RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 RGPD1P0DJD0 1748 aa23.22■■□□□ 1.31
CHMP2B-205ENST00000494980 PTPN23Q9H3S7 1636 aa23.22■■□□□ 1.31
CHMP2B-205ENST00000494980 EN1Q05925 392 aaPredicted RBP23.21■■□□□ 1.31
CHMP2B-205ENST00000494980 KRT27Q7Z3Y8 459 aa23.21■■□□□ 1.31
CHMP2B-205ENST00000494980 UTRNP46939 3433 aa23.21■■□□□ 1.31
CHMP2B-205ENST00000494980 METP08581 1390 aa23.19■■□□□ 1.3
CHMP2B-205ENST00000494980 DAPK1P53355 1430 aa23.17■■□□□ 1.3
CHMP2B-205ENST00000494980 PXDNQ92626 1479 aa23.16■■□□□ 1.3
CHMP2B-205ENST00000494980 ANKRD30AQ9BXX3 1397 aa23.14■■□□□ 1.3
CHMP2B-205ENST00000494980 TNS1Q9HBL0 1735 aaKnown RBP23.14■■□□□ 1.3
CHMP2B-205ENST00000494980 CAMTA1Q9Y6Y1 1673 aa23.14■■□□□ 1.29
CHMP2B-205ENST00000494980 USP32Q8NFA0 1604 aa23.14■■□□□ 1.29
CHMP2B-205ENST00000494980 DCAF8L1A6NGE4 600 aa23.13■■□□□ 1.29
CHMP2B-205ENST00000494980 IQGAP3Q86VI3 1631 aa23.12■■□□□ 1.29
CHMP2B-205ENST00000494980 E9PCH4 1651 aa23.12■■□□□ 1.29
CHMP2B-205ENST00000494980 PLCH1Q4KWH8 1693 aa23.12■■□□□ 1.29
CHMP2B-205ENST00000494980 ZNF784Q8NCA9 323 aaPredicted RBP23.11■■□□□ 1.29
CHMP2B-205ENST00000494980 CHIC2Q9UKJ5 165 aa23.11■■□□□ 1.29
CHMP2B-205ENST00000494980 NPHP3Q7Z494 1330 aa23.1■■□□□ 1.29
CHMP2B-205ENST00000494980 XPCQ01831 940 aaPredicted RBP23.1■■□□□ 1.29
CHMP2B-205ENST00000494980 NWD2Q9ULI1 1742 aa23.09■■□□□ 1.29
CHMP2B-205ENST00000494980 ONECUT3O60422 494 aaPredicted RBP23.09■■□□□ 1.29
CHMP2B-205ENST00000494980 VPS72Q15906 364 aa23.09■■□□□ 1.29
CHMP2B-205ENST00000494980 CCDC9Q9Y3X0 531 aaKnown RBP23.09■■□□□ 1.29
CHMP2B-205ENST00000494980 DISP2A7MBM2 1401 aa23.08■■□□□ 1.29
CHMP2B-205ENST00000494980 A0A0G2JS52 829 aa23.08■■□□□ 1.29
CHMP2B-205ENST00000494980 MYT1Q01538 1121 aa23.08■■□□□ 1.29
CHMP2B-205ENST00000494980 ADGRL2O95490 1459 aa23.07■■□□□ 1.28
CHMP2B-205ENST00000494980 C1QTNF8P60827 252 aa23.05■■□□□ 1.28
CHMP2B-205ENST00000494980 EZH2Q15910 746 aaKnown RBP23.05■■□□□ 1.28
CHMP2B-205ENST00000494980 PPP1R1BQ9UD71 204 aaPredicted RBP23.05■■□□□ 1.28
CHMP2B-205ENST00000494980 NINLQ9Y2I6 1382 aa23.04■■□□□ 1.28
CHMP2B-205ENST00000494980 ADGRB2O60241 1585 aa23.02■■□□□ 1.28
CHMP2B-205ENST00000494980 ESCO1Q5FWF5 840 aa23.02■■□□□ 1.28
CHMP2B-205ENST00000494980 FOXO3O43524 673 aa23.01■■□□□ 1.27
CHMP2B-205ENST00000494980 KANK4Q5T7N3 995 aaPredicted RBP23.01■■□□□ 1.27
CHMP2B-205ENST00000494980 ROBO2Q9HCK4 1378 aa23.01■■□□□ 1.27
CHMP2B-205ENST00000494980 FAM182BQ5T319 152 aa23■■□□□ 1.27
CHMP2B-205ENST00000494980 RREB1Q92766 1687 aa22.98■■□□□ 1.27
CHMP2B-205ENST00000494980 ANKRD50Q9ULJ7 1429 aa22.98■■□□□ 1.27
CHMP2B-205ENST00000494980 NUP188Q5SRE5 1749 aa22.97■■□□□ 1.27
CHMP2B-205ENST00000494980 FAM98CQ17RN3 349 aaKnown RBP22.97■■□□□ 1.27
CHMP2B-205ENST00000494980 CDC42BPGQ6DT37 1551 aa22.96■■□□□ 1.27
CHMP2B-205ENST00000494980 CHD4Q14839 1912 aa22.96■■□□□ 1.27
CHMP2B-205ENST00000494980 CAMKK2Q96RR4 588 aa22.95■■□□□ 1.26
CHMP2B-205ENST00000494980 ABCA3Q99758 1704 aa22.95■■□□□ 1.26
CHMP2B-205ENST00000494980 NRAPQ86VF7 1730 aa22.94■■□□□ 1.26
CHMP2B-205ENST00000494980 LRPPRCP42704 1394 aaKnown RBP22.94■■□□□ 1.26
CHMP2B-205ENST00000494980 SPON1Q9HCB6 807 aa22.94■■□□□ 1.26
CHMP2B-205ENST00000494980 HAP1P54257 671 aaPredicted RBP22.93■■□□□ 1.26
CHMP2B-205ENST00000494980 ZNF326Q5BKZ1 582 aaKnown RBP22.93■■□□□ 1.26
CHMP2B-205ENST00000494980 SPATA31A3Q5VYP0 1347 aa22.92■■□□□ 1.26
CHMP2B-205ENST00000494980 PARD3Q8TEW0 1356 aa22.9■■□□□ 1.26
CHMP2B-205ENST00000494980 NEXMIFQ5QGS0 1516 aa22.9■■□□□ 1.26
CHMP2B-205ENST00000494980 HFM1A2PYH4 1435 aa22.89■■□□□ 1.25
CHMP2B-205ENST00000494980 KCNQ2O43526 872 aa22.88■■□□□ 1.25
CHMP2B-205ENST00000494980 PLEKHG5O94827 1062 aa22.88■■□□□ 1.25
CHMP2B-205ENST00000494980 PRAG1Q86YV5 1406 aa22.88■■□□□ 1.25
CHMP2B-205ENST00000494980 THSD7AQ9UPZ6 1657 aa22.87■■□□□ 1.25
CHMP2B-205ENST00000494980 CABLES1Q8TDN4 633 aa22.87■■□□□ 1.25
CHMP2B-205ENST00000494980 TRIM37O94972 964 aa22.86■■□□□ 1.25
CHMP2B-205ENST00000494980 CCDC144AA2RUR9 1427 aa22.85■■□□□ 1.25
CHMP2B-205ENST00000494980 KIF1AQ12756 1690 aa22.85■■□□□ 1.25
CHMP2B-205ENST00000494980 VPS8Q8N3P4 1428 aa22.84■■□□□ 1.25
CHMP2B-205ENST00000494980 NRKQ7Z2Y5 1582 aa22.84■■□□□ 1.25
CHMP2B-205ENST00000494980 NUTM2FA1L443 756 aa22.83■■□□□ 1.25
CHMP2B-205ENST00000494980 APBA3O96018 575 aa22.83■■□□□ 1.25
CHMP2B-205ENST00000494980 NBPF8Q3BBV2 869 aa22.83■■□□□ 1.25
CHMP2B-205ENST00000494980 NBPF14Q5TI25 921 aa22.83■■□□□ 1.25
CHMP2B-205ENST00000494980 TNS3Q68CZ2 1445 aa22.82■■□□□ 1.24
CHMP2B-205ENST00000494980 FAM83GA6ND36 823 aa22.8■■□□□ 1.24
CHMP2B-205ENST00000494980 MYOM1P52179 1685 aa22.79■■□□□ 1.24
CHMP2B-205ENST00000494980 NAIPQ13075 1403 aa22.79■■□□□ 1.24
CHMP2B-205ENST00000494980 KRT28Q7Z3Y7 464 aa22.77■■□□□ 1.24
CHMP2B-205ENST00000494980 BTG4Q9NY30 223 aa22.76■■□□□ 1.23
CHMP2B-205ENST00000494980 FMN2Q9NZ56 1722 aa22.76■■□□□ 1.23
CHMP2B-205ENST00000494980 GIGYF1O75420 1035 aaPredicted RBP22.75■■□□□ 1.23
CHMP2B-205ENST00000494980 FAM196AQ6ZSG2 479 aa22.75■■□□□ 1.23
CHMP2B-205ENST00000494980 COL14A1Q05707 1796 aaKnown RBP22.75■■□□□ 1.23
CHMP2B-205ENST00000494980 CASZ1Q86V15 1759 aa22.75■■□□□ 1.23
CHMP2B-205ENST00000494980 SPATA31A5Q5VU36 1347 aa22.74■■□□□ 1.23
CHMP2B-205ENST00000494980 SPATA31A7Q8IWB4 1347 aa22.74■■□□□ 1.23
CHMP2B-205ENST00000494980 CLTCL1P53675 1640 aa22.74■■□□□ 1.23
CHMP2B-205ENST00000494980 RGPD8O14715 1765 aaPredicted RBP22.72■■□□□ 1.23
CHMP2B-205ENST00000494980 KIF1BO60333 1816 aa22.72■■□□□ 1.23
CHMP2B-205ENST00000494980 LMOD2Q6P5Q4 547 aa22.71■■□□□ 1.23
CHMP2B-205ENST00000494980 GOLGB1Q14789 3259 aaKnown RBP22.7■■□□□ 1.22
CHMP2B-205ENST00000494980 ARHGEF10O15013 1369 aa22.68■■□□□ 1.22
CHMP2B-205ENST00000494980 NUP155O75694 1391 aa22.68■■□□□ 1.22
CHMP2B-205ENST00000494980 RRBP1Q9P2E9 1410 aaKnown RBP22.65■■□□□ 1.22
CHMP2B-205ENST00000494980 SBNO1A3KN83 1393 aa22.65■■□□□ 1.22
CHMP2B-205ENST00000494980 PSME1Q06323 249 aa22.65■■□□□ 1.22
CHMP2B-205ENST00000494980 IFT172Q9UG01 1749 aa22.63■■□□□ 1.21
CHMP2B-205ENST00000494980 VGFO15240 615 aaPredicted RBP22.61■■□□□ 1.21
CHMP2B-205ENST00000494980 ZBTB7AO95365 584 aa22.61■■□□□ 1.21
CHMP2B-205ENST00000494980 FAM50AQ14320 339 aaKnown RBP22.61■■□□□ 1.21
CHMP2B-205ENST00000494980 WAPLQ7Z5K2 1190 aa22.61■■□□□ 1.21
CHMP2B-205ENST00000494980 FHDC1Q9C0D6 1143 aaPredicted RBP22.61■■□□□ 1.21
CHMP2B-205ENST00000494980 PTGER2P43116 358 aa22.6■■□□□ 1.21
CHMP2B-205ENST00000494980 SYT17Q9BSW7 474 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms