RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 DLC1Q96QB1 1528 aa17.22■□□□□ 0.35
CSNK1E-213ENST00000495232 TRPM1Q7Z4N2 1603 aa17.22■□□□□ 0.35
CSNK1E-213ENST00000495232 NALCNQ8IZF0 1738 aa17.22■□□□□ 0.35
CSNK1E-213ENST00000495232 SAFB2Q14151 953 aaKnown RBP eCLIP17.22■□□□□ 0.35
CSNK1E-213ENST00000495232 NBPF8Q3BBV2 869 aa17.21■□□□□ 0.35
CSNK1E-213ENST00000495232 SLAIN2Q9P270 581 aa17.21■□□□□ 0.35
CSNK1E-213ENST00000495232 PLEKHH1Q9ULM0 1364 aa17.2■□□□□ 0.34
CSNK1E-213ENST00000495232 ARHGEF28Q8N1W1 1705 aaKnown RBP17.17■□□□□ 0.34
CSNK1E-213ENST00000495232 CARD11Q9BXL7 1154 aa17.17■□□□□ 0.34
CSNK1E-213ENST00000495232 RALGAPBQ86X10 1494 aa17.16■□□□□ 0.34
CSNK1E-213ENST00000495232 EIF3AQ14152 1382 aaKnown RBP17.15■□□□□ 0.34
CSNK1E-213ENST00000495232 MINK1Q8N4C8 1332 aaPredicted RBP17.15■□□□□ 0.34
CSNK1E-213ENST00000495232 CDC42BPGQ6DT37 1551 aa17.15■□□□□ 0.34
CSNK1E-213ENST00000495232 ROBO1Q9Y6N7 1651 aa17.14■□□□□ 0.33
CSNK1E-213ENST00000495232 MST1RQ04912 1400 aa17.13■□□□□ 0.33
CSNK1E-213ENST00000495232 HIRIP3Q9BW71 556 aaPredicted RBP17.13■□□□□ 0.33
CSNK1E-213ENST00000495232 CENPJQ9HC77 1338 aaPredicted RBP17.13■□□□□ 0.33
CSNK1E-213ENST00000495232 GPRASP1Q5JY77 1395 aa17.13■□□□□ 0.33
CSNK1E-213ENST00000495232 NUTM2FA1L443 756 aa17.12■□□□□ 0.33
CSNK1E-213ENST00000495232 C1orf167Q5SNV9 1468 aa17.11■□□□□ 0.33
CSNK1E-213ENST00000495232 BRINP3Q76B58 766 aa17.1■□□□□ 0.33
CSNK1E-213ENST00000495232 WASLO00401 505 aaPredicted RBP17.09■□□□□ 0.33
CSNK1E-213ENST00000495232 HSPA1LP34931 641 aa17.09■□□□□ 0.33
CSNK1E-213ENST00000495232 ESCO1Q5FWF5 840 aa17.09■□□□□ 0.33
CSNK1E-213ENST00000495232 ADGRB2O60241 1585 aa17.09■□□□□ 0.33
CSNK1E-213ENST00000495232 FMN2Q9NZ56 1722 aa17.08■□□□□ 0.32
CSNK1E-213ENST00000495232 QRICH2Q9H0J4 1663 aa17.08■□□□□ 0.32
CSNK1E-213ENST00000495232 ORAI2Q96SN7 254 aa17.06■□□□□ 0.32
CSNK1E-213ENST00000495232 CDK19Q9BWU1 502 aa17.05■□□□□ 0.32
CSNK1E-213ENST00000495232 PHLPP1O60346 1717 aa17.04■□□□□ 0.32
CSNK1E-213ENST00000495232 ANKARQ7Z5J8 1434 aa17.04■□□□□ 0.32
CSNK1E-213ENST00000495232 EVC2Q86UK5 1308 aa17.03■□□□□ 0.32
CSNK1E-213ENST00000495232 TULP4Q9NRJ4 1543 aa17.03■□□□□ 0.32
CSNK1E-213ENST00000495232 SRPK2P78362 688 aaKnown RBP17.03■□□□□ 0.32
CSNK1E-213ENST00000495232 RGPD8O14715 1765 aaPredicted RBP17.02■□□□□ 0.31
CSNK1E-213ENST00000495232 AHDC1Q5TGY3 1603 aaPredicted RBP17.01■□□□□ 0.31
CSNK1E-213ENST00000495232 SLC24A1O60721 1099 aa17.01■□□□□ 0.31
CSNK1E-213ENST00000495232 NUDT16Q96DE0 195 aaKnown RBP17.01■□□□□ 0.31
CSNK1E-213ENST00000495232 PHF8Q9UPP1 1060 aa17.01■□□□□ 0.31
CSNK1E-213ENST00000495232 USP47Q96K76 1375 aa17.01■□□□□ 0.31
CSNK1E-213ENST00000495232 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
CSNK1E-213ENST00000495232 NPHP3Q7Z494 1330 aa17■□□□□ 0.31
CSNK1E-213ENST00000495232 ST20-MTHFSA0A0A6YYL1 179 aa17■□□□□ 0.31
CSNK1E-213ENST00000495232 FOXO3O43524 673 aa17■□□□□ 0.31
CSNK1E-213ENST00000495232 NHSL1Q5SYE7 1610 aa16.99■□□□□ 0.31
CSNK1E-213ENST00000495232 DDX17Q92841 729 aaKnown RBP16.99■□□□□ 0.31
CSNK1E-213ENST00000495232 CABP2Q9NPB3 220 aa16.99■□□□□ 0.31
CSNK1E-213ENST00000495232 SBNO2Q9Y2G9 1366 aa16.99■□□□□ 0.31
CSNK1E-213ENST00000495232 ITSN1Q15811 1721 aa16.99■□□□□ 0.31
CSNK1E-213ENST00000495232 PMFBP1Q8TBY8 1022 aa16.98■□□□□ 0.31
CSNK1E-213ENST00000495232 LRRC59Q96AG4 307 aaKnown RBP16.98■□□□□ 0.31
CSNK1E-213ENST00000495232 CCDC61Q9Y6R9 512 aa16.98■□□□□ 0.31
CSNK1E-213ENST00000495232 USP32Q8NFA0 1604 aa16.98■□□□□ 0.31
CSNK1E-213ENST00000495232 PRR36Q9H6K5 1346 aa16.97■□□□□ 0.31
CSNK1E-213ENST00000495232 PSME1Q06323 249 aa16.97■□□□□ 0.31
CSNK1E-213ENST00000495232 NGDNQ8NEJ9 315 aaKnown RBP16.97■□□□□ 0.31
CSNK1E-213ENST00000495232 COL16A1Q07092 1604 aaPredicted RBP16.96■□□□□ 0.31
CSNK1E-213ENST00000495232 ATP7BP35670 1465 aa16.96■□□□□ 0.31
CSNK1E-213ENST00000495232 JCADQ9P266 1359 aa16.95■□□□□ 0.3
CSNK1E-213ENST00000495232 SOS2Q07890 1332 aaPredicted RBP16.95■□□□□ 0.3
CSNK1E-213ENST00000495232 EIF4G2P78344 907 aaKnown RBP eCLIP16.94■□□□□ 0.3
CSNK1E-213ENST00000495232 XPCQ01831 940 aaPredicted RBP16.94■□□□□ 0.3
CSNK1E-213ENST00000495232 KRT28Q7Z3Y7 464 aa16.94■□□□□ 0.3
CSNK1E-213ENST00000495232 TMF1P82094 1093 aa16.93■□□□□ 0.3
CSNK1E-213ENST00000495232 PPIP5K1Q6PFW1 1433 aa16.93■□□□□ 0.3
CSNK1E-213ENST00000495232 ATAD2Q6PL18 1390 aa16.92■□□□□ 0.3
CSNK1E-213ENST00000495232 TESK2Q96S53 571 aa16.91■□□□□ 0.3
CSNK1E-213ENST00000495232 PXDNQ92626 1479 aa16.91■□□□□ 0.3
CSNK1E-213ENST00000495232 TOPAZ1Q8N9V7 1692 aa16.91■□□□□ 0.3
CSNK1E-213ENST00000495232 PLEKHG3A1L390 1219 aa16.9■□□□□ 0.3
CSNK1E-213ENST00000495232 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
CSNK1E-213ENST00000495232 CABP1Q9NZU7 370 aa16.9■□□□□ 0.3
CSNK1E-213ENST00000495232 ACEP12821 1306 aa16.9■□□□□ 0.3
CSNK1E-213ENST00000495232 LMOD2Q6P5Q4 547 aa16.89■□□□□ 0.29
CSNK1E-213ENST00000495232 SHPRHQ149N8 1683 aa16.88■□□□□ 0.29
CSNK1E-213ENST00000495232 PAK3O75914 559 aaPredicted RBP16.88■□□□□ 0.29
CSNK1E-213ENST00000495232 HSPA5P11021 654 aaKnown RBP16.88■□□□□ 0.29
CSNK1E-213ENST00000495232 TMC1Q8TDI8 760 aa16.88■□□□□ 0.29
CSNK1E-213ENST00000495232 PUS7Q96PZ0 661 aaKnown RBP16.88■□□□□ 0.29
CSNK1E-213ENST00000495232 SPATA31A6Q5VVP1 1343 aa16.88■□□□□ 0.29
CSNK1E-213ENST00000495232 SBNO1A3KN83 1393 aa16.87■□□□□ 0.29
CSNK1E-213ENST00000495232 POLR3AO14802 1390 aaPredicted RBP16.87■□□□□ 0.29
CSNK1E-213ENST00000495232 SPATA31A3Q5VYP0 1347 aa16.86■□□□□ 0.29
CSNK1E-213ENST00000495232 PNPLA6Q8IY17 1366 aa16.86■□□□□ 0.29
CSNK1E-213ENST00000495232 NUTM2BA6NNL0 878 aaPredicted RBP16.85■□□□□ 0.29
CSNK1E-213ENST00000495232 NUTM2EB1AL46 878 aaPredicted RBP16.85■□□□□ 0.29
CSNK1E-213ENST00000495232 NUTM2AQ8IVF1 878 aaPredicted RBP16.85■□□□□ 0.29
CSNK1E-213ENST00000495232 ZNF692Q9BU19 519 aaPredicted RBP16.85■□□□□ 0.29
CSNK1E-213ENST00000495232 DISP3Q9P2K9 1392 aa16.85■□□□□ 0.29
CSNK1E-213ENST00000495232 TNS3Q68CZ2 1445 aa16.85■□□□□ 0.29
CSNK1E-213ENST00000495232 MEX3CQ5U5Q3 659 aaKnown RBP16.84■□□□□ 0.29
CSNK1E-213ENST00000495232 ARHGEF10O15013 1369 aa16.84■□□□□ 0.29
CSNK1E-213ENST00000495232 HAP1P54257 671 aaPredicted RBP16.83■□□□□ 0.28
CSNK1E-213ENST00000495232 HDGFL2Q7Z4V5 671 aaPredicted RBP16.83■□□□□ 0.28
CSNK1E-213ENST00000495232 NINLQ9Y2I6 1382 aa16.82■□□□□ 0.28
CSNK1E-213ENST00000495232 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
CSNK1E-213ENST00000495232 POLR3GLQ9BT43 218 aa16.82■□□□□ 0.28
CSNK1E-213ENST00000495232 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
CSNK1E-213ENST00000495232 TERF2IPQ9NYB0 399 aa16.82■□□□□ 0.28
CSNK1E-213ENST00000495232 MED1Q15648 1581 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms