RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 CENPJQ9HC77 1338 aaPredicted RBP19.09■□□□□ 0.65
PTPN7-218ENST00000496197 HSPA5P11021 654 aaKnown RBP19.09■□□□□ 0.65
PTPN7-218ENST00000496197 EIF3AQ14152 1382 aaKnown RBP19.08■□□□□ 0.65
PTPN7-218ENST00000496197 ADGRL3Q9HAR2 1447 aa19.08■□□□□ 0.64
PTPN7-218ENST00000496197 TULP4Q9NRJ4 1543 aa19.08■□□□□ 0.64
PTPN7-218ENST00000496197 POGKQ9P215 609 aa19.08■□□□□ 0.64
PTPN7-218ENST00000496197 FMN2Q9NZ56 1722 aa19.07■□□□□ 0.64
PTPN7-218ENST00000496197 MINK1Q8N4C8 1332 aaPredicted RBP19.06■□□□□ 0.64
PTPN7-218ENST00000496197 RGPD8O14715 1765 aaPredicted RBP19.06■□□□□ 0.64
PTPN7-218ENST00000496197 CDC42BPGQ6DT37 1551 aa19.06■□□□□ 0.64
PTPN7-218ENST00000496197 TESK2Q96S53 571 aa19.06■□□□□ 0.64
PTPN7-218ENST00000496197 EIF4G2P78344 907 aaKnown RBP eCLIP19.05■□□□□ 0.64
PTPN7-218ENST00000496197 USP32Q8NFA0 1604 aa19.04■□□□□ 0.64
PTPN7-218ENST00000496197 NCOA3Q9Y6Q9 1424 aa19.04■□□□□ 0.64
PTPN7-218ENST00000496197 SBNO2Q9Y2G9 1366 aa19.03■□□□□ 0.64
PTPN7-218ENST00000496197 DISP3Q9P2K9 1392 aa19■□□□□ 0.63
PTPN7-218ENST00000496197 C14orf37Q86TY3 774 aa19■□□□□ 0.63
PTPN7-218ENST00000496197 TOPAZ1Q8N9V7 1692 aa18.98■□□□□ 0.63
PTPN7-218ENST00000496197 MSH6P52701 1360 aa18.98■□□□□ 0.63
PTPN7-218ENST00000496197 DCCP43146 1447 aa18.98■□□□□ 0.63
PTPN7-218ENST00000496197 C11orf95C9JLR9 678 aaPredicted RBP18.97■□□□□ 0.63
PTPN7-218ENST00000496197 C19orf44Q9H6X5 657 aa18.97■□□□□ 0.63
PTPN7-218ENST00000496197 WASLO00401 505 aaPredicted RBP18.97■□□□□ 0.63
PTPN7-218ENST00000496197 CERKQ8TCT0 537 aa18.97■□□□□ 0.63
PTPN7-218ENST00000496197 IQSEC2Q5JU85 1478 aa18.96■□□□□ 0.63
PTPN7-218ENST00000496197 MYOM1P52179 1685 aa18.96■□□□□ 0.63
PTPN7-218ENST00000496197 NUTM2FA1L443 756 aa18.96■□□□□ 0.63
PTPN7-218ENST00000496197 ATP7BP35670 1465 aa18.96■□□□□ 0.63
PTPN7-218ENST00000496197 MST1RQ04912 1400 aa18.96■□□□□ 0.63
PTPN7-218ENST00000496197 PRR36Q9H6K5 1346 aa18.95■□□□□ 0.62
PTPN7-218ENST00000496197 CDK19Q9BWU1 502 aa18.95■□□□□ 0.62
PTPN7-218ENST00000496197 CABP2Q9NPB3 220 aa18.94■□□□□ 0.62
PTPN7-218ENST00000496197 ITSN1Q15811 1721 aa18.94■□□□□ 0.62
PTPN7-218ENST00000496197 EVC2Q86UK5 1308 aa18.92■□□□□ 0.62
PTPN7-218ENST00000496197 C1orf167Q5SNV9 1468 aa18.92■□□□□ 0.62
PTPN7-218ENST00000496197 TMF1P82094 1093 aa18.9■□□□□ 0.62
PTPN7-218ENST00000496197 ATF3P18847 181 aa18.9■□□□□ 0.62
PTPN7-218ENST00000496197 SRPK2P78362 688 aaKnown RBP18.9■□□□□ 0.62
PTPN7-218ENST00000496197 CADPS2Q86UW7 1296 aa18.9■□□□□ 0.62
PTPN7-218ENST00000496197 ROBO1Q9Y6N7 1651 aa18.89■□□□□ 0.61
PTPN7-218ENST00000496197 ANKARQ7Z5J8 1434 aa18.89■□□□□ 0.61
PTPN7-218ENST00000496197 KIF7Q2M1P5 1343 aa18.87■□□□□ 0.61
PTPN7-218ENST00000496197 FBXO41Q8TF61 875 aa18.87■□□□□ 0.61
PTPN7-218ENST00000496197 NUDT16Q96DE0 195 aaKnown RBP18.87■□□□□ 0.61
PTPN7-218ENST00000496197 WASHC2AQ641Q2 1341 aa18.86■□□□□ 0.61
PTPN7-218ENST00000496197 AKAP12Q02952 1782 aa18.86■□□□□ 0.61
PTPN7-218ENST00000496197 ORAI2Q96SN7 254 aa18.86■□□□□ 0.61
PTPN7-218ENST00000496197 SLAIN2Q9P270 581 aa18.85■□□□□ 0.61
PTPN7-218ENST00000496197 KIF1AQ12756 1690 aa18.85■□□□□ 0.61
PTPN7-218ENST00000496197 PPIP5K1Q6PFW1 1433 aa18.85■□□□□ 0.61
PTPN7-218ENST00000496197 CCDC7Q96M83 1385 aa18.84■□□□□ 0.61
PTPN7-218ENST00000496197 CD163L1Q9NR16 1453 aa18.84■□□□□ 0.61
PTPN7-218ENST00000496197 NHSL1Q5SYE7 1610 aa18.83■□□□□ 0.61
PTPN7-218ENST00000496197 ATAD2Q6PL18 1390 aa18.83■□□□□ 0.6
PTPN7-218ENST00000496197 UBAP1LF5GYI3 381 aa18.83■□□□□ 0.6
PTPN7-218ENST00000496197 POLR3GLQ9BT43 218 aa18.83■□□□□ 0.6
PTPN7-218ENST00000496197 SLC24A1O60721 1099 aa18.82■□□□□ 0.6
PTPN7-218ENST00000496197 BRINP3Q76B58 766 aa18.82■□□□□ 0.6
PTPN7-218ENST00000496197 MON2Q7Z3U7 1717 aa18.82■□□□□ 0.6
PTPN7-218ENST00000496197 ESCO1Q5FWF5 840 aa18.81■□□□□ 0.6
PTPN7-218ENST00000496197 PMFBP1Q8TBY8 1022 aa18.81■□□□□ 0.6
PTPN7-218ENST00000496197 PUS7Q96PZ0 661 aaKnown RBP18.81■□□□□ 0.6
PTPN7-218ENST00000496197 CABP1Q9NZU7 370 aa18.81■□□□□ 0.6
PTPN7-218ENST00000496197 CCDC61Q9Y6R9 512 aa18.81■□□□□ 0.6
PTPN7-218ENST00000496197 SLC12A5Q9H2X9 1139 aa18.8■□□□□ 0.6
PTPN7-218ENST00000496197 NRKQ7Z2Y5 1582 aa18.8■□□□□ 0.6
PTPN7-218ENST00000496197 TOM1O60784 492 aa18.79■□□□□ 0.6
PTPN7-218ENST00000496197 DDX17Q92841 729 aaKnown RBP18.79■□□□□ 0.6
PTPN7-218ENST00000496197 TRPM3Q9HCF6 1732 aaPredicted RBP18.78■□□□□ 0.6
PTPN7-218ENST00000496197 PIP4K2BP78356 416 aa18.78■□□□□ 0.6
PTPN7-218ENST00000496197 PHF8Q9UPP1 1060 aa18.78■□□□□ 0.6
PTPN7-218ENST00000496197 CDCA8Q53HL2 280 aa18.77■□□□□ 0.6
PTPN7-218ENST00000496197 TMC1Q8TDI8 760 aa18.77■□□□□ 0.6
PTPN7-218ENST00000496197 POLR3AO14802 1390 aaPredicted RBP18.77■□□□□ 0.6
PTPN7-218ENST00000496197 PLEKHG3A1L390 1219 aa18.77■□□□□ 0.59
PTPN7-218ENST00000496197 ZNF316A6NFI3 1004 aaPredicted RBP18.77■□□□□ 0.59
PTPN7-218ENST00000496197 ACEP12821 1306 aa18.77■□□□□ 0.59
PTPN7-218ENST00000496197 CPSF1Q10570 1443 aaKnown RBP18.76■□□□□ 0.59
PTPN7-218ENST00000496197 AHDC1Q5TGY3 1603 aaPredicted RBP18.76■□□□□ 0.59
PTPN7-218ENST00000496197 PHLPP1O60346 1717 aa18.76■□□□□ 0.59
PTPN7-218ENST00000496197 A0A1W2PP64 1363 aa18.76■□□□□ 0.59
PTPN7-218ENST00000496197 PXDNQ92626 1479 aa18.75■□□□□ 0.59
PTPN7-218ENST00000496197 FOXO3O43524 673 aa18.74■□□□□ 0.59
PTPN7-218ENST00000496197 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
PTPN7-218ENST00000496197 COL16A1Q07092 1604 aaPredicted RBP18.73■□□□□ 0.59
PTPN7-218ENST00000496197 NINLQ9Y2I6 1382 aa18.73■□□□□ 0.59
PTPN7-218ENST00000496197 XPCQ01831 940 aaPredicted RBP18.73■□□□□ 0.59
PTPN7-218ENST00000496197 ANKRD36BQ8N2N9 1353 aa18.72■□□□□ 0.59
PTPN7-218ENST00000496197 ALS2Q96Q42 1657 aa18.72■□□□□ 0.59
PTPN7-218ENST00000496197 USP6P35125 1406 aa18.72■□□□□ 0.59
PTPN7-218ENST00000496197 MARF1Q9Y4F3 1742 aaKnown RBP18.71■□□□□ 0.59
PTPN7-218ENST00000496197 NGDNQ8NEJ9 315 aaKnown RBP18.71■□□□□ 0.59
PTPN7-218ENST00000496197 SSH2Q76I76 1423 aa18.7■□□□□ 0.58
PTPN7-218ENST00000496197 PIK3C2AO00443 1686 aa18.7■□□□□ 0.58
PTPN7-218ENST00000496197 CARD14Q9BXL6 1004 aa18.7■□□□□ 0.58
PTPN7-218ENST00000496197 KTN1Q86UP2 1357 aaKnown RBP18.69■□□□□ 0.58
PTPN7-218ENST00000496197 KIF20BQ96Q89 1820 aa18.69■□□□□ 0.58
PTPN7-218ENST00000496197 NPHP3Q7Z494 1330 aa18.68■□□□□ 0.58
PTPN7-218ENST00000496197 PANK3Q9H999 370 aa18.68■□□□□ 0.58
PTPN7-218ENST00000496197 SOS2Q07890 1332 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms