6-210ENST00000496358 PCGF6Q9BYE7 350 aa26.45■■□□□ 1.82
COPS6-210ENST00000496358 AHDC1Q5TGY3 1603 aaPredicted RBP26.44■■□□□ 1.82
COPS6-210ENST00000496358 SAFB2Q14151 953 aaKnown RBP eCLIP26.44■■□□□ 1.82
COPS6-210ENST00000496358 COL16A1Q07092 1604 aaPredicted RBP26.42■■□□□ 1.82
COPS6-210ENST00000496358 ORAI2Q96SN7 254 aa26.4■■□□□ 1.82
COPS6-210ENST00000496358 NHSL1Q5SYE7 1610 aa26.39■■□□□ 1.82
COPS6-210ENST00000496358 NUTM2FA1L443 756 aa26.39■■□□□ 1.82
COPS6-210ENST00000496358 FMN2Q9NZ56 1722 aa26.38■■□□□ 1.81
COPS6-210ENST00000496358 ARHGEF28Q8N1W1 1705 aaKnown RBP26.37■■□□□ 1.81
COPS6-210ENST00000496358 NBPF1Q3BBV0 1214 aa26.37■■□□□ 1.81
COPS6-210ENST00000496358 JCADQ9P266 1359 aa26.36■■□□□ 1.81
COPS6-210ENST00000496358 ESCO1Q5FWF5 840 aa26.36■■□□□ 1.81
COPS6-210ENST00000496358 DDX17Q92841 729 aaKnown RBP26.35■■□□□ 1.81
COPS6-210ENST00000496358 TONSLQ96HA7 1378 aa26.33■■□□□ 1.81
COPS6-210ENST00000496358 HIRIP3Q9BW71 556 aaPredicted RBP26.32■■□□□ 1.8
COPS6-210ENST00000496358 RGPD8O14715 1765 aaPredicted RBP26.32■■□□□ 1.8
COPS6-210ENST00000496358 MINK1Q8N4C8 1332 aaPredicted RBP26.32■■□□□ 1.8
COPS6-210ENST00000496358 TRPM1Q7Z4N2 1603 aa26.31■■□□□ 1.8
COPS6-210ENST00000496358 ADGRB2O60241 1585 aa26.3■■□□□ 1.8
COPS6-210ENST00000496358 LRRC59Q96AG4 307 aaKnown RBP26.3■■□□□ 1.8
COPS6-210ENST00000496358 SHPRHQ149N8 1683 aa26.29■■□□□ 1.8
COPS6-210ENST00000496358 NPHP3Q7Z494 1330 aa26.26■■□□□ 1.79
COPS6-210ENST00000496358 FOXO3O43524 673 aa26.25■■□□□ 1.79
COPS6-210ENST00000496358 KIF1AQ12756 1690 aa26.25■■□□□ 1.79
COPS6-210ENST00000496358 SOS2Q07890 1332 aaPredicted RBP26.24■■□□□ 1.79
COPS6-210ENST00000496358 SPATA31A6Q5VVP1 1343 aa26.24■■□□□ 1.79
COPS6-210ENST00000496358 WASLO00401 505 aaPredicted RBP26.24■■□□□ 1.79
COPS6-210ENST00000496358 NBPF8Q3BBV2 869 aa26.24■■□□□ 1.79
COPS6-210ENST00000496358 ROCK2O75116 1388 aaKnown RBP26.23■■□□□ 1.79
COPS6-210ENST00000496358 EIF3AQ14152 1382 aaKnown RBP26.22■■□□□ 1.79
COPS6-210ENST00000496358 ANKARQ7Z5J8 1434 aa26.22■■□□□ 1.79
COPS6-210ENST00000496358 USP32Q8NFA0 1604 aa26.21■■□□□ 1.79
COPS6-210ENST00000496358 PHF8Q9UPP1 1060 aa26.21■■□□□ 1.79
COPS6-210ENST00000496358 CENPJQ9HC77 1338 aaPredicted RBP26.19■■□□□ 1.78
COPS6-210ENST00000496358 XPCQ01831 940 aaPredicted RBP26.19■■□□□ 1.78
COPS6-210ENST00000496358 TULP4Q9NRJ4 1543 aa26.19■■□□□ 1.78
COPS6-210ENST00000496358 NUTM2BA6NNL0 878 aaPredicted RBP26.18■■□□□ 1.78
COPS6-210ENST00000496358 NUTM2EB1AL46 878 aaPredicted RBP26.18■■□□□ 1.78
COPS6-210ENST00000496358 NUTM2AQ8IVF1 878 aaPredicted RBP26.18■■□□□ 1.78
COPS6-210ENST00000496358 PNPLA6Q8IY17 1366 aa26.18■■□□□ 1.78
COPS6-210ENST00000496358 PXDNQ92626 1479 aa26.17■■□□□ 1.78
COPS6-210ENST00000496358 RGS17Q9UGC6 210 aaPredicted RBP26.17■■□□□ 1.78
COPS6-210ENST00000496358 QRICH2Q9H0J4 1663 aa26.16■■□□□ 1.78
COPS6-210ENST00000496358 MEX3CQ5U5Q3 659 aaKnown RBP26.16■■□□□ 1.78
COPS6-210ENST00000496358 CDK19Q9BWU1 502 aa26.16■■□□□ 1.78
COPS6-210ENST00000496358 CLSPNQ9HAW4 1339 aa26.15■■□□□ 1.78
COPS6-210ENST00000496358 LRP6O75581 1613 aa26.15■■□□□ 1.78
COPS6-210ENST00000496358 PMFBP1Q8TBY8 1022 aa26.15■■□□□ 1.78
COPS6-210ENST00000496358 PRR36Q9H6K5 1346 aa26.14■■□□□ 1.78
COPS6-210ENST00000496358 KRT28Q7Z3Y7 464 aa26.14■■□□□ 1.78
COPS6-210ENST00000496358 ITSN1Q15811 1721 aa26.13■■□□□ 1.77
COPS6-210ENST00000496358 GPRASP1Q5JY77 1395 aa26.12■■□□□ 1.77
COPS6-210ENST00000496358 PSME1Q06323 249 aa26.12■■□□□ 1.77
COPS6-210ENST00000496358 NUDT16Q96DE0 195 aaKnown RBP26.12■■□□□ 1.77
COPS6-210ENST00000496358 CARD11Q9BXL7 1154 aa26.12■■□□□ 1.77
COPS6-210ENST00000496358 RALGAPBQ86X10 1494 aa26.11■■□□□ 1.77
COPS6-210ENST00000496358 CCER1Q8TC90 406 aaPredicted RBP26.11■■□□□ 1.77
COPS6-210ENST00000496358 ATP7BP35670 1465 aa26.09■■□□□ 1.77
COPS6-210ENST00000496358 SRPK2P78362 688 aaKnown RBP26.08■■□□□ 1.77
COPS6-210ENST00000496358 COL22A1Q8NFW1 1626 aaPredicted RBP26.07■■□□□ 1.76
COPS6-210ENST00000496358 NGDNQ8NEJ9 315 aaKnown RBP26.07■■□□□ 1.76
COPS6-210ENST00000496358 SPATA31A3Q5VYP0 1347 aa26.07■■□□□ 1.76
COPS6-210ENST00000496358 TIMELESSQ9UNS1 1208 aa26.05■■□□□ 1.76
COPS6-210ENST00000496358 CCDC61Q9Y6R9 512 aa26.04■■□□□ 1.76
COPS6-210ENST00000496358 TOPAZ1Q8N9V7 1692 aa26.03■■□□□ 1.76
COPS6-210ENST00000496358 CABP2Q9NPB3 220 aa26.03■■□□□ 1.76
COPS6-210ENST00000496358 SBNO1A3KN83 1393 aa26.03■■□□□ 1.76
COPS6-210ENST00000496358 TNS3Q68CZ2 1445 aa26.03■■□□□ 1.76
COPS6-210ENST00000496358 ADAMTS2O95450 1211 aa26.02■■□□□ 1.76
COPS6-210ENST00000496358 LMOD2Q6P5Q4 547 aa26.02■■□□□ 1.76
COPS6-210ENST00000496358 EVC2Q86UK5 1308 aa26.02■■□□□ 1.76
COPS6-210ENST00000496358 POTEAQ6S8J7 498 aa26.01■■□□□ 1.75
COPS6-210ENST00000496358 C8orf37Q96NL8 207 aa26■■□□□ 1.75
COPS6-210ENST00000496358 TRPM3Q9HCF6 1732 aaPredicted RBP25.99■■□□□ 1.75
COPS6-210ENST00000496358 ZNF772Q68DY9 489 aaPredicted RBP25.98■■□□□ 1.75
COPS6-210ENST00000496358 ARHGEF10O15013 1369 aa25.97■■□□□ 1.75
COPS6-210ENST00000496358 PLEKHG3A1L390 1219 aa25.97■■□□□ 1.75
COPS6-210ENST00000496358 PPIP5K1Q6PFW1 1433 aa25.97■■□□□ 1.75
COPS6-210ENST00000496358 ACEP12821 1306 aa25.96■■□□□ 1.75
COPS6-210ENST00000496358 AFF2P51816 1311 aa25.96■■□□□ 1.75
COPS6-210ENST00000496358 PAK3O75914 559 aaPredicted RBP25.96■■□□□ 1.75
COPS6-210ENST00000496358 NGLY1Q96IV0 654 aa25.96■■□□□ 1.75
COPS6-210ENST00000496358 MARF1Q9Y4F3 1742 aaKnown RBP25.96■■□□□ 1.75
COPS6-210ENST00000496358 PLEKHG5O94827 1062 aa25.95■■□□□ 1.74
COPS6-210ENST00000496358 POLR3AO14802 1390 aaPredicted RBP25.95■■□□□ 1.74
COPS6-210ENST00000496358 HAP1P54257 671 aaPredicted RBP25.94■■□□□ 1.74
COPS6-210ENST00000496358 SBNO2Q9Y2G9 1366 aa25.94■■□□□ 1.74
COPS6-210ENST00000496358 ALS2Q96Q42 1657 aa25.93■■□□□ 1.74
COPS6-210ENST00000496358 CABP1Q9NZU7 370 aa25.92■■□□□ 1.74
COPS6-210ENST00000496358 CABLES1Q8TDN4 633 aa25.91■■□□□ 1.74
COPS6-210ENST00000496358 ABCA3Q99758 1704 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms