RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 DHX37Q8IY37 1157 aaKnown RBP15.88■□□□□ 0.13
BRCA1-222ENST00000493919 TONSLQ96HA7 1378 aa15.88■□□□□ 0.13
BRCA1-222ENST00000493919 PIK3R4Q99570 1358 aa15.88■□□□□ 0.13
BRCA1-222ENST00000493919 PTPRUQ92729 1446 aa15.87■□□□□ 0.13
BRCA1-222ENST00000493919 XRN1Q8IZH2 1706 aaKnown RBP15.87■□□□□ 0.13
BRCA1-222ENST00000493919 LRRC7Q96NW7 1537 aa15.87■□□□□ 0.13
BRCA1-222ENST00000493919 L3MBTL2Q969R5 705 aa15.86■□□□□ 0.13
BRCA1-222ENST00000493919 ASXL1Q8IXJ9 1541 aa15.86■□□□□ 0.13
BRCA1-222ENST00000493919 HAP1P54257 671 aaPredicted RBP15.86■□□□□ 0.13
BRCA1-222ENST00000493919 RBM33Q96EV2 1170 aaKnown RBP15.85■□□□□ 0.13
BRCA1-222ENST00000493919 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.85■□□□□ 0.13
BRCA1-222ENST00000493919 AMOTL2Q9Y2J4 779 aa15.85■□□□□ 0.13
BRCA1-222ENST00000493919 CFAP70Q5T0N1 1121 aa15.84■□□□□ 0.13
BRCA1-222ENST00000493919 HSP90B1P14625 803 aaKnown RBP15.84■□□□□ 0.13
BRCA1-222ENST00000493919 KCNA4P22459 653 aa15.84■□□□□ 0.13
BRCA1-222ENST00000493919 TMEM132EQ6IEE7 984 aa15.83■□□□□ 0.12
BRCA1-222ENST00000493919 PROSER2Q86WR7 435 aaPredicted RBP15.83■□□□□ 0.12
BRCA1-222ENST00000493919 STAC3Q96MF2 364 aa15.83■□□□□ 0.12
BRCA1-222ENST00000493919 TMEM94Q12767 1356 aa15.83■□□□□ 0.12
BRCA1-222ENST00000493919 XIRP1Q702N8 1843 aaKnown RBP15.83■□□□□ 0.12
BRCA1-222ENST00000493919 CDK11BP21127 795 aaKnown RBP15.82■□□□□ 0.12
BRCA1-222ENST00000493919 PRAG1Q86YV5 1406 aa15.82■□□□□ 0.12
BRCA1-222ENST00000493919 C14orf93Q9H972 538 aaKnown RBP15.82■□□□□ 0.12
BRCA1-222ENST00000493919 STK26Q9P289 416 aa15.82■□□□□ 0.12
BRCA1-222ENST00000493919 IQSEC2Q5JU85 1478 aa15.81■□□□□ 0.12
BRCA1-222ENST00000493919 BCCIPQ9P287 314 aaKnown RBP eCLIP15.81■□□□□ 0.12
BRCA1-222ENST00000493919 YTHDC2Q9H6S0 1430 aaKnown RBP15.79■□□□□ 0.12
BRCA1-222ENST00000493919 NAP1L5Q96NT1 182 aaPredicted RBP15.79■□□□□ 0.12
BRCA1-222ENST00000493919 KNDC1Q76NI1 1749 aa15.79■□□□□ 0.12
BRCA1-222ENST00000493919 PTCH1Q13635 1447 aa15.79■□□□□ 0.12
BRCA1-222ENST00000493919 ADGRB1O14514 1584 aa15.79■□□□□ 0.12
BRCA1-222ENST00000493919 KIAA1210Q9ULL0 1709 aa15.78■□□□□ 0.12
BRCA1-222ENST00000493919 LRPPRCP42704 1394 aaKnown RBP15.78■□□□□ 0.12
BRCA1-222ENST00000493919 ROBO2Q9HCK4 1378 aa15.78■□□□□ 0.12
BRCA1-222ENST00000493919 TRPM1Q7Z4N2 1603 aa15.77■□□□□ 0.11
BRCA1-222ENST00000493919 MSH6P52701 1360 aa15.76■□□□□ 0.11
BRCA1-222ENST00000493919 NALCNQ8IZF0 1738 aa15.76■□□□□ 0.11
BRCA1-222ENST00000493919 UBAP1LF5GYI3 381 aa15.75■□□□□ 0.11
BRCA1-222ENST00000493919 TECPR2O15040 1411 aa15.75■□□□□ 0.11
BRCA1-222ENST00000493919 ABCC11Q96J66 1382 aa15.74■□□□□ 0.11
BRCA1-222ENST00000493919 NBPF1Q3BBV0 1214 aa15.73■□□□□ 0.11
BRCA1-222ENST00000493919 TRAK1Q9UPV9 953 aa15.73■□□□□ 0.11
BRCA1-222ENST00000493919 VSIG10Q8N0Z9 540 aa15.72■□□□□ 0.11
BRCA1-222ENST00000493919 ROCK2O75116 1388 aaKnown RBP15.72■□□□□ 0.11
BRCA1-222ENST00000493919 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.72■□□□□ 0.11
BRCA1-222ENST00000493919 NBPF8Q3BBV2 869 aa15.72■□□□□ 0.11
BRCA1-222ENST00000493919 PLEKHH1Q9ULM0 1364 aa15.72■□□□□ 0.11
BRCA1-222ENST00000493919 ADGRL3Q9HAR2 1447 aa15.72■□□□□ 0.11
BRCA1-222ENST00000493919 ARHGEF28Q8N1W1 1705 aaKnown RBP15.71■□□□□ 0.11
BRCA1-222ENST00000493919 SAFB2Q14151 953 aaKnown RBP eCLIP15.71■□□□□ 0.111e-6■□□□□ 10.7
BRCA1-222ENST00000493919 PAXIP1Q6ZW49 1069 aaPredicted RBP15.71■□□□□ 0.11
BRCA1-222ENST00000493919 WAPLQ7Z5K2 1190 aa15.71■□□□□ 0.11
BRCA1-222ENST00000493919 NCOA3Q9Y6Q9 1424 aa15.71■□□□□ 0.11
BRCA1-222ENST00000493919 DLC1Q96QB1 1528 aa15.7■□□□□ 0.1
BRCA1-222ENST00000493919 PIP4K2BP78356 416 aa15.7■□□□□ 0.1
BRCA1-222ENST00000493919 FBXO41Q8TF61 875 aa15.7■□□□□ 0.1
BRCA1-222ENST00000493919 TOM1O60784 492 aa15.7■□□□□ 0.1
BRCA1-222ENST00000493919 PRAM1Q96QH2 718 aa15.7■□□□□ 0.1
BRCA1-222ENST00000493919 RALGAPBQ86X10 1494 aa15.69■□□□□ 0.1
BRCA1-222ENST00000493919 FAM135BQ49AJ0 1406 aa15.69■□□□□ 0.1
BRCA1-222ENST00000493919 POGKQ9P215 609 aa15.69■□□□□ 0.1
BRCA1-222ENST00000493919 ATF3P18847 181 aa15.68■□□□□ 0.1
BRCA1-222ENST00000493919 C19orf44Q9H6X5 657 aa15.68■□□□□ 0.1
BRCA1-222ENST00000493919 SUPT16HQ9Y5B9 1047 aaKnown RBP15.68■□□□□ 0.1
BRCA1-222ENST00000493919 DCCP43146 1447 aa15.67■□□□□ 0.1
BRCA1-222ENST00000493919 DIEXFQ68CQ4 756 aaKnown RBP15.66■□□□□ 0.1
BRCA1-222ENST00000493919 CADPS2Q86UW7 1296 aa15.66■□□□□ 0.1
BRCA1-222ENST00000493919 CDC42BPGQ6DT37 1551 aa15.66■□□□□ 0.1
BRCA1-222ENST00000493919 CARD11Q9BXL7 1154 aa15.64■□□□□ 0.09
BRCA1-222ENST00000493919 ROBO1Q9Y6N7 1651 aa15.63■□□□□ 0.09
BRCA1-222ENST00000493919 MINK1Q8N4C8 1332 aaPredicted RBP15.63■□□□□ 0.09
BRCA1-222ENST00000493919 ILDR1Q86SU0 546 aaPredicted RBP15.63■□□□□ 0.09
BRCA1-222ENST00000493919 SIRT1Q96EB6 747 aa15.63■□□□□ 0.09
BRCA1-222ENST00000493919 HIRIP3Q9BW71 556 aaPredicted RBP15.63■□□□□ 0.09
BRCA1-222ENST00000493919 GPRASP1Q5JY77 1395 aa15.63■□□□□ 0.09
BRCA1-222ENST00000493919 QRICH2Q9H0J4 1663 aa15.63■□□□□ 0.09
BRCA1-222ENST00000493919 FANCIQ9NVI1 1328 aa15.63■□□□□ 0.09
BRCA1-222ENST00000493919 EIF3AQ14152 1382 aaKnown RBP15.62■□□□□ 0.09
BRCA1-222ENST00000493919 SLAIN2Q9P270 581 aa15.62■□□□□ 0.09
BRCA1-222ENST00000493919 MST1RQ04912 1400 aa15.62■□□□□ 0.09
BRCA1-222ENST00000493919 ADGRB2O60241 1585 aa15.61■□□□□ 0.09
BRCA1-222ENST00000493919 NUTM2FA1L443 756 aa15.61■□□□□ 0.09
BRCA1-222ENST00000493919 FMN2Q9NZ56 1722 aa15.61■□□□□ 0.09
BRCA1-222ENST00000493919 CENPJQ9HC77 1338 aaPredicted RBP15.6■□□□□ 0.09
BRCA1-222ENST00000493919 C1orf167Q5SNV9 1468 aa15.58■□□□□ 0.08
BRCA1-222ENST00000493919 NAP1L2Q9ULW6 460 aaPredicted RBP15.57■□□□□ 0.08
BRCA1-222ENST00000493919 HMGB1P09429 215 aaKnown RBP15.56■□□□□ 0.08
BRCA1-222ENST00000493919 RBM19Q9Y4C8 960 aaKnown RBP15.56■□□□□ 0.08
BRCA1-222ENST00000493919 BRINP3Q76B58 766 aa15.55■□□□□ 0.08
BRCA1-222ENST00000493919 TMEM132AQ24JP5 1023 aa15.55■□□□□ 0.08
BRCA1-222ENST00000493919 USP47Q96K76 1375 aa15.54■□□□□ 0.08
BRCA1-222ENST00000493919 RGPD8O14715 1765 aaPredicted RBP15.54■□□□□ 0.08
BRCA1-222ENST00000493919 ESCO1Q5FWF5 840 aa15.54■□□□□ 0.08
BRCA1-222ENST00000493919 IPO4Q8TEX9 1081 aaKnown RBP15.54■□□□□ 0.08
BRCA1-222ENST00000493919 TULP4Q9NRJ4 1543 aa15.54■□□□□ 0.08
BRCA1-222ENST00000493919 PHLPP1O60346 1717 aa15.53■□□□□ 0.08
BRCA1-222ENST00000493919 USP32Q8NFA0 1604 aa15.53■□□□□ 0.08
BRCA1-222ENST00000493919 WASLO00401 505 aaPredicted RBP15.53■□□□□ 0.08
BRCA1-222ENST00000493919 HSPA1LP34931 641 aa15.53■□□□□ 0.08
BRCA1-222ENST00000493919 ORAI2Q96SN7 254 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms