RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CDCA8Q53HL2 280 aa14.13□□□□□ -0.15
HDAC3-214ENST00000495485 KIF7Q2M1P5 1343 aa14.13□□□□□ -0.15
HDAC3-214ENST00000495485 ASXL1Q8IXJ9 1541 aa14.12□□□□□ -0.15
HDAC3-214ENST00000495485 CFAP70Q5T0N1 1121 aa14.12□□□□□ -0.15
HDAC3-214ENST00000495485 C19orf44Q9H6X5 657 aa14.12□□□□□ -0.15
HDAC3-214ENST00000495485 TMF1P82094 1093 aa14.11□□□□□ -0.15
HDAC3-214ENST00000495485 FBXO41Q8TF61 875 aa14.11□□□□□ -0.15
HDAC3-214ENST00000495485 ADGRL3Q9HAR2 1447 aa14.1□□□□□ -0.15
HDAC3-214ENST00000495485 NBPF1Q3BBV0 1214 aa14.1□□□□□ -0.15
HDAC3-214ENST00000495485 CADPS2Q86UW7 1296 aa14.1□□□□□ -0.15
HDAC3-214ENST00000495485 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.08□□□□□ -0.16
HDAC3-214ENST00000495485 C14orf37Q86TY3 774 aa14.08□□□□□ -0.16
HDAC3-214ENST00000495485 C11orf95C9JLR9 678 aaPredicted RBP14.07□□□□□ -0.16
HDAC3-214ENST00000495485 POLR3GLQ9BT43 218 aa14.07□□□□□ -0.16
HDAC3-214ENST00000495485 ROBO2Q9HCK4 1378 aa14.07□□□□□ -0.16
HDAC3-214ENST00000495485 ARHGEF28Q8N1W1 1705 aaKnown RBP14.07□□□□□ -0.16
HDAC3-214ENST00000495485 CDC42BPGQ6DT37 1551 aa14.06□□□□□ -0.16
HDAC3-214ENST00000495485 ATF3P18847 181 aa14.06□□□□□ -0.16
HDAC3-214ENST00000495485 TMEM132EQ6IEE7 984 aa14.06□□□□□ -0.16
HDAC3-214ENST00000495485 SENP3Q9H4L4 574 aaPredicted RBP14.06□□□□□ -0.16
HDAC3-214ENST00000495485 NALCNQ8IZF0 1738 aa14.05□□□□□ -0.16
HDAC3-214ENST00000495485 UBAP1LF5GYI3 381 aa14.05□□□□□ -0.16
HDAC3-214ENST00000495485 ADGRB2O60241 1585 aa14.05□□□□□ -0.16
HDAC3-214ENST00000495485 YTHDC1Q96MU7 727 aaKnown RBP14.04□□□□□ -0.16
HDAC3-214ENST00000495485 POGKQ9P215 609 aa14.04□□□□□ -0.16
HDAC3-214ENST00000495485 STK26Q9P289 416 aa14.04□□□□□ -0.16
HDAC3-214ENST00000495485 KTN1Q86UP2 1357 aaKnown RBP14.03□□□□□ -0.16
HDAC3-214ENST00000495485 SBNO2Q9Y2G9 1366 aa14.01□□□□□ -0.17
HDAC3-214ENST00000495485 SLAIN2Q9P270 581 aa14.01□□□□□ -0.17
HDAC3-214ENST00000495485 TRAK1Q9UPV9 953 aa14.01□□□□□ -0.17
HDAC3-214ENST00000495485 PRAM1Q96QH2 718 aa14□□□□□ -0.17
HDAC3-214ENST00000495485 TESK2Q96S53 571 aa14□□□□□ -0.17
HDAC3-214ENST00000495485 CENPJQ9HC77 1338 aaPredicted RBP13.99□□□□□ -0.17
HDAC3-214ENST00000495485 PRKRIP1Q9H875 184 aaPredicted RBP13.99□□□□□ -0.17
HDAC3-214ENST00000495485 ANKARQ7Z5J8 1434 aa13.98□□□□□ -0.17
HDAC3-214ENST00000495485 FMN2Q9NZ56 1722 aa13.98□□□□□ -0.17
HDAC3-214ENST00000495485 WAPLQ7Z5K2 1190 aa13.98□□□□□ -0.17
HDAC3-214ENST00000495485 MST1RQ04912 1400 aa13.98□□□□□ -0.17
HDAC3-214ENST00000495485 RALBP1Q15311 655 aa13.97□□□□□ -0.17
HDAC3-214ENST00000495485 QRICH2Q9H0J4 1663 aa13.97□□□□□ -0.17
HDAC3-214ENST00000495485 ITSN1Q15811 1721 aa13.96□□□□□ -0.17
HDAC3-214ENST00000495485 ROBO1Q9Y6N7 1651 aa13.96□□□□□ -0.17
HDAC3-214ENST00000495485 PLEKHH1Q9ULM0 1364 aa13.96□□□□□ -0.18
HDAC3-214ENST00000495485 KIF1AQ12756 1690 aa13.95□□□□□ -0.18
HDAC3-214ENST00000495485 C1orf167Q5SNV9 1468 aa13.95□□□□□ -0.18
HDAC3-214ENST00000495485 WASLO00401 505 aaPredicted RBP13.94□□□□□ -0.18
HDAC3-214ENST00000495485 RBM33Q96EV2 1170 aaKnown RBP13.94□□□□□ -0.18
HDAC3-214ENST00000495485 PUS7Q96PZ0 661 aaKnown RBP13.94□□□□□ -0.18
HDAC3-214ENST00000495485 TULP4Q9NRJ4 1543 aa13.94□□□□□ -0.18
HDAC3-214ENST00000495485 AHDC1Q5TGY3 1603 aaPredicted RBP13.93□□□□□ -0.18
HDAC3-214ENST00000495485 DISP3Q9P2K9 1392 aa13.93□□□□□ -0.18
HDAC3-214ENST00000495485 EVC2Q86UK5 1308 aa13.92□□□□□ -0.18
HDAC3-214ENST00000495485 PIP4K2BP78356 416 aa13.92□□□□□ -0.18
HDAC3-214ENST00000495485 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
HDAC3-214ENST00000495485 NHSL1Q5SYE7 1610 aa13.91□□□□□ -0.18
HDAC3-214ENST00000495485 MINK1Q8N4C8 1332 aaPredicted RBP13.9□□□□□ -0.18
HDAC3-214ENST00000495485 SAFB2Q14151 953 aaKnown RBP eCLIP13.9□□□□□ -0.18
HDAC3-214ENST00000495485 BRINP3Q76B58 766 aa13.9□□□□□ -0.18
HDAC3-214ENST00000495485 MRS2Q9HD23 443 aa13.9□□□□□ -0.18
HDAC3-214ENST00000495485 KNSTRNQ9Y448 316 aa13.9□□□□□ -0.18
HDAC3-214ENST00000495485 NPHP3Q7Z494 1330 aa13.9□□□□□ -0.19
HDAC3-214ENST00000495485 PANK3Q9H999 370 aa13.89□□□□□ -0.19
HDAC3-214ENST00000495485 PHLPP1O60346 1717 aa13.89□□□□□ -0.19
HDAC3-214ENST00000495485 RGPD8O14715 1765 aaPredicted RBP13.88□□□□□ -0.19
HDAC3-214ENST00000495485 ATAD2Q6PL18 1390 aa13.88□□□□□ -0.19
HDAC3-214ENST00000495485 ILDR1Q86SU0 546 aaPredicted RBP13.88□□□□□ -0.19
HDAC3-214ENST00000495485 CCDC61Q9Y6R9 512 aa13.88□□□□□ -0.19
HDAC3-214ENST00000495485 MYBBP1AQ9BQG0 1328 aaKnown RBP13.88□□□□□ -0.19
HDAC3-214ENST00000495485 BRD4O60885 1362 aaPredicted RBP13.87□□□□□ -0.19
HDAC3-214ENST00000495485 CDK19Q9BWU1 502 aa13.87□□□□□ -0.19
HDAC3-214ENST00000495485 ATP7BP35670 1465 aa13.87□□□□□ -0.19
HDAC3-214ENST00000495485 USP32Q8NFA0 1604 aa13.86□□□□□ -0.19
HDAC3-214ENST00000495485 NINLQ9Y2I6 1382 aa13.86□□□□□ -0.19
HDAC3-214ENST00000495485 TOPAZ1Q8N9V7 1692 aa13.86□□□□□ -0.19
HDAC3-214ENST00000495485 ESCO1Q5FWF5 840 aa13.86□□□□□ -0.19
HDAC3-214ENST00000495485 TMC1Q8TDI8 760 aa13.86□□□□□ -0.19
HDAC3-214ENST00000495485 PHF8Q9UPP1 1060 aa13.86□□□□□ -0.19
HDAC3-214ENST00000495485 PER1O15534 1290 aaPredicted RBP13.85□□□□□ -0.19
HDAC3-214ENST00000495485 LRRC59Q96AG4 307 aaKnown RBP13.85□□□□□ -0.19
HDAC3-214ENST00000495485 COL16A1Q07092 1604 aaPredicted RBP13.84□□□□□ -0.19
HDAC3-214ENST00000495485 PLEKHG3A1L390 1219 aa13.84□□□□□ -0.19
HDAC3-214ENST00000495485 SRPK2P78362 688 aaKnown RBP13.84□□□□□ -0.19
HDAC3-214ENST00000495485 PSME1Q06323 249 aa13.84□□□□□ -0.19
HDAC3-214ENST00000495485 NUDT16Q96DE0 195 aaKnown RBP13.84□□□□□ -0.19
HDAC3-214ENST00000495485 SOS2Q07890 1332 aaPredicted RBP13.84□□□□□ -0.19
HDAC3-214ENST00000495485 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.19
HDAC3-214ENST00000495485 NLRP13Q86W25 1043 aa13.83□□□□□ -0.2
HDAC3-214ENST00000495485 JCADQ9P266 1359 aa13.83□□□□□ -0.2
HDAC3-214ENST00000495485 SHPRHQ149N8 1683 aa13.82□□□□□ -0.2
HDAC3-214ENST00000495485 HSPA1LP34931 641 aa13.82□□□□□ -0.2
HDAC3-214ENST00000495485 ORAI2Q96SN7 254 aa13.82□□□□□ -0.2
HDAC3-214ENST00000495485 SBNO1A3KN83 1393 aa13.82□□□□□ -0.2
HDAC3-214ENST00000495485 POLR3AO14802 1390 aaPredicted RBP13.82□□□□□ -0.2
HDAC3-214ENST00000495485 PARD3Q8TEW0 1356 aa13.82□□□□□ -0.2
HDAC3-214ENST00000495485 ZNF692Q9BU19 519 aaPredicted RBP13.81□□□□□ -0.2
HDAC3-214ENST00000495485 MYOM1P52179 1685 aa13.8□□□□□ -0.2
HDAC3-214ENST00000495485 FAM9BQ8IZU0 186 aa13.8□□□□□ -0.2
HDAC3-214ENST00000495485 SPATA31A6Q5VVP1 1343 aa13.8□□□□□ -0.2
HDAC3-214ENST00000495485 PRR36Q9H6K5 1346 aa13.8□□□□□ -0.2
HDAC3-214ENST00000495485 PPIP5K1Q6PFW1 1433 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms