RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 ILDR2Q71H61 639 aa21.38■■□□□ 1.01
ATG4B-224ENST00000494132 DDX17Q92841 729 aaKnown RBP21.38■■□□□ 1.01
ATG4B-224ENST00000494132 SIN3AQ96ST3 1273 aa21.38■■□□□ 1.01
ATG4B-224ENST00000494132 SAFB2Q14151 953 aaKnown RBP eCLIP21.37■■□□□ 1.01
ATG4B-224ENST00000494132 FMN2Q9NZ56 1722 aa21.37■■□□□ 1.01
ATG4B-224ENST00000494132 NUTM2FA1L443 756 aa21.36■■□□□ 1.01
ATG4B-224ENST00000494132 ORAI2Q96SN7 254 aa21.35■■□□□ 1.01
ATG4B-224ENST00000494132 ARHGEF28Q8N1W1 1705 aaKnown RBP21.34■■□□□ 1.01
ATG4B-224ENST00000494132 SHPRHQ149N8 1683 aa21.34■■□□□ 1.01
ATG4B-224ENST00000494132 NEUROD1Q13562 356 aa21.33■■□□□ 1.01
ATG4B-224ENST00000494132 PRAM1Q96QH2 718 aa21.33■■□□□ 1.01
ATG4B-224ENST00000494132 PHF23Q9BUL5 403 aaPredicted RBP21.33■■□□□ 1.01
ATG4B-224ENST00000494132 TRAK1Q9UPV9 953 aa21.33■■□□□ 1.01
ATG4B-224ENST00000494132 JCADQ9P266 1359 aa21.33■■□□□ 1
ATG4B-224ENST00000494132 DLC1Q96QB1 1528 aa21.32■■□□□ 1
ATG4B-224ENST00000494132 KIAA1210Q9ULL0 1709 aa21.32■■□□□ 1
ATG4B-224ENST00000494132 STAC3Q96MF2 364 aa21.29■■□□□ 1
ATG4B-224ENST00000494132 POGKQ9P215 609 aa21.29■■□□□ 1
ATG4B-224ENST00000494132 ESCO1Q5FWF5 840 aa21.28■■□□□ 1
ATG4B-224ENST00000494132 L3MBTL2Q969R5 705 aa21.28■■□□□ 1
ATG4B-224ENST00000494132 SIRT1Q96EB6 747 aa21.28■■□□□ 1
ATG4B-224ENST00000494132 LRP6O75581 1613 aa21.27■■□□□ 1
ATG4B-224ENST00000494132 HIRIP3Q9BW71 556 aaPredicted RBP21.25■□□□□ 0.99
ATG4B-224ENST00000494132 MINK1Q8N4C8 1332 aaPredicted RBP21.25■□□□□ 0.99
ATG4B-224ENST00000494132 ADGRB2O60241 1585 aa21.24■□□□□ 0.99
ATG4B-224ENST00000494132 NBPF1Q3BBV0 1214 aa21.24■□□□□ 0.99
ATG4B-224ENST00000494132 USP32Q8NFA0 1604 aa21.24■□□□□ 0.99
ATG4B-224ENST00000494132 XPCQ01831 940 aaPredicted RBP21.23■□□□□ 0.99
ATG4B-224ENST00000494132 TRPM1Q7Z4N2 1603 aa21.22■□□□□ 0.99
ATG4B-224ENST00000494132 KIF1AQ12756 1690 aa21.22■□□□□ 0.99
ATG4B-224ENST00000494132 NUTM2BA6NNL0 878 aaPredicted RBP21.22■□□□□ 0.99
ATG4B-224ENST00000494132 NUTM2EB1AL46 878 aaPredicted RBP21.22■□□□□ 0.99
ATG4B-224ENST00000494132 NUTM2AQ8IVF1 878 aaPredicted RBP21.22■□□□□ 0.99
ATG4B-224ENST00000494132 RGS17Q9UGC6 210 aaPredicted RBP21.21■□□□□ 0.99
ATG4B-224ENST00000494132 FOXO3O43524 673 aa21.2■□□□□ 0.98
ATG4B-224ENST00000494132 LRRC59Q96AG4 307 aaKnown RBP21.2■□□□□ 0.98
ATG4B-224ENST00000494132 SPATA31A6Q5VVP1 1343 aa21.2■□□□□ 0.98
ATG4B-224ENST00000494132 PNPLA6Q8IY17 1366 aa21.2■□□□□ 0.98
ATG4B-224ENST00000494132 SOS2Q07890 1332 aaPredicted RBP21.19■□□□□ 0.98
ATG4B-224ENST00000494132 PXDNQ92626 1479 aa21.19■□□□□ 0.98
ATG4B-224ENST00000494132 MEX3CQ5U5Q3 659 aaKnown RBP21.18■□□□□ 0.98
ATG4B-224ENST00000494132 NPHP3Q7Z494 1330 aa21.17■□□□□ 0.98
ATG4B-224ENST00000494132 QRICH2Q9H0J4 1663 aa21.15■□□□□ 0.98
ATG4B-224ENST00000494132 SOCS7O14512 581 aa21.14■□□□□ 0.97
ATG4B-224ENST00000494132 PCGF6Q9BYE7 350 aa21.14■□□□□ 0.97
ATG4B-224ENST00000494132 TULP4Q9NRJ4 1543 aa21.14■□□□□ 0.97
ATG4B-224ENST00000494132 PRR36Q9H6K5 1346 aa21.13■□□□□ 0.97
ATG4B-224ENST00000494132 PMFBP1Q8TBY8 1022 aa21.13■□□□□ 0.97
ATG4B-224ENST00000494132 PHF8Q9UPP1 1060 aa21.13■□□□□ 0.97
ATG4B-224ENST00000494132 ANKARQ7Z5J8 1434 aa21.12■□□□□ 0.97
ATG4B-224ENST00000494132 ITSN1Q15811 1721 aa21.12■□□□□ 0.97
ATG4B-224ENST00000494132 COL22A1Q8NFW1 1626 aaPredicted RBP21.12■□□□□ 0.97
ATG4B-224ENST00000494132 WASLO00401 505 aaPredicted RBP21.12■□□□□ 0.97
ATG4B-224ENST00000494132 POTEAQ6S8J7 498 aa21.12■□□□□ 0.97
ATG4B-224ENST00000494132 TONSLQ96HA7 1378 aa21.11■□□□□ 0.97
ATG4B-224ENST00000494132 NBPF8Q3BBV2 869 aa21.11■□□□□ 0.97
ATG4B-224ENST00000494132 KRT28Q7Z3Y7 464 aa21.09■□□□□ 0.97
ATG4B-224ENST00000494132 MARF1Q9Y4F3 1742 aaKnown RBP21.09■□□□□ 0.97
ATG4B-224ENST00000494132 ROCK2O75116 1388 aaKnown RBP21.09■□□□□ 0.97
ATG4B-224ENST00000494132 ATP7BP35670 1465 aa21.08■□□□□ 0.97
ATG4B-224ENST00000494132 ADAMTS2O95450 1211 aa21.08■□□□□ 0.97
ATG4B-224ENST00000494132 PLEKHG5O94827 1062 aa21.07■□□□□ 0.96
ATG4B-224ENST00000494132 TOPAZ1Q8N9V7 1692 aa21.07■□□□□ 0.96
ATG4B-224ENST00000494132 EIF3AQ14152 1382 aaKnown RBP21.07■□□□□ 0.96
ATG4B-224ENST00000494132 TRPM3Q9HCF6 1732 aaPredicted RBP21.07■□□□□ 0.96
ATG4B-224ENST00000494132 CENPJQ9HC77 1338 aaPredicted RBP21.06■□□□□ 0.96
ATG4B-224ENST00000494132 C8orf37Q96NL8 207 aa21.06■□□□□ 0.96
ATG4B-224ENST00000494132 CDK19Q9BWU1 502 aa21.06■□□□□ 0.96
ATG4B-224ENST00000494132 PSME1Q06323 249 aa21.04■□□□□ 0.96
ATG4B-224ENST00000494132 NUDT16Q96DE0 195 aaKnown RBP21.04■□□□□ 0.96
ATG4B-224ENST00000494132 ABCA3Q99758 1704 aa21.04■□□□□ 0.96
ATG4B-224ENST00000494132 AFF2P51816 1311 aa21.04■□□□□ 0.96
ATG4B-224ENST00000494132 SPATA31A3Q5VYP0 1347 aa21.04■□□□□ 0.96
ATG4B-224ENST00000494132 TNS3Q68CZ2 1445 aa21.03■□□□□ 0.96
ATG4B-224ENST00000494132 LMOD2Q6P5Q4 547 aa21.02■□□□□ 0.96
ATG4B-224ENST00000494132 ALS2Q96Q42 1657 aa21.01■□□□□ 0.95
ATG4B-224ENST00000494132 NGDNQ8NEJ9 315 aaKnown RBP21■□□□□ 0.95
ATG4B-224ENST00000494132 RALGAPBQ86X10 1494 aa21■□□□□ 0.95
ATG4B-224ENST00000494132 SRPK2P78362 688 aaKnown RBP20.99■□□□□ 0.95
ATG4B-224ENST00000494132 ZNF772Q68DY9 489 aaPredicted RBP20.99■□□□□ 0.95
ATG4B-224ENST00000494132 NGLY1Q96IV0 654 aa20.99■□□□□ 0.95
ATG4B-224ENST00000494132 CABP2Q9NPB3 220 aa20.99■□□□□ 0.95
ATG4B-224ENST00000494132 CABLES1Q8TDN4 633 aa20.98■□□□□ 0.95
ATG4B-224ENST00000494132 SBNO1A3KN83 1393 aa20.97■□□□□ 0.95
ATG4B-224ENST00000494132 GPRASP1Q5JY77 1395 aa20.97■□□□□ 0.95
ATG4B-224ENST00000494132 CARD11Q9BXL7 1154 aa20.97■□□□□ 0.95
ATG4B-224ENST00000494132 PAK3O75914 559 aaPredicted RBP20.94■□□□□ 0.94
ATG4B-224ENST00000494132 HAP1P54257 671 aaPredicted RBP20.94■□□□□ 0.94
ATG4B-224ENST00000494132 CRYBG1Q9Y4K1 1723 aa20.94■□□□□ 0.94
ATG4B-224ENST00000494132 PPIP5K1Q6PFW1 1433 aa20.94■□□□□ 0.94
ATG4B-224ENST00000494132 CCDC61Q9Y6R9 512 aa20.93■□□□□ 0.94
ATG4B-224ENST00000494132 ACEP12821 1306 aa20.93■□□□□ 0.94
ATG4B-224ENST00000494132 PLCH1Q4KWH8 1693 aa20.93■□□□□ 0.94
ATG4B-224ENST00000494132 ARHGEF10O15013 1369 aa20.92■□□□□ 0.94
ATG4B-224ENST00000494132 USP21Q9UK80 565 aa20.91■□□□□ 0.94
ATG4B-224ENST00000494132 POLR3AO14802 1390 aaPredicted RBP20.9■□□□□ 0.94
ATG4B-224ENST00000494132 EVC2Q86UK5 1308 aa20.9■□□□□ 0.94
ATG4B-224ENST00000494132 QTRT2Q9H974 415 aaKnown RBP20.9■□□□□ 0.94
ATG4B-224ENST00000494132 RXRBP28702 533 aa20.89■□□□□ 0.93
ATG4B-224ENST00000494132 PHRF1Q9P1Y6 1649 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms