RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 CDC42BPGQ6DT37 1551 aa24.71■■□□□ 1.55
SNX17-209ENST00000494893 PRAM1Q96QH2 718 aa24.7■■□□□ 1.54
SNX17-209ENST00000494893 NBPF8Q3BBV2 869 aa24.68■■□□□ 1.54
SNX17-209ENST00000494893 BRINP3Q76B58 766 aa24.68■■□□□ 1.54
SNX17-209ENST00000494893 C1orf167Q5SNV9 1468 aa24.68■■□□□ 1.54
SNX17-209ENST00000494893 SAFB2Q14151 953 aaKnown RBP eCLIP24.66■■□□□ 1.54
SNX17-209ENST00000494893 TRPM1Q7Z4N2 1603 aa24.65■■□□□ 1.54
SNX17-209ENST00000494893 ARHGEF28Q8N1W1 1705 aaKnown RBP24.65■■□□□ 1.54
SNX17-209ENST00000494893 TONSLQ96HA7 1378 aa24.65■■□□□ 1.54
SNX17-209ENST00000494893 AHDC1Q5TGY3 1603 aaPredicted RBP24.62■■□□□ 1.53
SNX17-209ENST00000494893 POGKQ9P215 609 aa24.62■■□□□ 1.53
SNX17-209ENST00000494893 FMN2Q9NZ56 1722 aa24.61■■□□□ 1.53
SNX17-209ENST00000494893 ADGRB2O60241 1585 aa24.6■■□□□ 1.53
SNX17-209ENST00000494893 ORAI2Q96SN7 254 aa24.6■■□□□ 1.53
SNX17-209ENST00000494893 COL16A1Q07092 1604 aaPredicted RBP24.6■■□□□ 1.53
SNX17-209ENST00000494893 CLSPNQ9HAW4 1339 aa24.59■■□□□ 1.53
SNX17-209ENST00000494893 PHLPP1O60346 1717 aa24.58■■□□□ 1.53
SNX17-209ENST00000494893 NUTM2FA1L443 756 aa24.57■■□□□ 1.52
SNX17-209ENST00000494893 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
SNX17-209ENST00000494893 MINK1Q8N4C8 1332 aaPredicted RBP24.57■■□□□ 1.52
SNX17-209ENST00000494893 NHSL1Q5SYE7 1610 aa24.57■■□□□ 1.52
SNX17-209ENST00000494893 HIRIP3Q9BW71 556 aaPredicted RBP24.56■■□□□ 1.52
SNX17-209ENST00000494893 GPRASP1Q5JY77 1395 aa24.55■■□□□ 1.52
SNX17-209ENST00000494893 ROCK2O75116 1388 aaKnown RBP24.54■■□□□ 1.52
SNX17-209ENST00000494893 USP32Q8NFA0 1604 aa24.53■■□□□ 1.52
SNX17-209ENST00000494893 RALGAPBQ86X10 1494 aa24.52■■□□□ 1.52
SNX17-209ENST00000494893 CCER1Q8TC90 406 aaPredicted RBP24.51■■□□□ 1.51
SNX17-209ENST00000494893 ESCO1Q5FWF5 840 aa24.5■■□□□ 1.51
SNX17-209ENST00000494893 WASLO00401 505 aaPredicted RBP24.49■■□□□ 1.51
SNX17-209ENST00000494893 PRR36Q9H6K5 1346 aa24.49■■□□□ 1.51
SNX17-209ENST00000494893 MED1Q15648 1581 aaPredicted RBP24.47■■□□□ 1.51
SNX17-209ENST00000494893 ANKARQ7Z5J8 1434 aa24.47■■□□□ 1.51
SNX17-209ENST00000494893 CENPJQ9HC77 1338 aaPredicted RBP24.47■■□□□ 1.51
SNX17-209ENST00000494893 RGPD8O14715 1765 aaPredicted RBP24.47■■□□□ 1.51
SNX17-209ENST00000494893 TULP4Q9NRJ4 1543 aa24.46■■□□□ 1.51
SNX17-209ENST00000494893 JCADQ9P266 1359 aa24.46■■□□□ 1.51
SNX17-209ENST00000494893 SOS2Q07890 1332 aaPredicted RBP24.46■■□□□ 1.51
SNX17-209ENST00000494893 PXDNQ92626 1479 aa24.44■■□□□ 1.5
SNX17-209ENST00000494893 QRICH2Q9H0J4 1663 aa24.43■■□□□ 1.5
SNX17-209ENST00000494893 TIMELESSQ9UNS1 1208 aa24.43■■□□□ 1.5
SNX17-209ENST00000494893 ATP7BP35670 1465 aa24.43■■□□□ 1.5
SNX17-209ENST00000494893 FOXO3O43524 673 aa24.42■■□□□ 1.5
SNX17-209ENST00000494893 CARD11Q9BXL7 1154 aa24.42■■□□□ 1.5
SNX17-209ENST00000494893 KIF1AQ12756 1690 aa24.42■■□□□ 1.5
SNX17-209ENST00000494893 SHPRHQ149N8 1683 aa24.41■■□□□ 1.5
SNX17-209ENST00000494893 CDK19Q9BWU1 502 aa24.41■■□□□ 1.5
SNX17-209ENST00000494893 PHF8Q9UPP1 1060 aa24.41■■□□□ 1.5
SNX17-209ENST00000494893 NPHP3Q7Z494 1330 aa24.4■■□□□ 1.5
SNX17-209ENST00000494893 XPCQ01831 940 aaPredicted RBP24.4■■□□□ 1.5
SNX17-209ENST00000494893 EIF3AQ14152 1382 aaKnown RBP24.4■■□□□ 1.5
SNX17-209ENST00000494893 LRRC59Q96AG4 307 aaKnown RBP24.38■■□□□ 1.49
SNX17-209ENST00000494893 LRP6O75581 1613 aa24.38■■□□□ 1.49
SNX17-209ENST00000494893 PNPLA6Q8IY17 1366 aa24.38■■□□□ 1.49
SNX17-209ENST00000494893 PMFBP1Q8TBY8 1022 aa24.37■■□□□ 1.49
SNX17-209ENST00000494893 NUDT16Q96DE0 195 aaKnown RBP24.37■■□□□ 1.49
SNX17-209ENST00000494893 DISP3Q9P2K9 1392 aa24.37■■□□□ 1.49
SNX17-209ENST00000494893 TOPAZ1Q8N9V7 1692 aa24.34■■□□□ 1.49
SNX17-209ENST00000494893 SPATA31A6Q5VVP1 1343 aa24.34■■□□□ 1.49
SNX17-209ENST00000494893 KRT28Q7Z3Y7 464 aa24.32■■□□□ 1.48
SNX17-209ENST00000494893 CABP2Q9NPB3 220 aa24.32■■□□□ 1.48
SNX17-209ENST00000494893 SBNO2Q9Y2G9 1366 aa24.31■■□□□ 1.48
SNX17-209ENST00000494893 SRPK2P78362 688 aaKnown RBP24.29■■□□□ 1.48
SNX17-209ENST00000494893 ITSN1Q15811 1721 aa24.29■■□□□ 1.48
SNX17-209ENST00000494893 SPATA31A3Q5VYP0 1347 aa24.29■■□□□ 1.48
SNX17-209ENST00000494893 COL22A1Q8NFW1 1626 aaPredicted RBP24.28■■□□□ 1.48
SNX17-209ENST00000494893 CCDC61Q9Y6R9 512 aa24.28■■□□□ 1.48
SNX17-209ENST00000494893 TRPM3Q9HCF6 1732 aaPredicted RBP24.27■■□□□ 1.48
SNX17-209ENST00000494893 EVC2Q86UK5 1308 aa24.27■■□□□ 1.48
SNX17-209ENST00000494893 PLEKHG3A1L390 1219 aa24.26■■□□□ 1.47
SNX17-209ENST00000494893 NUTM2BA6NNL0 878 aaPredicted RBP24.26■■□□□ 1.47
SNX17-209ENST00000494893 NUTM2EB1AL46 878 aaPredicted RBP24.26■■□□□ 1.47
SNX17-209ENST00000494893 NUTM2AQ8IVF1 878 aaPredicted RBP24.26■■□□□ 1.47
SNX17-209ENST00000494893 TESK2Q96S53 571 aa24.26■■□□□ 1.47
SNX17-209ENST00000494893 RGS17Q9UGC6 210 aaPredicted RBP24.26■■□□□ 1.47
SNX17-209ENST00000494893 SBNO1A3KN83 1393 aa24.26■■□□□ 1.47
SNX17-209ENST00000494893 POLR3AO14802 1390 aaPredicted RBP24.26■■□□□ 1.47
SNX17-209ENST00000494893 TNS3Q68CZ2 1445 aa24.26■■□□□ 1.47
SNX17-209ENST00000494893 ST20-MTHFSA0A0A6YYL1 179 aa24.25■■□□□ 1.47
SNX17-209ENST00000494893 PSME1Q06323 249 aa24.25■■□□□ 1.47
SNX17-209ENST00000494893 PPIP5K1Q6PFW1 1433 aa24.25■■□□□ 1.47
SNX17-209ENST00000494893 NGDNQ8NEJ9 315 aaKnown RBP24.24■■□□□ 1.47
SNX17-209ENST00000494893 ACEP12821 1306 aa24.24■■□□□ 1.47
SNX17-209ENST00000494893 USP47Q96K76 1375 aa24.24■■□□□ 1.47
SNX17-209ENST00000494893 CABP1Q9NZU7 370 aa24.2■■□□□ 1.46
SNX17-209ENST00000494893 ALS2Q96Q42 1657 aa24.2■■□□□ 1.46
SNX17-209ENST00000494893 ILDR2Q71H61 639 aa24.19■■□□□ 1.46
SNX17-209ENST00000494893 PHF23Q9BUL5 403 aaPredicted RBP24.19■■□□□ 1.46
SNX17-209ENST00000494893 ATAD2Q6PL18 1390 aa24.16■■□□□ 1.46
SNX17-209ENST00000494893 ADAMTS2O95450 1211 aa24.15■■□□□ 1.46
SNX17-209ENST00000494893 MEX3CQ5U5Q3 659 aaKnown RBP24.15■■□□□ 1.46
SNX17-209ENST00000494893 ARHGEF10O15013 1369 aa24.15■■□□□ 1.46
SNX17-209ENST00000494893 CABLES1Q8TDN4 633 aa24.14■■□□□ 1.45
SNX17-209ENST00000494893 ZEB1P37275 1124 aaPredicted RBP24.13■■□□□ 1.45
SNX17-209ENST00000494893 LMOD2Q6P5Q4 547 aa24.13■■□□□ 1.45
SNX17-209ENST00000494893 POTEAQ6S8J7 498 aa24.13■■□□□ 1.45
SNX17-209ENST00000494893 ABCA3Q99758 1704 aa24.13■■□□□ 1.45
SNX17-209ENST00000494893 USP6P35125 1406 aa24.11■■□□□ 1.45
SNX17-209ENST00000494893 SSH2Q76I76 1423 aa24.11■■□□□ 1.45
SNX17-209ENST00000494893 PAK3O75914 559 aaPredicted RBP24.11■■□□□ 1.45
SNX17-209ENST00000494893 CPSF1Q10570 1443 aaKnown RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms